RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 WFDC2Q14508 124 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 DEFB119Q8N690 84 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 URB1-AS1Q96HZ7 61 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 LYZL4Q96KX0 146 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 C2orf48Q96LS8 159 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 PRTFDC1Q9NRG1 225 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 CCL28Q9NRJ3 127 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 Q9UF83 564 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 LINC00312Q9Y6C7 94 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 SHANK1Q9Y566 2161 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 GTF3C1Q12789 2109 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 CPAMD8Q8IZJ3 1885 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 hADV38S2A0JD32 116 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 WNT9BO14905 357 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 SYNGR1O43759 233 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 KLF7O75840 302 aaPredicted RBP5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 CLDN14O95500 239 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 MGST1P10620 155 aaKnown RBP5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 ZNF718Q3SXZ3 478 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 LCNL1Q6ZST4 164 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 SLC25A48Q6ZT89 311 aaKnown RBP5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 LINC00173Q6ZV60 143 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 SYT8Q8NBV8 401 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 C19orf25Q9UFG5 118 aaPredicted RBP5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 VCANP13611 3396 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 IGHV1-24A0A0C4DH33 117 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 F5H5K5 113 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 DHRS3O75911 302 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 IGHV3-7P01780 117 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 FAM106CPP0CH98 169 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 SAA4P35542 130 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 GRB2P62993 217 aaKnown RBP5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 C16orf52Q8NHV5 167 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 LRRC29Q8WV35 223 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 CHCHD1Q96BP2 118 aaKnown RBP5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 OCIAD1Q9NX40 245 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 RALYQ9UKM9 306 aaKnown RBP5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 PCDH15Q96QU1 1955 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 COL5A1P20908 1838 aaPredicted RBP5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 IGHV5-51A0A0C4DH38 117 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 KIR2DS1A0A191URI9 304 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 F6UB75 175 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 PDCD6O75340 191 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 CXorf1O96002 111 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 OR5AL1P0C617 328 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 ARL14EPLP0DKL9 152 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 KIR2DS1Q14954 304 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 LINC01545Q5VT33 79 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 ACP7Q6ZNF0 438 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 ZNF645Q8N7E2 425 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 OR4X2Q8NGF9 303 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 TMEM54Q969K7 222 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 FAM218AQ96MZ4 157 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 C1QTNF4Q9BXJ3 329 aa5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 RNASE7Q9H1E1 156 aaKnown RBP5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 YTHDF2Q9Y5A9 579 aaKnown RBP5.37□□□□□ -1.55
TSPAN3-209ENST00000560715 ARHGAP21Q5T5U3 1957 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 PMS2P5A8MQ11 134 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 IGKV1-39P01597 117 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 ORM1P02763 201 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 MT-ATP8P03928 68 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 IGKV1D-39P04432 117 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 SMIM13P0DJ93 91 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 KLRD1Q13241 179 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 LAGE3Q14657 143 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 FXYD3Q14802 87 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 DEFB133Q30KQ1 61 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 PIGYQ3MUY2 71 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 ETDBQ3ZM63 59 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 ATP1A1-AS1Q5TC04 95 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 SH2D6Q7Z4S9 175 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 GTSF1Q8WW33 167 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 DDB2Q92466 427 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 TNRC6AQ8NDV7 1962 aaKnown RBP5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 TMED7-TICAM2A0A0A6YYA0 188 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 C5orf63A6NC05 138 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 C21orf140B9A014 251 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 IGKV1-5P01602 117 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 GP1BBP13224 206 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 GFERP55789 205 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 CENPWQ5EE01 88 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 GFRALQ6UXV0 394 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 SSX8Q7RTT4 187 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 Q8N7P7 452 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 ARPC1AQ92747 370 aa5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 SSBP3Q9BWW4 388 aaPredicted RBP5.36□□□□□ -1.55
TSPAN3-209ENST00000560715 RER1O15258 196 aa5.35□□□□□ -1.55
TSPAN3-209ENST00000560715 GUSBP1Q15486 140 aa5.35□□□□□ -1.55
TSPAN3-209ENST00000560715 GDF5OSQ5U4N7 250 aa5.35□□□□□ -1.55
TSPAN3-209ENST00000560715 Q6ZUT4 128 aa5.35□□□□□ -1.55
TSPAN3-209ENST00000560715 FAM19A1Q7Z5A9 133 aa5.35□□□□□ -1.55
TSPAN3-209ENST00000560715 OSR2Q8N2R0 312 aa5.35□□□□□ -1.55
TSPAN3-209ENST00000560715 OR51H1Q8NH63 302 aa5.35□□□□□ -1.55
TSPAN3-209ENST00000560715 C20orf78Q9BR46 151 aa5.35□□□□□ -1.55
TSPAN3-209ENST00000560715 ZNF442Q9H7R0 627 aa5.35□□□□□ -1.55
TSPAN3-209ENST00000560715 MED29Q9NX70 200 aa5.35□□□□□ -1.55
TSPAN3-209ENST00000560715 A0A1W2PRE2 83 aa5.35□□□□□ -1.55
TSPAN3-209ENST00000560715 CLPSP04118 112 aa5.35□□□□□ -1.55
TSPAN3-209ENST00000560715 SCTP09683 121 aa5.35□□□□□ -1.55
TSPAN3-209ENST00000560715 VDAC2P45880 294 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms