RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 DYNLRB2Q8TF09 96 aa10.63□□□□□ -0.71
PKNOX1-209ENST00000560448 SLC35E1Q96K37 410 aa10.63□□□□□ -0.71
PKNOX1-209ENST00000560448 TIMM9Q9Y5J7 89 aa10.63□□□□□ -0.71
PKNOX1-209ENST00000560448 UBE2L5PA0A1B0GUS4 154 aa10.62□□□□□ -0.71
PKNOX1-209ENST00000560448 SRSF3P84103 164 aaKnown RBP10.62□□□□□ -0.71
PKNOX1-209ENST00000560448 DPPA3Q6W0C5 159 aa10.62□□□□□ -0.71
PKNOX1-209ENST00000560448 RSG1Q9BU20 258 aa10.62□□□□□ -0.71
PKNOX1-209ENST00000560448 GGACTQ9BVM4 153 aa10.62□□□□□ -0.71
PKNOX1-209ENST00000560448 SCRT1Q9BWW7 348 aa10.62□□□□□ -0.71
PKNOX1-209ENST00000560448 UQCC1Q9NVA1 299 aa10.62□□□□□ -0.71
PKNOX1-209ENST00000560448 AURKAIP1Q9NWT8 199 aaPredicted RBP10.62□□□□□ -0.71
PKNOX1-209ENST00000560448 TRAV25A0A0B4J276 109 aa10.61□□□□□ -0.71
PKNOX1-209ENST00000560448 FNDC10F2Z333 226 aa10.61□□□□□ -0.71
PKNOX1-209ENST00000560448 IGLC1P0CG04 106 aa10.61□□□□□ -0.71
PKNOX1-209ENST00000560448 RND2P52198 227 aa10.61□□□□□ -0.71
PKNOX1-209ENST00000560448 KRTAP10-11P60412 298 aa10.61□□□□□ -0.71
PKNOX1-209ENST00000560448 DLK1P80370 383 aa10.61□□□□□ -0.71
PKNOX1-209ENST00000560448 SERF2P84101 59 aa10.61□□□□□ -0.71
PKNOX1-209ENST00000560448 UNQ9165/PRO28630Q6UXU0 137 aa10.61□□□□□ -0.71
PKNOX1-209ENST00000560448 FAM213BQ8TBF2 198 aa10.61□□□□□ -0.71
PKNOX1-209ENST00000560448 YIF1AO95070 293 aa10.6□□□□□ -0.71
PKNOX1-209ENST00000560448 IGHV3-48P01763 117 aa10.6□□□□□ -0.71
PKNOX1-209ENST00000560448 OR10J1P30954 320 aa10.6□□□□□ -0.71
PKNOX1-209ENST00000560448 AKR1C8PQ5T2L2 129 aa10.6□□□□□ -0.71
PKNOX1-209ENST00000560448 Q8WTZ3 238 aa10.6□□□□□ -0.71
PKNOX1-209ENST00000560448 WDR83OSQ9Y284 106 aa10.6□□□□□ -0.71
PKNOX1-209ENST00000560448 NOTCH1P46531 2555 aa10.6□□□□□ -0.71
PKNOX1-209ENST00000560448 TMEM218A2RU14 115 aa10.59□□□□□ -0.71
PKNOX1-209ENST00000560448 IGKV1-17P01599 117 aa10.59□□□□□ -0.71
PKNOX1-209ENST00000560448 GP9P14770 177 aa10.59□□□□□ -0.71
PKNOX1-209ENST00000560448 FGF7P21781 194 aa10.59□□□□□ -0.71
PKNOX1-209ENST00000560448 DEFB114Q30KQ6 69 aa10.59□□□□□ -0.71
PKNOX1-209ENST00000560448 NPIPB3Q92617 1050 aa10.59□□□□□ -0.71
PKNOX1-209ENST00000560448 NARS2Q96I59 477 aaKnown RBP10.59□□□□□ -0.71
PKNOX1-209ENST00000560448 C20orf24Q9BUV8 137 aa10.59□□□□□ -0.71
PKNOX1-209ENST00000560448 TMEM231Q9H6L2 316 aa10.59□□□□□ -0.71
PKNOX1-209ENST00000560448 VSIRQ9H7M9 311 aa10.59□□□□□ -0.71
PKNOX1-209ENST00000560448 RPRMQ9NS64 109 aa10.59□□□□□ -0.71
PKNOX1-209ENST00000560448 PUS1Q9Y606 427 aaKnown RBP eCLIP10.59□□□□□ -0.71
PKNOX1-209ENST00000560448 TRAV1-1A0A0B4J248 108 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 IGHV3-35A0A0C4DH35 117 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 A0A1W2PS18 150 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 TOMM40O96008 361 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 GAMTQ14353 236 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 MLANAQ16655 118 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 C10orf91Q5T1B1 145 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 TOMM20LQ6UXN7 152 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 CCDC28AQ8IWP9 274 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 ACY3Q96HD9 319 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 MRPL36Q9P0J6 103 aaKnown RBP10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 SORL1Q92673 2214 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 IGHV7-4-1A0A0J9YVY3 117 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 ZFP92A6NM28 416 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 AGPAT2O15120 278 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 H2AFB1P0C5Y9 115 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 S100A7P31151 101 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 CCL20P78556 96 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 AKR1C1Q04828 323 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 CD300EQ496F6 205 aaPredicted RBP10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 TM4SF20Q53R12 229 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 TMEM41BQ5BJD5 291 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 ADAMTSL5Q6ZMM2 481 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 GTSCR1Q86UQ5 136 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 MRAPQ8TCY5 172 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 MBD3L1Q8WWY6 194 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 METTL26Q96S19 204 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 TRGV9Q99603 122 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 NPCDR1Q9BY65 106 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 ZFAND3Q9H8U3 227 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 SMPXQ9UHP9 88 aa10.58□□□□□ -0.72
PKNOX1-209ENST00000560448 C9JQL5 133 aa10.57□□□□□ -0.72
PKNOX1-209ENST00000560448 RD3LP0DJH9 198 aa10.57□□□□□ -0.72
PKNOX1-209ENST00000560448 ADCYAP1P18509 176 aa10.57□□□□□ -0.72
PKNOX1-209ENST00000560448 NPPCP23582 126 aa10.57□□□□□ -0.72
PKNOX1-209ENST00000560448 ZNF726P1Q15940 193 aa10.57□□□□□ -0.72
PKNOX1-209ENST00000560448 RBPMS2Q6ZRY4 209 aaKnown RBP10.57□□□□□ -0.72
PKNOX1-209ENST00000560448 TMEM144Q7Z5S9 345 aa10.57□□□□□ -0.72
PKNOX1-209ENST00000560448 THAP8Q8NA92 274 aa10.57□□□□□ -0.72
PKNOX1-209ENST00000560448 OR51G1Q8NGK1 321 aa10.57□□□□□ -0.72
PKNOX1-209ENST00000560448 SPAG8Q99932 426 aaPredicted RBP10.57□□□□□ -0.72
PKNOX1-209ENST00000560448 LSM4Q9Y4Z0 139 aaKnown RBP10.57□□□□□ -0.72
PKNOX1-209ENST00000560448 MPDU1O75352 247 aa10.56□□□□□ -0.72
PKNOX1-209ENST00000560448 GUK1Q16774 197 aa10.56□□□□□ -0.72
PKNOX1-209ENST00000560448 TIGITQ495A1 244 aa10.56□□□□□ -0.72
PKNOX1-209ENST00000560448 GRAMD2BQ96HH9 432 aa10.56□□□□□ -0.72
PKNOX1-209ENST00000560448 ZNF414Q96IQ9 312 aa10.56□□□□□ -0.72
PKNOX1-209ENST00000560448 NPVFQ9HCQ7 196 aa10.56□□□□□ -0.72
PKNOX1-209ENST00000560448 TREM1Q9NP99 234 aa10.56□□□□□ -0.72
PKNOX1-209ENST00000560448 MLXQ9UH92 298 aa10.56□□□□□ -0.72
PKNOX1-209ENST00000560448 WI2-2373I1.2A0A1W2PRP0 233 aa10.55□□□□□ -0.72
PKNOX1-209ENST00000560448 K7EIL1 84 aa10.55□□□□□ -0.72
PKNOX1-209ENST00000560448 CHEK1O14757 476 aa10.55□□□□□ -0.72
PKNOX1-209ENST00000560448 TSPAN4O14817 238 aa10.55□□□□□ -0.72
PKNOX1-209ENST00000560448 HBE1P02100 147 aa10.55□□□□□ -0.72
PKNOX1-209ENST00000560448 CRYBB3P26998 211 aa10.55□□□□□ -0.72
PKNOX1-209ENST00000560448 RAB2AP61019 212 aa10.55□□□□□ -0.72
PKNOX1-209ENST00000560448 SSX7Q7RTT5 188 aa10.55□□□□□ -0.72
PKNOX1-209ENST00000560448 TMEM61Q8N0U2 210 aa10.55□□□□□ -0.72
PKNOX1-209ENST00000560448 RHPN1-AS1Q9BWJ2 59 aa10.55□□□□□ -0.72
PKNOX1-209ENST00000560448 CARHSP1Q9Y2V2 147 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms