RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 DUSP14O95147 198 aaKnown RBP12.9□□□□□ -0.34
TPM1-226ENST00000560959 INSP01308 110 aa12.9□□□□□ -0.34
TPM1-226ENST00000560959 CD3DP04234 171 aa12.9□□□□□ -0.34
TPM1-226ENST00000560959 OR5AC1P0C628 307 aa12.9□□□□□ -0.34
TPM1-226ENST00000560959 GPX4P36969 197 aaPredicted RBP12.9□□□□□ -0.34
TPM1-226ENST00000560959 SELENOHQ8IZQ5 122 aaKnown RBP12.9□□□□□ -0.34
TPM1-226ENST00000560959 OR13C8Q8NGS7 320 aa12.9□□□□□ -0.34
TPM1-226ENST00000560959 LHFPL5Q8TAF8 219 aa12.9□□□□□ -0.34
TPM1-226ENST00000560959 C16orf92Q96LL3 132 aa12.9□□□□□ -0.34
TPM1-226ENST00000560959 C20orf173Q96LM9 149 aa12.9□□□□□ -0.34
TPM1-226ENST00000560959 UPK3BQ9BT76 320 aa12.9□□□□□ -0.34
TPM1-226ENST00000560959 IGKV1D-37A0A075B6S9 117 aa12.89□□□□□ -0.35
TPM1-226ENST00000560959 ZNF90Q03938 601 aa12.89□□□□□ -0.35
TPM1-226ENST00000560959 GPR141Q7Z602 305 aa12.89□□□□□ -0.35
TPM1-226ENST00000560959 OR11H7Q8NGC8 314 aa12.89□□□□□ -0.35
TPM1-226ENST00000560959 ZNF503Q96F45 646 aa12.89□□□□□ -0.35
TPM1-226ENST00000560959 KRTAP1-5Q9BYS1 174 aa12.89□□□□□ -0.35
TPM1-226ENST00000560959 PRM2P04554 102 aa12.88□□□□□ -0.35
TPM1-226ENST00000560959 ELK1P19419 428 aa12.88□□□□□ -0.35
TPM1-226ENST00000560959 GALR1P47211 349 aa12.88□□□□□ -0.35
TPM1-226ENST00000560959 GAMTQ14353 236 aa12.88□□□□□ -0.35
TPM1-226ENST00000560959 PGPEP1Q9NXJ5 209 aa12.88□□□□□ -0.35
TPM1-226ENST00000560959 MTFP1Q9UDX5 166 aa12.88□□□□□ -0.35
TPM1-226ENST00000560959 GABARAPH6UMI1 98 aa12.87□□□□□ -0.35
TPM1-226ENST00000560959 GABARAPO95166 117 aa12.87□□□□□ -0.35
TPM1-226ENST00000560959 CFDP00746 253 aaPredicted RBP12.87□□□□□ -0.35
TPM1-226ENST00000560959 AZU1P20160 251 aa12.87□□□□□ -0.35
TPM1-226ENST00000560959 CNN1P51911 297 aaKnown RBP12.87□□□□□ -0.35
TPM1-226ENST00000560959 LYZP61626 148 aa12.87□□□□□ -0.35
TPM1-226ENST00000560959 FCN2Q15485 313 aa12.87□□□□□ -0.35
TPM1-226ENST00000560959 SPINK13Q1W4C9 94 aa12.87□□□□□ -0.35
TPM1-226ENST00000560959 LYPD1Q8N2G4 141 aa12.87□□□□□ -0.35
TPM1-226ENST00000560959 TMEM256Q8N2U0 113 aa12.87□□□□□ -0.35
TPM1-226ENST00000560959 MARCH1Q8TCQ1 289 aa12.87□□□□□ -0.35
TPM1-226ENST00000560959 PPP1R14BQ96C90 147 aa12.87□□□□□ -0.35
TPM1-226ENST00000560959 NAA60Q9H7X0 242 aa12.87□□□□□ -0.35
TPM1-226ENST00000560959 SLC45A2Q9UMX9 530 aa12.87□□□□□ -0.35
TPM1-226ENST00000560959 TMEM56-RWDD3S4R434 201 aa12.87□□□□□ -0.35
TPM1-226ENST00000560959 TNFAIP8O95379 198 aa12.86□□□□□ -0.35
TPM1-226ENST00000560959 SULT1A3P0DMM9 295 aa12.86□□□□□ -0.35
TPM1-226ENST00000560959 SULT1A4P0DMN0 295 aa12.86□□□□□ -0.35
TPM1-226ENST00000560959 SURF2Q15527 256 aaPredicted RBP12.86□□□□□ -0.35
TPM1-226ENST00000560959 LGI3Q8N145 548 aa12.86□□□□□ -0.35
TPM1-226ENST00000560959 OR4D5Q8NGN0 318 aa12.86□□□□□ -0.35
TPM1-226ENST00000560959 YIPF6Q96EC8 236 aa12.86□□□□□ -0.35
TPM1-226ENST00000560959 C17orf77Q96MU5 243 aa12.86□□□□□ -0.35
TPM1-226ENST00000560959 TRGV9Q99603 122 aa12.86□□□□□ -0.35
TPM1-226ENST00000560959 RTBDNQ9BSG5 229 aaPredicted RBP12.86□□□□□ -0.35
TPM1-226ENST00000560959 C14orf166Q9Y224 244 aaKnown RBP12.86□□□□□ -0.35
TPM1-226ENST00000560959 TIMM8BQ9Y5J9 83 aaPredicted RBP12.86□□□□□ -0.35
TPM1-226ENST00000560959 FAT1Q14517 4588 aa12.86□□□□□ -0.35
TPM1-226ENST00000560959 VPS13BQ7Z7G8 4022 aa12.85□□□□□ -0.35
TPM1-226ENST00000560959 M0R2Z0 102 aa12.85□□□□□ -0.35
TPM1-226ENST00000560959 TAS2R60P59551 318 aa12.85□□□□□ -0.35
TPM1-226ENST00000560959 LSM3P62310 102 aaKnown RBP12.85□□□□□ -0.35
TPM1-226ENST00000560959 MEF2DQ14814 521 aa12.85□□□□□ -0.35
TPM1-226ENST00000560959 SCGB2B2Q4G0G5 96 aa12.85□□□□□ -0.35
TPM1-226ENST00000560959 TMEM268Q5VZI3 342 aa12.85□□□□□ -0.35
TPM1-226ENST00000560959 TMEM229BQ8NBD8 167 aa12.85□□□□□ -0.35
TPM1-226ENST00000560959 OR4D10Q8NGI6 311 aa12.85□□□□□ -0.35
TPM1-226ENST00000560959 OR52I2Q8NH67 350 aa12.85□□□□□ -0.35
TPM1-226ENST00000560959 DTD1Q8TEA8 209 aa12.85□□□□□ -0.35
TPM1-226ENST00000560959 IL22RA2Q969J5 263 aa12.85□□□□□ -0.35
TPM1-226ENST00000560959 C16orf74Q96GX8 76 aa12.85□□□□□ -0.35
TPM1-226ENST00000560959 SLC35E1Q96K37 410 aa12.85□□□□□ -0.35
TPM1-226ENST00000560959 RSG1Q9BU20 258 aa12.85□□□□□ -0.35
TPM1-226ENST00000560959 HSPB7Q9UBY9 170 aa12.85□□□□□ -0.35
TPM1-226ENST00000560959 TAS2R19P59542 299 aa12.84□□□□□ -0.35
TPM1-226ENST00000560959 ZNF493Q6ZR52 646 aa12.84□□□□□ -0.35
TPM1-226ENST00000560959 OR1B1Q8NGR6 318 aa12.84□□□□□ -0.35
TPM1-226ENST00000560959 OR10J6PQ8NGY7 276 aa12.84□□□□□ -0.35
TPM1-226ENST00000560959 RXFP4Q8TDU9 374 aa12.84□□□□□ -0.35
TPM1-226ENST00000560959 C15orf40Q8WUR7 153 aa12.84□□□□□ -0.35
TPM1-226ENST00000560959 GNPNAT1Q96EK6 184 aaPredicted RBP12.84□□□□□ -0.35
TPM1-226ENST00000560959 GPR82Q96P67 336 aa12.84□□□□□ -0.35
TPM1-226ENST00000560959 PTTG2Q9NZH5 202 aa12.84□□□□□ -0.35
TPM1-226ENST00000560959 CRYM-AS1A6NIL9 109 aa12.83□□□□□ -0.36
TPM1-226ENST00000560959 H3BNG1 76 aa12.83□□□□□ -0.36
TPM1-226ENST00000560959 HPGDSO60760 199 aa12.83□□□□□ -0.36
TPM1-226ENST00000560959 RAB3DO95716 219 aa12.83□□□□□ -0.36
TPM1-226ENST00000560959 GGNBP1Q5YKI7 109 aa12.83□□□□□ -0.36
TPM1-226ENST00000560959 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.83□□□□□ -0.36
TPM1-226ENST00000560959 LINC01587Q99440 93 aa12.83□□□□□ -0.36
TPM1-226ENST00000560959 SLC25A32Q9H2D1 315 aa12.83□□□□□ -0.36
TPM1-226ENST00000560959 ZNF98A6NK75 572 aa12.82□□□□□ -0.36
TPM1-226ENST00000560959 M6PRP20645 277 aa12.82□□□□□ -0.36
TPM1-226ENST00000560959 S100A7P31151 101 aa12.82□□□□□ -0.36
TPM1-226ENST00000560959 CCR6P51684 374 aa12.82□□□□□ -0.36
TPM1-226ENST00000560959 XGP55808 180 aa12.82□□□□□ -0.36
TPM1-226ENST00000560959 GPR107Q5VW38 600 aa12.82□□□□□ -0.36
TPM1-226ENST00000560959 CDPF1Q6NVV7 123 aa12.82□□□□□ -0.36
TPM1-226ENST00000560959 STEAP1BQ6NZ63 245 aa12.82□□□□□ -0.36
TPM1-226ENST00000560959 BAP18Q8IXM2 172 aa12.82□□□□□ -0.36
TPM1-226ENST00000560959 MRPS16Q9Y3D3 137 aaKnown RBP12.82□□□□□ -0.36
TPM1-226ENST00000560959 MYCBP2O75592 4640 aa12.82□□□□□ -0.36
TPM1-226ENST00000560959 BOLA2-SMG1P6H3BVE0 249 aa12.81□□□□□ -0.36
TPM1-226ENST00000560959 ZNF182P17025 639 aaPredicted RBP12.81□□□□□ -0.36
TPM1-226ENST00000560959 OR2F1Q13607 317 aa12.81□□□□□ -0.36
TPM1-226ENST00000560959 ESRGQ1W209 222 aa12.81□□□□□ -0.36
TPM1-226ENST00000560959 RNASE12Q5GAN4 147 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms