RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 JMJD8Q96S16 334 aa13.33□□□□□ -0.28
CHRNA3-206ENST00000559658 PFDN5Q99471 154 aa13.33□□□□□ -0.28
CHRNA3-206ENST00000559658 C16orf95Q9H693 158 aa13.33□□□□□ -0.28
CHRNA3-206ENST00000559658 MRPL27Q9P0M9 148 aaKnown RBP13.33□□□□□ -0.28
CHRNA3-206ENST00000559658 A0A0G2JLM5 398 aa13.32□□□□□ -0.28
CHRNA3-206ENST00000559658 ZNF207O43670 478 aaKnown RBP13.32□□□□□ -0.28
CHRNA3-206ENST00000559658 HSPB1P04792 205 aaKnown RBP13.32□□□□□ -0.28
CHRNA3-206ENST00000559658 OR10J4P0C629 311 aa13.32□□□□□ -0.28
CHRNA3-206ENST00000559658 PYYP10082 97 aa13.32□□□□□ -0.28
CHRNA3-206ENST00000559658 DEFB136Q30KP8 78 aa13.32□□□□□ -0.28
CHRNA3-206ENST00000559658 ZNF600Q6ZNG1 722 aa13.32□□□□□ -0.28
CHRNA3-206ENST00000559658 Q8WTZ3 238 aa13.32□□□□□ -0.28
CHRNA3-206ENST00000559658 SLC25A39Q9BZJ4 359 aaPredicted RBP13.32□□□□□ -0.28
CHRNA3-206ENST00000559658 GNG13Q9P2W3 67 aa13.32□□□□□ -0.28
CHRNA3-206ENST00000559658 HIGD1AQ9Y241 93 aa13.32□□□□□ -0.28
CHRNA3-206ENST00000559658 CLPSL1A2RUU4 121 aa13.31□□□□□ -0.28
CHRNA3-206ENST00000559658 HAX1O00165 279 aa13.31□□□□□ -0.28
CHRNA3-206ENST00000559658 IL34Q6ZMJ4 242 aa13.31□□□□□ -0.28
CHRNA3-206ENST00000559658 TENM1Q9UKZ4 2725 aa13.31□□□□□ -0.28
CHRNA3-206ENST00000559658 FABP1P07148 127 aa13.31□□□□□ -0.28
CHRNA3-206ENST00000559658 CD28P10747 220 aa13.31□□□□□ -0.28
CHRNA3-206ENST00000559658 KHDC1LQ5JSQ8 128 aa13.31□□□□□ -0.28
CHRNA3-206ENST00000559658 FAM210AQ96ND0 272 aa13.31□□□□□ -0.28
CHRNA3-206ENST00000559658 ELOA3CA0A087WX78 387 aaPredicted RBP13.3□□□□□ -0.28
CHRNA3-206ENST00000559658 IGHV3-49A0A0A0MS15 119 aa13.3□□□□□ -0.28
CHRNA3-206ENST00000559658 OR7C2O60412 319 aa13.3□□□□□ -0.28
CHRNA3-206ENST00000559658 HBE1P02100 147 aa13.3□□□□□ -0.28
CHRNA3-206ENST00000559658 EDN2P20800 178 aa13.3□□□□□ -0.28
CHRNA3-206ENST00000559658 DUX3Q96PT4 197 aa13.3□□□□□ -0.28
CHRNA3-206ENST00000559658 MRPL32Q9BYC8 188 aaKnown RBP13.3□□□□□ -0.28
CHRNA3-206ENST00000559658 IGHV4OR15-8A0A075B7B6 117 aa13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 IGHV3OR16-13A0A075B7E8 117 aa13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 A0A087WW49 117 aa13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 IGHV3-74A0A0B4J1X5 117 aa13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 H3BRN7 92 aa13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 NDUFA7O95182 113 aa13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 APOHP02749 345 aaPredicted RBP13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 LGALS1P09382 135 aaKnown RBP13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 C8orf88P0DMB2 117 aa13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 GCHFRP30047 84 aa13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 UBE2G2P60604 165 aa13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 GUK1Q16774 197 aa13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 UBE2E2Q96LR5 201 aa13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 GAR1Q9NY12 217 aaKnown RBP13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 TECRQ9NZ01 308 aaKnown RBP13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 PEF1Q9UBV8 284 aaKnown RBP13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 IGHV3-66A0A0C4DH42 116 aa13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 H3BTX0 84 aa13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 ATP6V0BQ99437 205 aa13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 SHANK2-AS3Q9BTD1 123 aa13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 C20orf24Q9BUV8 137 aa13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 C19orf24Q9BVV8 132 aa13.29□□□□□ -0.28
CHRNA3-206ENST00000559658 I3L521 148 aa13.28□□□□□ -0.28
CHRNA3-206ENST00000559658 CXorf1O96002 111 aa13.28□□□□□ -0.28
CHRNA3-206ENST00000559658 GP9P14770 177 aa13.28□□□□□ -0.28
CHRNA3-206ENST00000559658 PROK1P58294 105 aa13.28□□□□□ -0.28
CHRNA3-206ENST00000559658 KRTAP10-3P60369 221 aa13.28□□□□□ -0.28
CHRNA3-206ENST00000559658 ICAM4Q14773 271 aa13.28□□□□□ -0.28
CHRNA3-206ENST00000559658 RNF114Q9Y508 228 aa13.28□□□□□ -0.28
CHRNA3-206ENST00000559658 LOC102723971A0A1B0GUV8 181 aa13.27□□□□□ -0.28
CHRNA3-206ENST00000559658 A0A1W2PRX2 142 aa13.27□□□□□ -0.28
CHRNA3-206ENST00000559658 RAB19A4D1S5 217 aa13.27□□□□□ -0.28
CHRNA3-206ENST00000559658 RBFOX3A6NFN3 312 aa13.27□□□□□ -0.28
CHRNA3-206ENST00000559658 SCGB2A1O75556 95 aa13.27□□□□□ -0.28
CHRNA3-206ENST00000559658 RELQ04864 619 aaPredicted RBP13.27□□□□□ -0.28
CHRNA3-206ENST00000559658 KHDC3LQ587J8 217 aa13.27□□□□□ -0.28
CHRNA3-206ENST00000559658 EIF5A2Q9GZV4 153 aaKnown RBP13.27□□□□□ -0.28
CHRNA3-206ENST00000559658 YTHDF2Q9Y5A9 579 aaKnown RBP13.27□□□□□ -0.28
CHRNA3-206ENST00000559658 SELENOKQ9Y6D0 94 aa13.27□□□□□ -0.28
CHRNA3-206ENST00000559658 PAGE4O60829 102 aa13.27□□□□□ -0.29
CHRNA3-206ENST00000559658 CD5P06127 495 aa13.27□□□□□ -0.29
CHRNA3-206ENST00000559658 BCL2P10415 239 aa13.27□□□□□ -0.29
CHRNA3-206ENST00000559658 UBE2L3P68036 154 aaKnown RBP13.27□□□□□ -0.29
CHRNA3-206ENST00000559658 EIF4E3Q8N5X7 224 aaKnown RBP13.27□□□□□ -0.29
CHRNA3-206ENST00000559658 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.27□□□□□ -0.29
CHRNA3-206ENST00000559658 RXFP4Q8TDU9 374 aa13.27□□□□□ -0.29
CHRNA3-206ENST00000559658 FXYD5Q96DB9 178 aa13.27□□□□□ -0.29
CHRNA3-206ENST00000559658 RNF2Q99496 336 aa13.27□□□□□ -0.29
CHRNA3-206ENST00000559658 CITED2Q99967 270 aaPredicted RBP13.27□□□□□ -0.29
CHRNA3-206ENST00000559658 ZNF98A6NK75 572 aa13.26□□□□□ -0.29
CHRNA3-206ENST00000559658 GGCTO75223 188 aaKnown RBP13.26□□□□□ -0.29
CHRNA3-206ENST00000559658 ATP5G3P48201 142 aa13.26□□□□□ -0.29
CHRNA3-206ENST00000559658 COMMD1Q8N668 190 aa13.26□□□□□ -0.29
CHRNA3-206ENST00000559658 KLHL30-AS1Q8NEE0 82 aa13.26□□□□□ -0.29
CHRNA3-206ENST00000559658 LINC00052Q96N35 136 aa13.26□□□□□ -0.29
CHRNA3-206ENST00000559658 RABAC1Q9UI14 185 aa13.26□□□□□ -0.29
CHRNA3-206ENST00000559658 ADCYAP1P18509 176 aa13.25□□□□□ -0.29
CHRNA3-206ENST00000559658 TAS2R45P59539 299 aa13.25□□□□□ -0.29
CHRNA3-206ENST00000559658 C8orf86Q6ZUL3 223 aa13.25□□□□□ -0.29
CHRNA3-206ENST00000559658 OR4F5Q8NH21 305 aa13.25□□□□□ -0.29
CHRNA3-206ENST00000559658 TMEM190Q8WZ59 177 aa13.25□□□□□ -0.29
CHRNA3-206ENST00000559658 PAXXQ9BUH6 204 aa13.25□□□□□ -0.29
CHRNA3-206ENST00000559658 TREM1Q9NP99 234 aa13.25□□□□□ -0.29
CHRNA3-206ENST00000559658 ZNF320A2RRD8 509 aa13.25□□□□□ -0.29
CHRNA3-206ENST00000559658 NDUFA4O00483 81 aa13.25□□□□□ -0.29
CHRNA3-206ENST00000559658 CDX1P47902 265 aaPredicted RBP13.25□□□□□ -0.29
CHRNA3-206ENST00000559658 ZNF506Q5JVG8 444 aa13.25□□□□□ -0.29
CHRNA3-206ENST00000559658 FAM209BQ5JX69 171 aa13.25□□□□□ -0.29
CHRNA3-206ENST00000559658 PQLC2Q6ZP29 291 aa13.25□□□□□ -0.29
CHRNA3-206ENST00000559658 NARS2Q96I59 477 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms