RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 INSL4Q14641 139 aa6.39□□□□□ -1.39
PALB2-202ENST00000561514 PLGLAQ15195 96 aa6.39□□□□□ -1.39
PALB2-202ENST00000561514 SRSF7Q16629 238 aaKnown RBP eCLIP6.39□□□□□ -1.39
PALB2-202ENST00000561514 MRGPRG-AS1Q2M3A8 158 aa6.39□□□□□ -1.39
PALB2-202ENST00000561514 ZFAND6Q6FIF0 208 aa6.39□□□□□ -1.39
PALB2-202ENST00000561514 ZNF343Q6P1L6 599 aa6.39□□□□□ -1.39
PALB2-202ENST00000561514 TOMM20LQ6UXN7 152 aa6.39□□□□□ -1.39
PALB2-202ENST00000561514 LINC00322Q6ZN03 302 aaPredicted RBP6.39□□□□□ -1.39
PALB2-202ENST00000561514 TMED4Q7Z7H5 227 aa6.39□□□□□ -1.39
PALB2-202ENST00000561514 NR2C2APQ86WQ0 139 aa6.39□□□□□ -1.39
PALB2-202ENST00000561514 OR10W1Q8NGF6 305 aa6.39□□□□□ -1.39
PALB2-202ENST00000561514 OR52B4Q8NGK2 314 aa6.39□□□□□ -1.39
PALB2-202ENST00000561514 OR4C16Q8NGL9 310 aa6.39□□□□□ -1.39
PALB2-202ENST00000561514 OR9G4Q8NGQ1 327 aa6.39□□□□□ -1.39
PALB2-202ENST00000561514 OR2K2Q8NGT1 345 aa6.39□□□□□ -1.39
PALB2-202ENST00000561514 LGALS14Q8TCE9 139 aa6.39□□□□□ -1.39
PALB2-202ENST00000561514 FRZBQ92765 325 aa6.39□□□□□ -1.39
PALB2-202ENST00000561514 MS4A10Q96PG2 267 aa6.39□□□□□ -1.39
PALB2-202ENST00000561514 CIB3Q96Q77 187 aaPredicted RBP6.39□□□□□ -1.39
PALB2-202ENST00000561514 EIF5A2Q9GZV4 153 aaKnown RBP6.39□□□□□ -1.39
PALB2-202ENST00000561514 Q9N2K0 584 aa6.39□□□□□ -1.39
PALB2-202ENST00000561514 OR1A1Q9P1Q5 309 aa6.39□□□□□ -1.39
PALB2-202ENST00000561514 MRPS16Q9Y3D3 137 aaKnown RBP6.39□□□□□ -1.39
PALB2-202ENST00000561514 BORCS7-ASMTA0A0B4J1R7 106 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 H0Y980 276 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 CORTO00230 105 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 CSN3P07498 182 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 STAG3L2P0CL84 134 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 AADACP22760 399 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 LGALS7P47929 136 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 TMEM50BP56557 158 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 TAS2R20P59543 309 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 SLAQ13239 276 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 FXYD3Q14802 87 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 ACSM3Q53FZ2 586 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 CCDC71LQ8N9Z2 235 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 OR1L6Q8NGR2 347 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 ABHD5Q8WTS1 349 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 TMEM170AQ8WVE7 144 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 GFI1Q99684 422 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 HDHD3Q9BSH5 251 aaPredicted RBP6.38□□□□□ -1.39
PALB2-202ENST00000561514 CABLES2Q9BTV7 478 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 VAMP8Q9BV40 100 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 KCNK15Q9H427 330 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 PEF1Q9UBV8 284 aaKnown RBP6.38□□□□□ -1.39
PALB2-202ENST00000561514 AK3Q9UIJ7 227 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 TNCP24821 2201 aa6.38□□□□□ -1.39
PALB2-202ENST00000561514 C13orf42A0A1B0GVH6 325 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 IFITM5A6NNB3 132 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 SLC17A2O00624 439 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 SOCS1O15524 211 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 RBMXL2O75526 392 aaKnown RBP6.37□□□□□ -1.39
PALB2-202ENST00000561514 APOA2P02652 100 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 SCTP09683 121 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 ATP5IP56385 69 aaPredicted RBP6.37□□□□□ -1.39
PALB2-202ENST00000561514 LINC00205P59089 165 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 RPS16P62249 146 aaKnown RBP6.37□□□□□ -1.39
PALB2-202ENST00000561514 DHRS2Q13268 280 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 TMEM177Q53S58 311 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 PDZD11Q5EBL8 140 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 GFI1BQ5VTD9 330 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 LCN12Q6JVE5 192 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 SLC25A42Q86VD7 318 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 ADAD2Q8NCV1 583 aaKnown RBP6.37□□□□□ -1.39
PALB2-202ENST00000561514 GPR146Q96CH1 333 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 C5orf30Q96GV9 206 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 USMG5Q96IX5 58 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 SCGB3A2Q96PL1 93 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 PYGO2Q9BRQ0 406 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 SLC5A7Q9GZV3 580 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 PLEKHJ1Q9NW61 149 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 ZNF230Q9UIE0 474 aaPredicted RBP6.37□□□□□ -1.39
PALB2-202ENST00000561514 DNAH10Q8IVF4 4471 aa6.37□□□□□ -1.39
PALB2-202ENST00000561514 TRBV9A0A0B4J1U6 114 aa6.36□□□□□ -1.39
PALB2-202ENST00000561514 SRRM4A7MD48 611 aaKnown RBP6.36□□□□□ -1.39
PALB2-202ENST00000561514 H3BQ15 152 aa6.36□□□□□ -1.39
PALB2-202ENST00000561514 TRBV12-3P01733 135 aa6.36□□□□□ -1.39
PALB2-202ENST00000561514 HLA-AP01891 365 aaKnown RBP6.36□□□□□ -1.39
PALB2-202ENST00000561514 HBE1P02100 147 aa6.36□□□□□ -1.39
PALB2-202ENST00000561514 CXCL1P09341 107 aa6.36□□□□□ -1.39
PALB2-202ENST00000561514 OR13C7P0DN81 318 aa6.36□□□□□ -1.39
PALB2-202ENST00000561514 SYNJ2BPP57105 145 aa6.36□□□□□ -1.39
PALB2-202ENST00000561514 TMEM41BQ5BJD5 291 aa6.36□□□□□ -1.39
PALB2-202ENST00000561514 RNASE12Q5GAN4 147 aaKnown RBP6.36□□□□□ -1.39
PALB2-202ENST00000561514 ADAMTSL5Q6ZMM2 481 aa6.36□□□□□ -1.39
PALB2-202ENST00000561514 NIT1Q86X76 327 aa6.36□□□□□ -1.39
PALB2-202ENST00000561514 DDB2Q92466 427 aa6.36□□□□□ -1.39
PALB2-202ENST00000561514 MRGPRFQ96AM1 343 aa6.36□□□□□ -1.39
PALB2-202ENST00000561514 SCRT1Q9BWW7 348 aa6.36□□□□□ -1.39
PALB2-202ENST00000561514 KLK11Q9UBX7 282 aa6.36□□□□□ -1.39
PALB2-202ENST00000561514 NAT8Q9UHE5 227 aa6.36□□□□□ -1.39
PALB2-202ENST00000561514 C14orf166Q9Y224 244 aaKnown RBP6.36□□□□□ -1.39
PALB2-202ENST00000561514 LAMTOR2Q9Y2Q5 125 aa6.36□□□□□ -1.39
PALB2-202ENST00000561514 ZNF705FA8MVS1 300 aaPredicted RBP6.35□□□□□ -1.39
PALB2-202ENST00000561514 OR11H12B2RN74 326 aa6.35□□□□□ -1.39
PALB2-202ENST00000561514 C9JQL5 133 aa6.35□□□□□ -1.39
PALB2-202ENST00000561514 M0R1X1 148 aa6.35□□□□□ -1.39
PALB2-202ENST00000561514 BMPR1BO00238 502 aa6.35□□□□□ -1.39
PALB2-202ENST00000561514 RBFOX2O43251 390 aaKnown RBP eCLIP6.35□□□□□ -1.39
PALB2-202ENST00000561514 OR7C2O60412 319 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms