RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 ROCK1Q13464 1354 aa1.43□□□□□ -2.18
DENND4A-204ENST00000562028 KTN1Q86UP2 1357 aaKnown RBP1.43□□□□□ -2.18
DENND4A-204ENST00000562028 USP9YO00507 2555 aaPredicted RBP1.43□□□□□ -2.18
DENND4A-204ENST00000562028 MYOFQ9NZM1 2061 aa1.43□□□□□ -2.18
DENND4A-204ENST00000562028 TSC2P49815 1807 aa1.43□□□□□ -2.18
DENND4A-204ENST00000562028 LRRK2Q5S007 2527 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 NOTCH1P46531 2555 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 IGKV3-7A0A075B6H7 116 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 SMIM23A6NLE4 172 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 I3L521 148 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 M0QZ92 97 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 KRT7P08729 469 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 S100A7P31151 101 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 OR4D2P58180 307 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 MAGOHP61326 146 aaKnown RBP1.42□□□□□ -2.18
DENND4A-204ENST00000562028 MRPS15P82914 257 aaKnown RBP1.42□□□□□ -2.18
DENND4A-204ENST00000562028 RGS21Q2M5E4 152 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 C1orf195Q5TG92 126 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 FAM173BQ6P4H8 233 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 ZNF676Q8N7Q3 588 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 C9orf163Q8N9P6 203 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 OR1M1Q8NGA1 313 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 TESCQ96BS2 214 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 DIRAS2Q96HU8 199 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 ADAT1Q9BUB4 502 aaKnown RBP1.42□□□□□ -2.18
DENND4A-204ENST00000562028 OR8D2Q9GZM6 311 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 HEATR5BQ9P2D3 2071 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 ARAP2Q8WZ64 1704 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 ATG2AQ2TAZ0 1938 aa1.42□□□□□ -2.18
DENND4A-204ENST00000562028 RYR2Q92736 4967 aa1.41□□□□□ -2.18
DENND4A-204ENST00000562028 TRBV10-2A0A0K0K1G8 114 aa1.41□□□□□ -2.18
DENND4A-204ENST00000562028 TRAPPC2LH3BP13 241 aa1.41□□□□□ -2.18
DENND4A-204ENST00000562028 SLC16A4O15374 487 aa1.41□□□□□ -2.18
DENND4A-204ENST00000562028 C1QAP02745 245 aa1.41□□□□□ -2.18
DENND4A-204ENST00000562028 SRP19P09132 144 aaKnown RBP1.41□□□□□ -2.18
DENND4A-204ENST00000562028 CCR7P32248 378 aa1.41□□□□□ -2.18
DENND4A-204ENST00000562028 MAP2K4P45985 399 aa1.41□□□□□ -2.18
DENND4A-204ENST00000562028 CAV1Q03135 178 aa1.41□□□□□ -2.18
DENND4A-204ENST00000562028 EMX1Q04741 257 aaPredicted RBP1.41□□□□□ -2.18
DENND4A-204ENST00000562028 CLVS2Q5SYC1 327 aa1.41□□□□□ -2.18
DENND4A-204ENST00000562028 OGFRL1Q5TC84 451 aaPredicted RBP1.41□□□□□ -2.18
DENND4A-204ENST00000562028 UCK1Q9HA47 277 aa1.41□□□□□ -2.18
DENND4A-204ENST00000562028 FGFR1OP2Q9NVK5 253 aa1.41□□□□□ -2.18
DENND4A-204ENST00000562028 USE1Q9NZ43 259 aa1.41□□□□□ -2.18
DENND4A-204ENST00000562028 HEATR5AQ86XA9 2040 aa1.4□□□□□ -2.18
DENND4A-204ENST00000562028 MTORP42345 2549 aa1.4□□□□□ -2.18
DENND4A-204ENST00000562028 VWFP04275 2813 aa1.4□□□□□ -2.18
DENND4A-204ENST00000562028 CDK5RAP2Q96SN8 1893 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 RTL1A6NKG5 1358 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 IBA57-AS1B1ANH7 110 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 H0Y980 276 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 GOLGA6L19H0YKK7 550 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 SULT1A3P0DMM9 295 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 SULT1A4P0DMN0 295 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 FGF6P10767 208 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 CYBAP13498 195 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 UCHL3P15374 230 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 HLA-DMBP28068 263 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 MAGEA2P43356 314 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 CTAG1AP78358 180 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 NDUFA5Q16718 116 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 DEFB125Q8N687 156 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 V9GYY5 206 aaPredicted RBP1.4□□□□□ -2.19
DENND4A-204ENST00000562028 CUBNO60494 3623 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 DCHS2Q6V1P9 2916 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 HERC2O95714 4834 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 FANCMQ8IYD8 2048 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 DOCK3Q8IZD9 2030 aa1.4□□□□□ -2.19
DENND4A-204ENST00000562028 PRRC2CQ9Y520 2896 aaKnown RBP1.4□□□□□ -2.19
DENND4A-204ENST00000562028 CENPEQ02224 2701 aa1.39□□□□□ -2.19
DENND4A-204ENST00000562028 ANKHD1Q8IWZ3 2542 aaKnown RBP1.39□□□□□ -2.19
DENND4A-204ENST00000562028 HIVEP3Q5T1R4 2406 aa1.39□□□□□ -2.19
DENND4A-204ENST00000562028 LRRN3E7EW58 273 aa1.39□□□□□ -2.19
DENND4A-204ENST00000562028 SLC22A1O15245 554 aa1.39□□□□□ -2.19
DENND4A-204ENST00000562028 NOS1APO75052 506 aaPredicted RBP1.39□□□□□ -2.19
DENND4A-204ENST00000562028 DEXIO95424 95 aa1.39□□□□□ -2.19
DENND4A-204ENST00000562028 KCNE1P15382 129 aa1.39□□□□□ -2.19
DENND4A-204ENST00000562028 NFYAP23511 347 aaPredicted RBP1.39□□□□□ -2.19
DENND4A-204ENST00000562028 S100A5P33763 92 aa1.39□□□□□ -2.19
DENND4A-204ENST00000562028 REG1BP48304 166 aa1.39□□□□□ -2.19
DENND4A-204ENST00000562028 MARCKSL1P49006 195 aa1.39□□□□□ -2.19
DENND4A-204ENST00000562028 NAA20P61599 178 aa1.39□□□□□ -2.19
DENND4A-204ENST00000562028 CDK5R1Q15078 307 aa1.39□□□□□ -2.19
DENND4A-204ENST00000562028 OR8B3Q8NGG8 313 aa1.39□□□□□ -2.19
DENND4A-204ENST00000562028 CHMP6Q96FZ7 201 aa1.39□□□□□ -2.19
DENND4A-204ENST00000562028 ERMAPQ96PL5 475 aaPredicted RBP1.39□□□□□ -2.19
DENND4A-204ENST00000562028 SMR3AQ99954 134 aa1.39□□□□□ -2.19
DENND4A-204ENST00000562028 PSTPIP2Q9H939 334 aa1.39□□□□□ -2.19
DENND4A-204ENST00000562028 PAQR5Q9NXK6 330 aaPredicted RBP1.39□□□□□ -2.19
DENND4A-204ENST00000562028 FUT9Q9Y231 359 aa1.39□□□□□ -2.19
DENND4A-204ENST00000562028 PATJQ8NI35 1801 aa1.38□□□□□ -2.19
DENND4A-204ENST00000562028 APCP25054 2843 aa1.38□□□□□ -2.19
DENND4A-204ENST00000562028 ASXL3Q9C0F0 2248 aa1.38□□□□□ -2.19
DENND4A-204ENST00000562028 C21orf140B9A014 251 aa1.38□□□□□ -2.19
DENND4A-204ENST00000562028 SULT1B1O43704 296 aa1.38□□□□□ -2.19
DENND4A-204ENST00000562028 IGHV3-7P01780 117 aa1.38□□□□□ -2.19
DENND4A-204ENST00000562028 CEBPGP53567 150 aa1.38□□□□□ -2.19
DENND4A-204ENST00000562028 FXYD2P54710 66 aa1.38□□□□□ -2.19
DENND4A-204ENST00000562028 FADDQ13158 208 aa1.38□□□□□ -2.19
DENND4A-204ENST00000562028 DHFR2Q86XF0 187 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms