RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 ATP5L2Q7Z4Y8 100 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 SMIM29Q86T20 159 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 MOB3BQ86TA1 216 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 MOGAT3Q86VF5 341 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 ABHD12Q8N2K0 398 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 LINC00311Q8N616 119 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 SIGLECL1Q8N7X8 197 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 GATD1Q8NB37 220 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 ZNRF1Q8ND25 227 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 OR2Z1Q8NG97 314 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 OR8B3Q8NGG8 313 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 OR4A5Q8NH83 315 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 TMEM167AQ8TBQ9 72 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 VN1R17PQ8TDU5 208 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 ITLN1Q8WWA0 313 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 GLMPQ8WWB7 406 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 STARD4Q96DR4 205 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 GUCD1Q96NT3 240 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 OR2V2Q96R30 315 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 OR8B2Q96RD0 313 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 ATG101Q9BSB4 218 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 CHRDL1Q9BU40 450 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 MRPL20Q9BYC9 149 aaKnown RBP1.95□□□□□ -2.1
SPG11-223ENST00000560858 SAMD10Q9BYL1 202 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 RNASE7Q9H1E1 156 aaKnown RBP1.95□□□□□ -2.1
SPG11-223ENST00000560858 ZNF430Q9H8G1 570 aaPredicted RBP1.95□□□□□ -2.1
SPG11-223ENST00000560858 ENY2Q9NPA8 101 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 NRN1Q9NPD7 142 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 NDUFA4L2Q9NRX3 87 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 ZNF492Q9P255 531 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 UQCR10Q9UDW1 63 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 NAT8BQ9UHF3 227 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 ZFP30Q9Y2G7 519 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 MRPS16Q9Y3D3 137 aaKnown RBP1.95□□□□□ -2.1
SPG11-223ENST00000560858 PAM16Q9Y3D7 125 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 GOLT1BQ9Y3E0 138 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 OR51B2Q9Y5P1 312 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 SOX21Q9Y651 276 aaPredicted RBP1.95□□□□□ -2.1
SPG11-223ENST00000560858 LINC00312Q9Y6C7 94 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 ZDBF2Q9HCK1 2354 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 IGHV3OR15-7A0A075B7D8 119 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 TRBV6-1A0A0K0K1D8 114 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 TEX50A0A1B0GTY4 177 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 FAM231BA6NCW3 169 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 NKX6-3A6NJ46 265 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 C2orf70A6NJV1 201 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 SRRM4A7MD48 611 aaKnown RBP1.94□□□□□ -2.1
SPG11-223ENST00000560858 CRXO43186 299 aaPredicted RBP1.94□□□□□ -2.1
SPG11-223ENST00000560858 FCN3O75636 299 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 ACTL6BO94805 426 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 IGLV2-23P01705 113 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 IGHV1-46P01743 117 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 HLA-DRB1P01911 266 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 APOA2P02652 100 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 APCSP02743 223 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 IGKV1-16P04430 117 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 CRYGCP07315 174 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 SFTPCP11686 197 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 GP9P14770 177 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 PMCHP20382 165 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 TSPOP30536 169 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 CHRNB4P30926 498 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 REG1BP48304 166 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 GNG10P50151 68 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 FABP6P51161 128 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 HNRNPA3P51991 378 aaKnown RBP1.94□□□□□ -2.1
SPG11-223ENST00000560858 PRRX1P54821 245 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 DLX6P56179 175 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 TCL1AP56279 114 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 PLP1P60201 277 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 RPS20P60866 119 aaKnown RBP1.94□□□□□ -2.1
SPG11-223ENST00000560858 KRTDAPP60985 99 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 RPL8P62917 257 aaKnown RBP1.94□□□□□ -2.1
SPG11-223ENST00000560858 HBBP68871 147 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 WT1-ASQ06250 92 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 MEF2CQ06413 473 aaPredicted RBP1.94□□□□□ -2.1
SPG11-223ENST00000560858 FXYD3Q14802 87 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 LPAL2Q16609 132 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 FAM162BQ5T6X4 162 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 GDF5OSQ5U4N7 250 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 MRPL54Q6P161 138 aaKnown RBP1.94□□□□□ -2.1
SPG11-223ENST00000560858 DUX4L9Q6RFH8 374 aaPredicted RBP1.94□□□□□ -2.1
SPG11-223ENST00000560858 ZNF841Q6ZN19 808 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 Q86TA4 180 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 BAGE3Q86Y29 109 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 BAGE2Q86Y30 109 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 PDPNQ86YL7 162 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 KLHDC1Q8N7A1 406 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 FAM216BQ8N7L0 139 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 STPG4Q8N801 248 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 CNEP1R1Q8N9A8 125 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 C5orf17Q8NAS9 161 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 NHLRC2Q8NBF2 726 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 NUP37Q8NFH4 326 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 NUP35Q8NFH5 326 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 FDCSPQ8NFU4 85 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 OR4F17Q8NGA8 305 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 OR1L4Q8NGR5 311 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 OR10X1Q8NGY0 326 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 OR9G1Q8NH87 305 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms