RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 RBMY1CP0DJD4 496 aa12.47□□□□□ -0.41
CDC42BPB-208ENST00000561271 HLA-DRB4P13762 266 aa12.47□□□□□ -0.41
CDC42BPB-208ENST00000561271 ID3Q02535 119 aa12.47□□□□□ -0.41
CDC42BPB-208ENST00000561271 RBMY1FQ15415 496 aaKnown RBP12.47□□□□□ -0.41
CDC42BPB-208ENST00000561271 OR8I2Q8N0Y5 310 aa12.47□□□□□ -0.41
CDC42BPB-208ENST00000561271 CSNK1G2-AS1Q8NCQ2 148 aa12.47□□□□□ -0.41
CDC42BPB-208ENST00000561271 LINC00052Q96N35 136 aa12.47□□□□□ -0.41
CDC42BPB-208ENST00000561271 PSENENQ9NZ42 101 aa12.47□□□□□ -0.41
CDC42BPB-208ENST00000561271 TBC1D24Q9ULP9 559 aa12.47□□□□□ -0.41
CDC42BPB-208ENST00000561271 HLA-DRB4X5D2U9 266 aa12.47□□□□□ -0.41
CDC42BPB-208ENST00000561271 SMCO3A2RU48 225 aa12.46□□□□□ -0.41
CDC42BPB-208ENST00000561271 CCNKO75909 580 aa12.46□□□□□ -0.41
CDC42BPB-208ENST00000561271 MIFP14174 115 aa12.46□□□□□ -0.41
CDC42BPB-208ENST00000561271 PSMB3P49720 205 aa12.46□□□□□ -0.41
CDC42BPB-208ENST00000561271 C1orf194Q5T5A4 169 aa12.46□□□□□ -0.41
CDC42BPB-208ENST00000561271 TMEM182Q6ZP80 229 aaPredicted RBP12.46□□□□□ -0.41
CDC42BPB-208ENST00000561271 C20orf85Q9H1P6 137 aa12.46□□□□□ -0.41
CDC42BPB-208ENST00000561271 SLC25A32Q9H2D1 315 aa12.46□□□□□ -0.41
CDC42BPB-208ENST00000561271 SLC25A22Q9H936 323 aa12.46□□□□□ -0.41
CDC42BPB-208ENST00000561271 XCL2Q9UBD3 114 aa12.46□□□□□ -0.41
CDC42BPB-208ENST00000561271 PLA2G10O15496 165 aa12.45□□□□□ -0.42
CDC42BPB-208ENST00000561271 IGKV3-20P01619 116 aa12.45□□□□□ -0.42
CDC42BPB-208ENST00000561271 IAH1Q2TAA2 248 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPB-208ENST00000561271 BPIFCQ8NFQ6 507 aa12.45□□□□□ -0.42
CDC42BPB-208ENST00000561271 KMT2AQ03164 3969 aa12.45□□□□□ -0.42
CDC42BPB-208ENST00000561271 ELOA3CA0A087WX78 387 aaPredicted RBP12.44□□□□□ -0.42
CDC42BPB-208ENST00000561271 PMS2P5A8MQ11 134 aa12.44□□□□□ -0.42
CDC42BPB-208ENST00000561271 LYRM1O43325 122 aa12.44□□□□□ -0.42
CDC42BPB-208ENST00000561271 CFDP00746 253 aaPredicted RBP12.44□□□□□ -0.42
CDC42BPB-208ENST00000561271 ORM2P19652 201 aa12.44□□□□□ -0.42
CDC42BPB-208ENST00000561271 ID1P41134 155 aa12.44□□□□□ -0.42
CDC42BPB-208ENST00000561271 FXYD7P58549 80 aa12.44□□□□□ -0.42
CDC42BPB-208ENST00000561271 OR1B1Q8NGR6 318 aa12.44□□□□□ -0.42
CDC42BPB-208ENST00000561271 C1QTNF4Q9BXJ3 329 aa12.44□□□□□ -0.42
CDC42BPB-208ENST00000561271 SAV1Q9H4B6 383 aaPredicted RBP12.44□□□□□ -0.42
CDC42BPB-208ENST00000561271 DOK5Q9P104 306 aa12.44□□□□□ -0.42
CDC42BPB-208ENST00000561271 RCL1Q9Y2P8 373 aaKnown RBP12.44□□□□□ -0.42
CDC42BPB-208ENST00000561271 BIRC6Q9NR09 4857 aa12.44□□□□□ -0.42
CDC42BPB-208ENST00000561271 ZNF98A6NK75 572 aa12.43□□□□□ -0.42
CDC42BPB-208ENST00000561271 CCSO14618 274 aa12.43□□□□□ -0.42
CDC42BPB-208ENST00000561271 METTL15P1P0C7V9 234 aa12.43□□□□□ -0.42
CDC42BPB-208ENST00000561271 PAX9P55771 341 aa12.43□□□□□ -0.42
CDC42BPB-208ENST00000561271 NUTF2P61970 127 aaKnown RBP12.43□□□□□ -0.42
CDC42BPB-208ENST00000561271 RRAS2P62070 204 aaPredicted RBP12.43□□□□□ -0.42
CDC42BPB-208ENST00000561271 FOXI2Q6ZQN5 318 aa12.43□□□□□ -0.42
CDC42BPB-208ENST00000561271 TMEM144Q7Z5S9 345 aa12.43□□□□□ -0.42
CDC42BPB-208ENST00000561271 ZBTB8BQ8NAP8 495 aaPredicted RBP12.43□□□□□ -0.42
CDC42BPB-208ENST00000561271 MITD1Q8WV92 249 aa12.43□□□□□ -0.42
CDC42BPB-208ENST00000561271 SMIM8Q96KF7 97 aa12.43□□□□□ -0.42
CDC42BPB-208ENST00000561271 TMEM147Q9BVK8 224 aa12.43□□□□□ -0.42
CDC42BPB-208ENST00000561271 SCRT1Q9BWW7 348 aa12.43□□□□□ -0.42
CDC42BPB-208ENST00000561271 HRH4Q9H3N8 390 aa12.43□□□□□ -0.42
CDC42BPB-208ENST00000561271 NDUFA13Q9P0J0 144 aa12.43□□□□□ -0.42
CDC42BPB-208ENST00000561271 SLC45A2Q9UMX9 530 aa12.43□□□□□ -0.42
CDC42BPB-208ENST00000561271 TRAV6A0A075B6T7 132 aa12.42□□□□□ -0.42
CDC42BPB-208ENST00000561271 F6UB75 175 aa12.42□□□□□ -0.42
CDC42BPB-208ENST00000561271 ISLRO14498 428 aa12.42□□□□□ -0.42
CDC42BPB-208ENST00000561271 HLA-DMBP28068 263 aa12.42□□□□□ -0.42
CDC42BPB-208ENST00000561271 GALR1P47211 349 aa12.42□□□□□ -0.42
CDC42BPB-208ENST00000561271 TMEM14EPQ6UXP3 125 aa12.42□□□□□ -0.42
CDC42BPB-208ENST00000561271 CYP2G1PQ6ZSU1 146 aa12.42□□□□□ -0.42
CDC42BPB-208ENST00000561271 C20orf173Q96LM9 149 aa12.42□□□□□ -0.42
CDC42BPB-208ENST00000561271 GSKIPQ9P0R6 139 aa12.42□□□□□ -0.42
CDC42BPB-208ENST00000561271 CELA1Q9UNI1 258 aa12.42□□□□□ -0.42
CDC42BPB-208ENST00000561271 IL5P05113 134 aa12.41□□□□□ -0.42
CDC42BPB-208ENST00000561271 DLK1P80370 383 aa12.41□□□□□ -0.42
CDC42BPB-208ENST00000561271 Q6ZTC4 211 aa12.41□□□□□ -0.42
CDC42BPB-208ENST00000561271 ZNF709Q8N972 641 aa12.41□□□□□ -0.42
CDC42BPB-208ENST00000561271 OR4B1Q8NGF8 309 aa12.41□□□□□ -0.42
CDC42BPB-208ENST00000561271 C2CD4CQ8TF44 421 aa12.41□□□□□ -0.42
CDC42BPB-208ENST00000561271 C16orf92Q96LL3 132 aa12.41□□□□□ -0.42
CDC42BPB-208ENST00000561271 C17orf77Q96MU5 243 aa12.41□□□□□ -0.42
CDC42BPB-208ENST00000561271 RSG1Q9BU20 258 aa12.41□□□□□ -0.42
CDC42BPB-208ENST00000561271 NUDT15Q9NV35 164 aa12.41□□□□□ -0.42
CDC42BPB-208ENST00000561271 VPS13DQ5THJ4 4388 aa12.41□□□□□ -0.42
CDC42BPB-208ENST00000561271 FRAS1Q86XX4 4008 aa12.4□□□□□ -0.42
CDC42BPB-208ENST00000561271 H3BRN7 92 aa12.4□□□□□ -0.42
CDC42BPB-208ENST00000561271 DEDDO75618 318 aa12.4□□□□□ -0.42
CDC42BPB-208ENST00000561271 TCRBP04435 133 aa12.4□□□□□ -0.42
CDC42BPB-208ENST00000561271 LINC00869P0C866 280 aa12.4□□□□□ -0.42
CDC42BPB-208ENST00000561271 MEOX2P50222 304 aa12.4□□□□□ -0.42
CDC42BPB-208ENST00000561271 CNPY1Q3B7I2 92 aa12.4□□□□□ -0.42
CDC42BPB-208ENST00000561271 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.4□□□□□ -0.42
CDC42BPB-208ENST00000561271 ZNF767PQ75MW2 155 aa12.4□□□□□ -0.42
CDC42BPB-208ENST00000561271 RPP25LQ8N5L8 163 aaKnown RBP12.4□□□□□ -0.42
CDC42BPB-208ENST00000561271 SEC22CQ9BRL7 303 aa12.4□□□□□ -0.42
CDC42BPB-208ENST00000561271 SLC35B3Q9H1N7 401 aa12.4□□□□□ -0.42
CDC42BPB-208ENST00000561271 IGHV3OR16-12A0A075B7B8 117 aa12.39□□□□□ -0.43
CDC42BPB-208ENST00000561271 TSC22D2O75157 780 aa12.39□□□□□ -0.43
CDC42BPB-208ENST00000561271 MBPP02686 304 aaPredicted RBP12.39□□□□□ -0.43
CDC42BPB-208ENST00000561271 SLC38A11Q08AI6 406 aa12.39□□□□□ -0.43
CDC42BPB-208ENST00000561271 SAMD13Q5VXD3 122 aa12.39□□□□□ -0.43
CDC42BPB-208ENST00000561271 ZNF705AQ6ZN79 300 aaPredicted RBP12.39□□□□□ -0.43
CDC42BPB-208ENST00000561271 UHRF2Q96PU4 802 aa12.39□□□□□ -0.43
CDC42BPB-208ENST00000561271 SLC25A39Q9BZJ4 359 aaPredicted RBP12.39□□□□□ -0.43
CDC42BPB-208ENST00000561271 RPRMQ9NS64 109 aa12.39□□□□□ -0.43
CDC42BPB-208ENST00000561271 MGAT4CQ9UBM8 478 aa12.39□□□□□ -0.43
CDC42BPB-208ENST00000561271 HIGD1AQ9Y241 93 aa12.39□□□□□ -0.43
CDC42BPB-208ENST00000561271 DNAH6Q9C0G6 4158 aa12.38□□□□□ -0.43
CDC42BPB-208ENST00000561271 A0A0J9YX75 114 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms