RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 ATP5IP56385 69 aaPredicted RBP8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 ACTL10Q5JWF8 245 aa8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 CLEC19AQ6UXS0 136 aa8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 C11orf53Q8IXP5 236 aa8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 NABP2Q9BQ15 211 aa8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 LOC389332A0A1B0GUA5 103 aa8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 WIPF3A6NGB9 483 aa8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 GUSBP1Q15486 140 aa8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 MSMPQ1L6U9 139 aa8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 GCSAMLQ5JQS6 135 aa8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 LINC01551Q86U37 167 aa8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 RNASEH2CQ8TDP1 164 aaKnown RBP8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 SMIM12Q96EX1 92 aa8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 IFI27L2Q9H2X8 130 aa8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 PEF1Q9UBV8 284 aaKnown RBP8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 PRRC2AP48634 2157 aaKnown RBP8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 IGHV4-61A0A0C4DH41 118 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 IGKV1-6A0A0C4DH72 117 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 NPSP0C0P6 89 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 OR9G9P0C7N8 305 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 C8orf88P0DMB2 117 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 PGLYRP4Q96LB8 373 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 MOB4Q9Y3A3 225 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 WNK1Q9H4A3 2382 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 IGHV4-30-2A0A087WSY4 118 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 IGHV2-70DA0A0C4DH43 119 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 LINC00473A8K010 186 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 SNAI2O43623 268 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 IL6RP08887 468 aaPredicted RBP8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 FABP2P12104 132 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 C5orf17Q8NAS9 161 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 OR10W1Q8NGF6 305 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 RNASE7Q9H1E1 156 aaKnown RBP8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 ABCA12Q86UK0 2595 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 TRAV9-1A0A075B6T8 112 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 C15orf61A6NNL5 157 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 ZNF324O75467 553 aaPredicted RBP8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 MMP23AO75900 390 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 PFN1P07737 140 aaKnown RBP8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 UBE2E1P51965 193 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 FGF23Q9GZV9 251 aaPredicted RBP8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 BEX4Q9NWD9 120 aaPredicted RBP8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 POLR3KQ9Y2Y1 108 aaPredicted RBP8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 DSCAMO60469 2012 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 TMSB15BA0A087X1C1 80 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 PGPA6NDG6 321 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 C22orf46C9J442 243 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 H3BTX0 84 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 RELQ04864 619 aaPredicted RBP8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 C16orf92Q96LL3 132 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 DERL1Q9BUN8 251 aa8.66□□□□□ -1.02
CARMIL3-202ENST00000559694 A0A1B0GUS0 222 aa8.65□□□□□ -1.02
CARMIL3-202ENST00000559694 CGB1A6NKQ9 187 aa8.65□□□□□ -1.02
CARMIL3-202ENST00000559694 ID1P41134 155 aa8.65□□□□□ -1.02
CARMIL3-202ENST00000559694 RHOGP84095 191 aa8.65□□□□□ -1.02
CARMIL3-202ENST00000559694 FOXL1Q12952 345 aa8.65□□□□□ -1.02
CARMIL3-202ENST00000559694 LIME1Q9H400 295 aa8.65□□□□□ -1.02
CARMIL3-202ENST00000559694 CTSZQ9UBR2 303 aa8.65□□□□□ -1.02
CARMIL3-202ENST00000559694 CDC42EP3Q9UKI2 254 aa8.65□□□□□ -1.02
CARMIL3-202ENST00000559694 IL15RAQ13261 267 aa8.65□□□□□ -1.02
CARMIL3-202ENST00000559694 ZNF329Q86UD4 541 aa8.65□□□□□ -1.02
CARMIL3-202ENST00000559694 IGHV1-69DA0A0B4J2H0 117 aa8.65□□□□□ -1.03
CARMIL3-202ENST00000559694 IGHV3-66A0A0C4DH42 116 aa8.65□□□□□ -1.03
CARMIL3-202ENST00000559694 H0YJW9 148 aa8.65□□□□□ -1.03
CARMIL3-202ENST00000559694 IGHV1-69P01742 117 aa8.65□□□□□ -1.03
CARMIL3-202ENST00000559694 SCGB1C2P0DMR2 95 aa8.65□□□□□ -1.03
CARMIL3-202ENST00000559694 PRSS8Q16651 343 aa8.65□□□□□ -1.03
CARMIL3-202ENST00000559694 IL17RELQ6ZVW7 336 aa8.65□□□□□ -1.03
CARMIL3-202ENST00000559694 KAAG1Q9UBP8 84 aa8.65□□□□□ -1.03
CARMIL3-202ENST00000559694 COL5A1P20908 1838 aaPredicted RBP8.65□□□□□ -1.03
CARMIL3-202ENST00000559694 IGKV1-16P04430 117 aa8.64□□□□□ -1.03
CARMIL3-202ENST00000559694 C5orf64Q2M2E5 130 aa8.64□□□□□ -1.03
CARMIL3-202ENST00000559694 UNC80Q8N2C7 3258 aa8.64□□□□□ -1.03
CARMIL3-202ENST00000559694 CX3CL1P78423 397 aa8.64□□□□□ -1.03
CARMIL3-202ENST00000559694 TMEM177Q53S58 311 aa8.64□□□□□ -1.03
CARMIL3-202ENST00000559694 KLF17Q5JT82 389 aaPredicted RBP8.64□□□□□ -1.03
CARMIL3-202ENST00000559694 HIST2H2BCQ6DN03 193 aa8.64□□□□□ -1.03
CARMIL3-202ENST00000559694 PRNTQ86SH4 94 aa8.64□□□□□ -1.03
CARMIL3-202ENST00000559694 C8orf46Q8TAG6 207 aa8.64□□□□□ -1.03
CARMIL3-202ENST00000559694 TRAV9-2A0A087WT02 112 aa8.64□□□□□ -1.03
CARMIL3-202ENST00000559694 GCSHP23434 173 aa8.64□□□□□ -1.03
CARMIL3-202ENST00000559694 TM4SF20Q53R12 229 aa8.64□□□□□ -1.03
CARMIL3-202ENST00000559694 Q6ZS49 121 aa8.64□□□□□ -1.03
CARMIL3-202ENST00000559694 LYPD6BQ8NI32 183 aa8.64□□□□□ -1.03
CARMIL3-202ENST00000559694 NEU1Q99519 415 aa8.64□□□□□ -1.03
CARMIL3-202ENST00000559694 TRAV3A0A0B4J244 114 aa8.63□□□□□ -1.03
CARMIL3-202ENST00000559694 TMEM50AO95807 157 aa8.63□□□□□ -1.03
CARMIL3-202ENST00000559694 GATA2P23769 480 aaPredicted RBP8.63□□□□□ -1.03
CARMIL3-202ENST00000559694 C17orf58Q2M2W7 97 aa8.63□□□□□ -1.03
CARMIL3-202ENST00000559694 AGMATQ9BSE5 352 aa8.63□□□□□ -1.03
CARMIL3-202ENST00000559694 TRAV41A0A0B4J266 112 aa8.63□□□□□ -1.03
CARMIL3-202ENST00000559694 OR2T8A6NH00 312 aa8.63□□□□□ -1.03
CARMIL3-202ENST00000559694 DLX6P56179 175 aa8.63□□□□□ -1.03
CARMIL3-202ENST00000559694 ANAPC10Q9UM13 185 aa8.63□□□□□ -1.03
CARMIL3-202ENST00000559694 A0A0G2JRQ6 117 aa8.63□□□□□ -1.03
CARMIL3-202ENST00000559694 IGFBP2P18065 325 aa8.63□□□□□ -1.03
CARMIL3-202ENST00000559694 RPL7P18124 248 aaKnown RBP8.63□□□□□ -1.03
CARMIL3-202ENST00000559694 KRTAP27-1Q3LI81 207 aa8.63□□□□□ -1.03
CARMIL3-202ENST00000559694 JKAMPQ9P055 326 aa8.63□□□□□ -1.03
CARMIL3-202ENST00000559694 SETD2Q9BYW2 2564 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms