RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 CROCCP3Q8IVE0 287 aa8.15□□□□□ -1.1
NSMCE1-202ENST00000561960 OR8I2Q8N0Y5 310 aa8.15□□□□□ -1.1
NSMCE1-202ENST00000561960 ZNF486Q96H40 463 aaPredicted RBP8.15□□□□□ -1.1
NSMCE1-202ENST00000561960 C17orf77Q96MU5 243 aa8.15□□□□□ -1.1
NSMCE1-202ENST00000561960 RTBDNQ9BSG5 229 aaPredicted RBP8.15□□□□□ -1.1
NSMCE1-202ENST00000561960 RSG1Q9BU20 258 aa8.15□□□□□ -1.1
NSMCE1-202ENST00000561960 NAA60Q9H7X0 242 aa8.15□□□□□ -1.1
NSMCE1-202ENST00000561960 DOK5Q9P104 306 aa8.15□□□□□ -1.1
NSMCE1-202ENST00000561960 SRRM2Q9UQ35 2752 aaKnown RBP8.15□□□□□ -1.11
NSMCE1-202ENST00000561960 FLG2Q5D862 2391 aaPredicted RBP8.14□□□□□ -1.11
NSMCE1-202ENST00000561960 PLAC8L1A1L4L8 177 aa8.14□□□□□ -1.11
NSMCE1-202ENST00000561960 CRXO43186 299 aaPredicted RBP8.14□□□□□ -1.11
NSMCE1-202ENST00000561960 RAB3DO95716 219 aa8.14□□□□□ -1.11
NSMCE1-202ENST00000561960 APOA1P02647 267 aa8.14□□□□□ -1.11
NSMCE1-202ENST00000561960 IAPPP10997 89 aa8.14□□□□□ -1.11
NSMCE1-202ENST00000561960 CNN1P51911 297 aaKnown RBP8.14□□□□□ -1.11
NSMCE1-202ENST00000561960 SUPT4H1P63272 117 aaKnown RBP8.14□□□□□ -1.11
NSMCE1-202ENST00000561960 HAMPP81172 84 aa8.14□□□□□ -1.11
NSMCE1-202ENST00000561960 OXA1LQ15070 435 aa8.14□□□□□ -1.11
NSMCE1-202ENST00000561960 NMSQ5H8A3 153 aa8.14□□□□□ -1.11
NSMCE1-202ENST00000561960 OR11H7Q8NGC8 314 aa8.14□□□□□ -1.11
NSMCE1-202ENST00000561960 TERB2Q8NHR7 220 aa8.14□□□□□ -1.11
NSMCE1-202ENST00000561960 ZFAND1Q8TCF1 268 aa8.14□□□□□ -1.11
NSMCE1-202ENST00000561960 RBPMSQ93062 196 aaKnown RBP8.14□□□□□ -1.11
NSMCE1-202ENST00000561960 IGF2BP2-AS1Q96M15 143 aa8.14□□□□□ -1.11
NSMCE1-202ENST00000561960 Q9H521 79 aa8.14□□□□□ -1.11
NSMCE1-202ENST00000561960 RPRMQ9NS64 109 aa8.14□□□□□ -1.11
NSMCE1-202ENST00000561960 EXTL2Q9UBQ6 330 aa8.14□□□□□ -1.11
NSMCE1-202ENST00000561960 CDS2O95674 445 aa8.13□□□□□ -1.11
NSMCE1-202ENST00000561960 INSP01308 110 aa8.13□□□□□ -1.11
NSMCE1-202ENST00000561960 SNRPCP09234 159 aaKnown RBP8.13□□□□□ -1.11
NSMCE1-202ENST00000561960 PAX9P55771 341 aa8.13□□□□□ -1.11
NSMCE1-202ENST00000561960 CCL18P55774 89 aa8.13□□□□□ -1.11
NSMCE1-202ENST00000561960 OR5I1Q13606 314 aa8.13□□□□□ -1.11
NSMCE1-202ENST00000561960 ETFRF1Q6IPR1 90 aa8.13□□□□□ -1.11
NSMCE1-202ENST00000561960 FAM219AQ8IW50 185 aa8.13□□□□□ -1.11
NSMCE1-202ENST00000561960 LGI3Q8N145 548 aa8.13□□□□□ -1.11
NSMCE1-202ENST00000561960 OR4C16Q8NGL9 310 aa8.13□□□□□ -1.11
NSMCE1-202ENST00000561960 OR52E5Q8NH55 327 aa8.13□□□□□ -1.11
NSMCE1-202ENST00000561960 DTD1Q8TEA8 209 aa8.13□□□□□ -1.11
NSMCE1-202ENST00000561960 ABHD1Q96SE0 405 aa8.13□□□□□ -1.11
NSMCE1-202ENST00000561960 SEPSECSQ9HD40 501 aaKnown RBP8.13□□□□□ -1.11
NSMCE1-202ENST00000561960 C14orf166Q9Y224 244 aaKnown RBP8.13□□□□□ -1.11
NSMCE1-202ENST00000561960 IGKV1OR2-108A0A075B7D4 117 aa8.12□□□□□ -1.11
NSMCE1-202ENST00000561960 EPM2AB3EWF7 344 aa8.12□□□□□ -1.11
NSMCE1-202ENST00000561960 ISLRO14498 428 aa8.12□□□□□ -1.11
NSMCE1-202ENST00000561960 SULT1A3P0DMM9 295 aa8.12□□□□□ -1.11
NSMCE1-202ENST00000561960 SULT1A4P0DMN0 295 aa8.12□□□□□ -1.11
NSMCE1-202ENST00000561960 INAFM2P0DMQ5 153 aa8.12□□□□□ -1.11
NSMCE1-202ENST00000561960 AARDQ4LEZ3 155 aa8.12□□□□□ -1.11
NSMCE1-202ENST00000561960 STEAP1BQ6NZ63 245 aa8.12□□□□□ -1.11
NSMCE1-202ENST00000561960 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.12□□□□□ -1.11
NSMCE1-202ENST00000561960 TMEM182Q6ZP80 229 aaPredicted RBP8.12□□□□□ -1.11
NSMCE1-202ENST00000561960 SLC35E1Q96K37 410 aa8.12□□□□□ -1.11
NSMCE1-202ENST00000561960 LINC01587Q99440 93 aa8.12□□□□□ -1.11
NSMCE1-202ENST00000561960 PARD6GQ9BYG4 376 aaPredicted RBP8.12□□□□□ -1.11
NSMCE1-202ENST00000561960 NAA50Q9GZZ1 169 aaKnown RBP8.12□□□□□ -1.11
NSMCE1-202ENST00000561960 Q9H8V8 135 aa8.12□□□□□ -1.11
NSMCE1-202ENST00000561960 NOP10Q9NPE3 64 aaKnown RBP8.12□□□□□ -1.11
NSMCE1-202ENST00000561960 ZNF586Q9NXT0 402 aa8.12□□□□□ -1.11
NSMCE1-202ENST00000561960 TRAV26-1A0A087WT03 109 aa8.11□□□□□ -1.11
NSMCE1-202ENST00000561960 TRAV8-2A0A0B4J237 113 aa8.11□□□□□ -1.11
NSMCE1-202ENST00000561960 CRYM-AS1A6NIL9 109 aa8.11□□□□□ -1.11
NSMCE1-202ENST00000561960 LYRM9A8MSI8 78 aa8.11□□□□□ -1.11
NSMCE1-202ENST00000561960 ATP5G1P05496 136 aa8.11□□□□□ -1.11
NSMCE1-202ENST00000561960 ORM2P19652 201 aa8.11□□□□□ -1.11
NSMCE1-202ENST00000561960 ATP5G3P48201 142 aa8.11□□□□□ -1.11
NSMCE1-202ENST00000561960 FAM3BP58499 235 aaPredicted RBP8.11□□□□□ -1.11
NSMCE1-202ENST00000561960 RHOBP62745 196 aa8.11□□□□□ -1.11
NSMCE1-202ENST00000561960 HIST1H1AQ02539 215 aaPredicted RBP8.11□□□□□ -1.11
NSMCE1-202ENST00000561960 KIR3DS1Q14943 382 aa8.11□□□□□ -1.11
NSMCE1-202ENST00000561960 OR8G2PQ6IF36 304 aa8.11□□□□□ -1.11
NSMCE1-202ENST00000561960 LYZL2Q7Z4W2 148 aa8.11□□□□□ -1.11
NSMCE1-202ENST00000561960 ZNF738Q8NE65 137 aa8.11□□□□□ -1.11
NSMCE1-202ENST00000561960 FUNDC2Q9BWH2 189 aa8.11□□□□□ -1.11
NSMCE1-202ENST00000561960 MTFP1Q9UDX5 166 aa8.11□□□□□ -1.11
NSMCE1-202ENST00000561960 TNFRSF18Q9Y5U5 241 aa8.11□□□□□ -1.11
NSMCE1-202ENST00000561960 J3KRW8 73 aa8.1□□□□□ -1.11
NSMCE1-202ENST00000561960 TMEM127O75204 238 aa8.1□□□□□ -1.11
NSMCE1-202ENST00000561960 SMR3BP02814 79 aaPredicted RBP8.1□□□□□ -1.11
NSMCE1-202ENST00000561960 GPR107Q5VW38 600 aa8.1□□□□□ -1.11
NSMCE1-202ENST00000561960 TMEM229BQ8NBD8 167 aa8.1□□□□□ -1.11
NSMCE1-202ENST00000561960 OR1B1Q8NGR6 318 aa8.1□□□□□ -1.11
NSMCE1-202ENST00000561960 MDFICQ9P1T7 246 aa8.1□□□□□ -1.11
NSMCE1-202ENST00000561960 SNRPGP15A8MWD9 76 aa8.09□□□□□ -1.11
NSMCE1-202ENST00000561960 GABARAPH6UMI1 98 aa8.09□□□□□ -1.11
NSMCE1-202ENST00000561960 GABARAPO95166 117 aa8.09□□□□□ -1.11
NSMCE1-202ENST00000561960 AKR1C4P17516 323 aa8.09□□□□□ -1.11
NSMCE1-202ENST00000561960 HOXA5P20719 270 aa8.09□□□□□ -1.11
NSMCE1-202ENST00000561960 NUP62P37198 522 aaPredicted RBP8.09□□□□□ -1.11
NSMCE1-202ENST00000561960 GALR1P47211 349 aa8.09□□□□□ -1.11
NSMCE1-202ENST00000561960 TAS2R19P59542 299 aa8.09□□□□□ -1.11
NSMCE1-202ENST00000561960 ESRGQ1W209 222 aa8.09□□□□□ -1.11
NSMCE1-202ENST00000561960 OR1S1Q8NH92 325 aa8.09□□□□□ -1.11
NSMCE1-202ENST00000561960 CLUHP3Q96NS8 147 aa8.09□□□□□ -1.11
NSMCE1-202ENST00000561960 GAGE12BA1L429 117 aa8.08□□□□□ -1.12
NSMCE1-202ENST00000561960 ZNF98A6NK75 572 aa8.08□□□□□ -1.12
NSMCE1-202ENST00000561960 BOLA2-SMG1P6H3BVE0 249 aa8.08□□□□□ -1.12
NSMCE1-202ENST00000561960 GAGE7O76087 117 aa8.08□□□□□ -1.12
NSMCE1-202ENST00000561960 GAGE12FP0CL80 117 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms