RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 OR5I1Q13606 314 aa7.67□□□□□ -1.18
RTF1-206ENST00000560447 LY6DQ14210 128 aa7.67□□□□□ -1.18
RTF1-206ENST00000560447 OR10J3Q5JRS4 329 aa7.67□□□□□ -1.18
RTF1-206ENST00000560447 ZNF600Q6ZNG1 722 aa7.67□□□□□ -1.18
RTF1-206ENST00000560447 OR8I2Q8N0Y5 310 aa7.67□□□□□ -1.18
RTF1-206ENST00000560447 OR4F17Q8NGA8 305 aa7.67□□□□□ -1.18
RTF1-206ENST00000560447 OR4B1Q8NGF8 309 aa7.67□□□□□ -1.18
RTF1-206ENST00000560447 VN1R17PQ8TDU5 208 aa7.67□□□□□ -1.18
RTF1-206ENST00000560447 MLST8Q9BVC4 326 aa7.67□□□□□ -1.18
RTF1-206ENST00000560447 GFRA4Q9GZZ7 299 aa7.67□□□□□ -1.18
RTF1-206ENST00000560447 C7orf69Q9H7B7 122 aa7.67□□□□□ -1.18
RTF1-206ENST00000560447 UBTD1Q9HAC8 227 aa7.67□□□□□ -1.18
RTF1-206ENST00000560447 A0A1W2PPR1 153 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 SNURFLB1AK76 121 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 FAM229AH3BQW9 127 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 K7EQM0 130 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 NDUFS8O00217 210 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 GNG7O60262 68 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 LY6HO94772 140 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 TOX4O94842 621 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 IGHV3-48P01763 117 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 TMEM11P17152 192 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 DLX1P56177 255 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 TPPP2P59282 170 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 PKIAP61925 76 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 LMO4P61968 165 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 KLRD1Q13241 179 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 HES1Q14469 280 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 USF2Q15853 346 aaPredicted RBP7.66□□□□□ -1.18
RTF1-206ENST00000560447 IQCJQ1A5X6 159 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 CYB5R2Q6BCY4 276 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 TMEM136Q6ZRR5 245 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 LHFPL4Q7Z7J7 247 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 ZNF491Q8N8L2 437 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 TSKUQ8WUA8 353 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 RNF125Q96EQ8 232 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 FANCD2OSQ96PS1 177 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 RNASE7Q9H1E1 156 aaKnown RBP7.66□□□□□ -1.18
RTF1-206ENST00000560447 Q9H3A6 140 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 ZNF331Q9NQX6 463 aaPredicted RBP7.66□□□□□ -1.18
RTF1-206ENST00000560447 NAT8BQ9UHF3 227 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 PLXNB1O43157 2135 aa7.66□□□□□ -1.18
RTF1-206ENST00000560447 A8MWL6 223 aa7.65□□□□□ -1.18
RTF1-206ENST00000560447 TSTD3H0UI37 97 aa7.65□□□□□ -1.18
RTF1-206ENST00000560447 ZNF253O75346 499 aa7.65□□□□□ -1.18
RTF1-206ENST00000560447 SPTA1P02549 2419 aa7.65□□□□□ -1.18
RTF1-206ENST00000560447 IGLC2P0DOY2 106 aa7.65□□□□□ -1.18
RTF1-206ENST00000560447 CBLN1P23435 193 aa7.65□□□□□ -1.18
RTF1-206ENST00000560447 ZFP36P26651 326 aaKnown RBP7.65□□□□□ -1.18
RTF1-206ENST00000560447 CDKN1AP38936 164 aa7.65□□□□□ -1.18
RTF1-206ENST00000560447 IER3P46695 156 aa7.65□□□□□ -1.18
RTF1-206ENST00000560447 RAB9AP51151 201 aa7.65□□□□□ -1.18
RTF1-206ENST00000560447 PDZD11Q5EBL8 140 aa7.65□□□□□ -1.18
RTF1-206ENST00000560447 FAM162BQ5T6X4 162 aa7.65□□□□□ -1.18
RTF1-206ENST00000560447 RUSC1-AS1Q66K80 236 aa7.65□□□□□ -1.18
RTF1-206ENST00000560447 TMEM75Q8N9X5 138 aa7.65□□□□□ -1.18
RTF1-206ENST00000560447 NUDT10Q8NFP7 164 aa7.65□□□□□ -1.18
RTF1-206ENST00000560447 FAM110DQ8TAY7 271 aaPredicted RBP7.65□□□□□ -1.18
RTF1-206ENST00000560447 CMTM2Q8TAZ6 248 aa7.65□□□□□ -1.18
RTF1-206ENST00000560447 NUDT11Q96G61 164 aa7.65□□□□□ -1.18
RTF1-206ENST00000560447 PRSS22Q9GZN4 317 aa7.65□□□□□ -1.18
RTF1-206ENST00000560447 PRDM13Q9H4Q3 707 aa7.65□□□□□ -1.18
RTF1-206ENST00000560447 ZFP30Q9Y2G7 519 aa7.65□□□□□ -1.18
RTF1-206ENST00000560447 LAMA5O15230 3695 aa7.64□□□□□ -1.19
RTF1-206ENST00000560447 TRBV19A0A075B6N1 114 aa7.64□□□□□ -1.19
RTF1-206ENST00000560447 C19orf71A6NCJ1 209 aa7.64□□□□□ -1.19
RTF1-206ENST00000560447 NPIPB6E9PJ23 425 aa7.64□□□□□ -1.19
RTF1-206ENST00000560447 NDUFB8O95169 186 aa7.64□□□□□ -1.19
RTF1-206ENST00000560447 GZMBP10144 247 aa7.64□□□□□ -1.19
RTF1-206ENST00000560447 ASPHD1Q5U4P2 390 aa7.64□□□□□ -1.19
RTF1-206ENST00000560447 Q8N3U1 123 aa7.64□□□□□ -1.19
RTF1-206ENST00000560447 Q8N9W7 124 aa7.64□□□□□ -1.19
RTF1-206ENST00000560447 BLNKQ8WV28 456 aa7.64□□□□□ -1.19
RTF1-206ENST00000560447 NOL4LQ96MY1 436 aaPredicted RBP7.64□□□□□ -1.19
RTF1-206ENST00000560447 TBX15Q96SF7 602 aa7.64□□□□□ -1.19
RTF1-206ENST00000560447 RPP21Q9H633 154 aaKnown RBP7.64□□□□□ -1.19
RTF1-206ENST00000560447 SERTAD4Q9NUC0 356 aa7.64□□□□□ -1.19
RTF1-206ENST00000560447 ZNF586Q9NXT0 402 aa7.64□□□□□ -1.19
RTF1-206ENST00000560447 C21orf62Q9NYP8 219 aa7.64□□□□□ -1.19
RTF1-206ENST00000560447 IGF2RP11717 2491 aa7.64□□□□□ -1.19
RTF1-206ENST00000560447 ABCA4P78363 2273 aa7.63□□□□□ -1.19
RTF1-206ENST00000560447 IGHV7-81A0A0B4J1V7 117 aa7.63□□□□□ -1.19
RTF1-206ENST00000560447 A0A1W2PRD5 423 aa7.63□□□□□ -1.19
RTF1-206ENST00000560447 A0A1W2PRF3 423 aa7.63□□□□□ -1.19
RTF1-206ENST00000560447 A0A1W2PRM7 423 aa7.63□□□□□ -1.19
RTF1-206ENST00000560447 NCBP2LA6PVI3 153 aaKnown RBP7.63□□□□□ -1.19
RTF1-206ENST00000560447 LINC00587B1AMM8 73 aa7.63□□□□□ -1.19
RTF1-206ENST00000560447 MRPS12O15235 138 aaKnown RBP7.63□□□□□ -1.19
RTF1-206ENST00000560447 OR2J3O76001 311 aa7.63□□□□□ -1.19
RTF1-206ENST00000560447 APELAP0DMC3 54 aa7.63□□□□□ -1.19
RTF1-206ENST00000560447 PAX1P15863 534 aa7.63□□□□□ -1.19
RTF1-206ENST00000560447 RPL7P18124 248 aaKnown RBP7.63□□□□□ -1.19
RTF1-206ENST00000560447 GNLYP22749 145 aa7.63□□□□□ -1.19
RTF1-206ENST00000560447 CRIP2P52943 208 aaPredicted RBP7.63□□□□□ -1.19
RTF1-206ENST00000560447 PSG9Q00887 426 aa7.63□□□□□ -1.19
RTF1-206ENST00000560447 C19orf35Q6ZS72 473 aa7.63□□□□□ -1.19
RTF1-206ENST00000560447 Q86TA4 180 aa7.63□□□□□ -1.19
RTF1-206ENST00000560447 DAZAP1Q96EP5 407 aaKnown RBP7.63□□□□□ -1.19
RTF1-206ENST00000560447 IGHV3-21A0A0B4J1V1 117 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 A0A1B0GW15 77 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms