RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 IL4P05112 153 aa9.88□□□□□ -0.83
USP3-213ENST00000559711 GP9P14770 177 aa9.88□□□□□ -0.83
USP3-213ENST00000559711 ADMP35318 185 aa9.88□□□□□ -0.83
USP3-213ENST00000559711 SHANK2-AS3Q9BTD1 123 aa9.88□□□□□ -0.83
USP3-213ENST00000559711 CHRDL1Q9BU40 450 aa9.88□□□□□ -0.83
USP3-213ENST00000559711 TMEM14CQ9P0S9 112 aa9.88□□□□□ -0.83
USP3-213ENST00000559711 LINC00527Q9UJ94 153 aa9.88□□□□□ -0.83
USP3-213ENST00000559711 TEX15Q9BXT5 2789 aa9.88□□□□□ -0.83
USP3-213ENST00000559711 FAM223BA6NKX1 122 aa9.87□□□□□ -0.83
USP3-213ENST00000559711 GGTLC3B5MD39 225 aa9.87□□□□□ -0.83
USP3-213ENST00000559711 H3BRN7 92 aa9.87□□□□□ -0.83
USP3-213ENST00000559711 Q6ZS46 218 aa9.87□□□□□ -0.83
USP3-213ENST00000559711 S100A7AQ86SG5 101 aa9.87□□□□□ -0.83
USP3-213ENST00000559711 FAM223AQ8IWN6 122 aa9.87□□□□□ -0.83
USP3-213ENST00000559711 TEX29Q8N6K0 151 aa9.87□□□□□ -0.83
USP3-213ENST00000559711 EEF1AKMT3Q96AZ1 226 aa9.87□□□□□ -0.83
USP3-213ENST00000559711 MS4A10Q96PG2 267 aa9.87□□□□□ -0.83
USP3-213ENST00000559711 CLEC3BP05452 202 aa9.87□□□□□ -0.83
USP3-213ENST00000559711 NBEAP1P0C6P0 100 aa9.87□□□□□ -0.83
USP3-213ENST00000559711 RPL23P62829 140 aaKnown RBP9.87□□□□□ -0.83
USP3-213ENST00000559711 SUMO1P63165 101 aaKnown RBP9.87□□□□□ -0.83
USP3-213ENST00000559711 ATP5G2Q06055 141 aa9.87□□□□□ -0.83
USP3-213ENST00000559711 USF2Q15853 346 aaPredicted RBP9.87□□□□□ -0.83
USP3-213ENST00000559711 ZNF414Q96IQ9 312 aa9.87□□□□□ -0.83
USP3-213ENST00000559711 CCDC140Q96MF4 163 aa9.87□□□□□ -0.83
USP3-213ENST00000559711 DERL1Q9BUN8 251 aa9.87□□□□□ -0.83
USP3-213ENST00000559711 VPREB3Q9UKI3 123 aa9.87□□□□□ -0.83
USP3-213ENST00000559711 TSPAN4O14817 238 aa9.86□□□□□ -0.83
USP3-213ENST00000559711 GPR183P32249 361 aa9.86□□□□□ -0.83
USP3-213ENST00000559711 MYCNOSP40205 109 aa9.86□□□□□ -0.83
USP3-213ENST00000559711 CFHR3Q02985 330 aa9.86□□□□□ -0.83
USP3-213ENST00000559711 LEMD1Q68G75 181 aa9.86□□□□□ -0.83
USP3-213ENST00000559711 ZNF600Q6ZNG1 722 aa9.86□□□□□ -0.83
USP3-213ENST00000559711 NOL4LQ96MY1 436 aaPredicted RBP9.86□□□□□ -0.83
USP3-213ENST00000559711 ELOVL1Q9BW60 279 aa9.86□□□□□ -0.83
USP3-213ENST00000559711 TMEM242Q9NWH2 141 aa9.86□□□□□ -0.83
USP3-213ENST00000559711 MXRA5Q9NR99 2828 aa9.85□□□□□ -0.83
USP3-213ENST00000559711 CXorf65A6NEN9 183 aa9.85□□□□□ -0.83
USP3-213ENST00000559711 COLCA2A8K830 154 aa9.85□□□□□ -0.83
USP3-213ENST00000559711 SMAD7O15105 426 aaKnown RBP9.85□□□□□ -0.83
USP3-213ENST00000559711 IGLV1-40P01703 118 aa9.85□□□□□ -0.83
USP3-213ENST00000559711 TRGV3P03979 118 aa9.85□□□□□ -0.83
USP3-213ENST00000559711 HIST1H1EP10412 219 aaKnown RBP9.85□□□□□ -0.83
USP3-213ENST00000559711 C15orf54Q8N8G6 183 aa9.85□□□□□ -0.83
USP3-213ENST00000559711 C2CD4CQ8TF44 421 aa9.85□□□□□ -0.83
USP3-213ENST00000559711 USMG5Q96IX5 58 aa9.85□□□□□ -0.83
USP3-213ENST00000559711 TCEAL7Q9BRU2 100 aa9.85□□□□□ -0.83
USP3-213ENST00000559711 TMA7Q9Y2S6 64 aaKnown RBP9.85□□□□□ -0.83
USP3-213ENST00000559711 TRBV20OR9-2A0A075B6H5 130 aa9.84□□□□□ -0.83
USP3-213ENST00000559711 ZNF98A6NK75 572 aa9.84□□□□□ -0.83
USP3-213ENST00000559711 TGOLN2O43493 480 aa9.84□□□□□ -0.83
USP3-213ENST00000559711 CRYBB3P26998 211 aa9.84□□□□□ -0.83
USP3-213ENST00000559711 ADIRFQ15847 76 aa9.84□□□□□ -0.83
USP3-213ENST00000559711 CLEC19AQ6UXS0 136 aa9.84□□□□□ -0.83
USP3-213ENST00000559711 LINC01551Q86U37 167 aa9.84□□□□□ -0.83
USP3-213ENST00000559711 ZNF329Q86UD4 541 aa9.84□□□□□ -0.83
USP3-213ENST00000559711 BPIFA4PQ86YQ2 179 aa9.84□□□□□ -0.83
USP3-213ENST00000559711 CTDSP1Q9GZU7 261 aa9.84□□□□□ -0.83
USP3-213ENST00000559711 RNF24Q9Y225 148 aa9.84□□□□□ -0.83
USP3-213ENST00000559711 PRELID1Q9Y255 219 aa9.84□□□□□ -0.83
USP3-213ENST00000559711 C9JCJ5 164 aa9.83□□□□□ -0.84
USP3-213ENST00000559711 MRPS12O15235 138 aaKnown RBP9.83□□□□□ -0.84
USP3-213ENST00000559711 KRTAP1-1Q07627 177 aa9.83□□□□□ -0.84
USP3-213ENST00000559711 TOMM20LQ6UXN7 152 aa9.83□□□□□ -0.84
USP3-213ENST00000559711 YPEL4Q96NS1 127 aa9.83□□□□□ -0.84
USP3-213ENST00000559711 LY96Q9Y6Y9 160 aa9.83□□□□□ -0.84
USP3-213ENST00000559711 ZFHX3Q15911 3703 aa9.83□□□□□ -0.84
USP3-213ENST00000559711 HECTD1Q9ULT8 2610 aa9.83□□□□□ -0.84
USP3-213ENST00000559711 HELTA6NFD8 242 aa9.83□□□□□ -0.84
USP3-213ENST00000559711 BMPR1BO00238 502 aa9.83□□□□□ -0.84
USP3-213ENST00000559711 HOXA3O43365 443 aaPredicted RBP9.83□□□□□ -0.84
USP3-213ENST00000559711 MT-ND4LP03901 98 aa9.83□□□□□ -0.84
USP3-213ENST00000559711 S100A7P31151 101 aa9.83□□□□□ -0.84
USP3-213ENST00000559711 RPL35P42766 123 aaKnown RBP9.83□□□□□ -0.84
USP3-213ENST00000559711 TPPP2P59282 170 aa9.83□□□□□ -0.84
USP3-213ENST00000559711 RANP62826 216 aaKnown RBP9.83□□□□□ -0.84
USP3-213ENST00000559711 RNF212Q495C1 297 aa9.83□□□□□ -0.84
USP3-213ENST00000559711 BLNKQ8WV28 456 aa9.83□□□□□ -0.84
USP3-213ENST00000559711 TMEM190Q8WZ59 177 aa9.83□□□□□ -0.84
USP3-213ENST00000559711 ISOC2Q96AB3 205 aa9.83□□□□□ -0.84
USP3-213ENST00000559711 ZFAND3Q9H8U3 227 aa9.83□□□□□ -0.84
USP3-213ENST00000559711 ZNF586Q9NXT0 402 aa9.83□□□□□ -0.84
USP3-213ENST00000559711 CD5LO43866 347 aa9.82□□□□□ -0.84
USP3-213ENST00000559711 IGLC2P0DOY2 106 aa9.82□□□□□ -0.84
USP3-213ENST00000559711 RELQ04864 619 aaPredicted RBP9.82□□□□□ -0.84
USP3-213ENST00000559711 HIST1H2BAQ96A08 127 aa9.82□□□□□ -0.84
USP3-213ENST00000559711 KLK15Q9H2R5 256 aa9.82□□□□□ -0.84
USP3-213ENST00000559711 RABAC1Q9UI14 185 aa9.82□□□□□ -0.84
USP3-213ENST00000559711 FASNP49327 2511 aaKnown RBP9.82□□□□□ -0.84
USP3-213ENST00000559711 FLNAP21333 2647 aaKnown RBP9.81□□□□□ -0.84
USP3-213ENST00000559711 TRBV19A0A075B6N1 114 aa9.81□□□□□ -0.84
USP3-213ENST00000559711 TMEM89A2RUT3 159 aa9.81□□□□□ -0.84
USP3-213ENST00000559711 PGPA6NDG6 321 aa9.81□□□□□ -0.84
USP3-213ENST00000559711 CLDN34H7C241 214 aa9.81□□□□□ -0.84
USP3-213ENST00000559711 IGHG4P01861 327 aa9.81□□□□□ -0.84
USP3-213ENST00000559711 SNRPCP09234 159 aaKnown RBP9.81□□□□□ -0.84
USP3-213ENST00000559711 TMEM86BQ8N661 226 aa9.81□□□□□ -0.84
USP3-213ENST00000559711 OR4F17Q8NGA8 305 aa9.81□□□□□ -0.84
USP3-213ENST00000559711 OCC1Q8TAD7 63 aa9.81□□□□□ -0.84
USP3-213ENST00000559711 PRSS22Q9GZN4 317 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms