RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 OR2D3Q8NGH3 330 aa10.42□□□□□ -0.74
USB1-207ENST00000563149 GTSF1Q8WW33 167 aa10.42□□□□□ -0.74
USB1-207ENST00000563149 ABHD17AQ96GS6 310 aa10.42□□□□□ -0.74
USB1-207ENST00000563149 TMEM70Q9BUB7 260 aa10.42□□□□□ -0.74
USB1-207ENST00000563149 SLC25A39Q9BZJ4 359 aaPredicted RBP10.42□□□□□ -0.74
USB1-207ENST00000563149 I3L2K1 104 aa10.42□□□□□ -0.74
USB1-207ENST00000563149 HAX1O00165 279 aa10.42□□□□□ -0.74
USB1-207ENST00000563149 CRXO43186 299 aaPredicted RBP10.42□□□□□ -0.74
USB1-207ENST00000563149 OR5AL1P0C617 328 aa10.42□□□□□ -0.74
USB1-207ENST00000563149 LYPD1Q8N2G4 141 aa10.42□□□□□ -0.74
USB1-207ENST00000563149 SRSF12Q8WXF0 261 aaKnown RBP10.42□□□□□ -0.74
USB1-207ENST00000563149 URB1-AS1Q96HZ7 61 aa10.42□□□□□ -0.74
USB1-207ENST00000563149 RASL11BQ9BPW5 248 aa10.42□□□□□ -0.74
USB1-207ENST00000563149 SCNM1Q9BWG6 230 aa10.42□□□□□ -0.74
USB1-207ENST00000563149 TSPOP30536 169 aa10.41□□□□□ -0.74
USB1-207ENST00000563149 LYZP61626 148 aa10.41□□□□□ -0.74
USB1-207ENST00000563149 RPEQ96AT9 228 aa10.41□□□□□ -0.74
USB1-207ENST00000563149 PGLYRP4Q96LB8 373 aa10.41□□□□□ -0.74
USB1-207ENST00000563149 SGK494Q96LW2 274 aa10.41□□□□□ -0.74
USB1-207ENST00000563149 SVILO95425 2214 aa10.4□□□□□ -0.74
USB1-207ENST00000563149 CD3EP07766 207 aa10.4□□□□□ -0.74
USB1-207ENST00000563149 COL8A1P27658 744 aa10.4□□□□□ -0.74
USB1-207ENST00000563149 Q56UQ5 140 aa10.4□□□□□ -0.74
USB1-207ENST00000563149 LCN12Q6JVE5 192 aa10.4□□□□□ -0.74
USB1-207ENST00000563149 S100A7AQ86SG5 101 aa10.4□□□□□ -0.74
USB1-207ENST00000563149 TMEM75Q8N9X5 138 aa10.4□□□□□ -0.74
USB1-207ENST00000563149 Q8NA96 180 aa10.4□□□□□ -0.74
USB1-207ENST00000563149 GATD1Q8NB37 220 aa10.4□□□□□ -0.74
USB1-207ENST00000563149 PPP1R14DQ9NXH3 145 aa10.4□□□□□ -0.74
USB1-207ENST00000563149 MUC3AQ02505 3323 aa10.4□□□□□ -0.75
USB1-207ENST00000563149 LOC102724200A0A096LPH7 203 aaPredicted RBP10.39□□□□□ -0.75
USB1-207ENST00000563149 IGHV3-21A0A0B4J1V1 117 aa10.39□□□□□ -0.75
USB1-207ENST00000563149 PPIAL4CA0A0B4J2A2 164 aa10.39□□□□□ -0.75
USB1-207ENST00000563149 A0A1B0GW15 77 aa10.39□□□□□ -0.75
USB1-207ENST00000563149 LY6LH3BQJ8 138 aa10.39□□□□□ -0.75
USB1-207ENST00000563149 CHEK1O14757 476 aa10.39□□□□□ -0.75
USB1-207ENST00000563149 PPIAL4GP0DN37 164 aa10.39□□□□□ -0.75
USB1-207ENST00000563149 BPIFA4PQ86YQ2 179 aa10.39□□□□□ -0.75
USB1-207ENST00000563149 FBXL15Q9H469 300 aa10.39□□□□□ -0.75
USB1-207ENST00000563149 H3BRN7 92 aa10.39□□□□□ -0.75
USB1-207ENST00000563149 K7EQM0 130 aa10.39□□□□□ -0.75
USB1-207ENST00000563149 IGLV2-11P01706 119 aa10.39□□□□□ -0.75
USB1-207ENST00000563149 NPSP0C0P6 89 aa10.39□□□□□ -0.75
USB1-207ENST00000563149 FAM120AOSQ5T036 256 aa10.39□□□□□ -0.75
USB1-207ENST00000563149 LEMD1Q68G75 181 aa10.39□□□□□ -0.75
USB1-207ENST00000563149 OR4F17Q8NGA8 305 aa10.39□□□□□ -0.75
USB1-207ENST00000563149 SHANK2-AS3Q9BTD1 123 aa10.39□□□□□ -0.75
USB1-207ENST00000563149 SH3BGRL2Q9UJC5 107 aa10.39□□□□□ -0.75
USB1-207ENST00000563149 PLCE1Q9P212 2302 aa10.38□□□□□ -0.75
USB1-207ENST00000563149 TRBV19A0A075B6N1 114 aa10.38□□□□□ -0.75
USB1-207ENST00000563149 LEPROTL1O95214 131 aa10.38□□□□□ -0.75
USB1-207ENST00000563149 APOHP02749 345 aaPredicted RBP10.38□□□□□ -0.75
USB1-207ENST00000563149 LIPFP07098 398 aa10.38□□□□□ -0.75
USB1-207ENST00000563149 IGLL1P15814 213 aa10.38□□□□□ -0.75
USB1-207ENST00000563149 PLGLAQ15195 96 aa10.38□□□□□ -0.75
USB1-207ENST00000563149 LHFPL4Q7Z7J7 247 aa10.38□□□□□ -0.75
USB1-207ENST00000563149 ATOH7Q8N100 152 aa10.38□□□□□ -0.75
USB1-207ENST00000563149 STPG4Q8N801 248 aa10.38□□□□□ -0.75
USB1-207ENST00000563149 ORAOV1Q8WV07 137 aa10.38□□□□□ -0.75
USB1-207ENST00000563149 GSX1Q9H4S2 264 aaPredicted RBP10.38□□□□□ -0.75
USB1-207ENST00000563149 ST20Q9HBF5 79 aa10.38□□□□□ -0.75
USB1-207ENST00000563149 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.37□□□□□ -0.75
USB1-207ENST00000563149 IGHV1-24A0A0C4DH33 117 aa10.37□□□□□ -0.75
USB1-207ENST00000563149 SYS1-DBNDD2H3BUS1 97 aa10.37□□□□□ -0.75
USB1-207ENST00000563149 IGKV1-17P01599 117 aa10.37□□□□□ -0.75
USB1-207ENST00000563149 APELAP0DMC3 54 aa10.37□□□□□ -0.75
USB1-207ENST00000563149 TFPI2P48307 235 aa10.37□□□□□ -0.75
USB1-207ENST00000563149 RIGQ13278 110 aa10.37□□□□□ -0.75
USB1-207ENST00000563149 Q6AWC8 147 aa10.37□□□□□ -0.75
USB1-207ENST00000563149 GOLT1AQ6ZVE7 132 aa10.37□□□□□ -0.75
USB1-207ENST00000563149 PRNTQ86SH4 94 aa10.37□□□□□ -0.75
USB1-207ENST00000563149 CIARTQ8N365 385 aaPredicted RBP10.37□□□□□ -0.75
USB1-207ENST00000563149 VKORC1Q9BQB6 163 aa10.37□□□□□ -0.75
USB1-207ENST00000563149 ICE1Q9Y2F5 2266 aa10.37□□□□□ -0.75
USB1-207ENST00000563149 TRAV30A0A087WSZ9 112 aa10.37□□□□□ -0.75
USB1-207ENST00000563149 OR4C46A6NHA9 309 aa10.37□□□□□ -0.75
USB1-207ENST00000563149 H3BTX0 84 aa10.37□□□□□ -0.75
USB1-207ENST00000563149 K7EIM0 57 aa10.37□□□□□ -0.75
USB1-207ENST00000563149 PET117Q6UWS5 81 aa10.37□□□□□ -0.75
USB1-207ENST00000563149 LY6G5BQ8NDX9 201 aa10.37□□□□□ -0.75
USB1-207ENST00000563149 TMEM191AQ9H0A3 160 aa10.37□□□□□ -0.75
USB1-207ENST00000563149 RAB1BQ9H0U4 201 aa10.37□□□□□ -0.75
USB1-207ENST00000563149 A0A1B0GUT8 65 aa10.36□□□□□ -0.75
USB1-207ENST00000563149 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.36□□□□□ -0.75
USB1-207ENST00000563149 NDUFB8O95169 186 aa10.36□□□□□ -0.75
USB1-207ENST00000563149 CNIH1O95406 144 aa10.36□□□□□ -0.75
USB1-207ENST00000563149 MAJINQ3KP22 176 aa10.36□□□□□ -0.75
USB1-207ENST00000563149 EXOC3-AS1Q8N2X6 119 aa10.36□□□□□ -0.75
USB1-207ENST00000563149 MUC15Q8N387 334 aa10.36□□□□□ -0.75
USB1-207ENST00000563149 CLEC5AQ9NY25 188 aa10.36□□□□□ -0.75
USB1-207ENST00000563149 OTOGLQ3ZCN5 2332 aa10.36□□□□□ -0.75
USB1-207ENST00000563149 TRAV8-1A0A0A6YYK1 113 aa10.35□□□□□ -0.75
USB1-207ENST00000563149 SERTM2A0A1B0GWG4 89 aa10.35□□□□□ -0.75
USB1-207ENST00000563149 WI2-2373I1.2A0A1W2PRP0 233 aa10.35□□□□□ -0.75
USB1-207ENST00000563149 SIAH2O43255 324 aa10.35□□□□□ -0.75
USB1-207ENST00000563149 COX7A1P24310 79 aa10.35□□□□□ -0.75
USB1-207ENST00000563149 PDE6HQ13956 83 aa10.35□□□□□ -0.75
USB1-207ENST00000563149 PSG3Q16557 428 aa10.35□□□□□ -0.75
USB1-207ENST00000563149 SIGLEC15Q6ZMC9 328 aa10.35□□□□□ -0.75
USB1-207ENST00000563149 ARL6IP6Q8N6S5 226 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms