RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 TCF24Q7RTU0 167 aa8.15□□□□□ -1.1
TPM1-217ENST00000559108 TMEM37Q8WXS4 190 aa8.15□□□□□ -1.1
TPM1-217ENST00000559108 METTL26Q96S19 204 aa8.15□□□□□ -1.1
TPM1-217ENST00000559108 ATP5SQ99766 215 aa8.15□□□□□ -1.1
TPM1-217ENST00000559108 GINS3Q9BRX5 216 aa8.15□□□□□ -1.1
TPM1-217ENST00000559108 NPCDR1Q9BY65 106 aa8.15□□□□□ -1.1
TPM1-217ENST00000559108 WDR61Q9GZS3 305 aaKnown RBP8.15□□□□□ -1.1
TPM1-217ENST00000559108 TECRQ9NZ01 308 aaKnown RBP8.15□□□□□ -1.1
TPM1-217ENST00000559108 ARPC5O15511 151 aa8.14□□□□□ -1.11
TPM1-217ENST00000559108 ORM2P19652 201 aa8.14□□□□□ -1.11
TPM1-217ENST00000559108 NPPCP23582 126 aa8.14□□□□□ -1.11
TPM1-217ENST00000559108 EIF2B2P49770 351 aaKnown RBP8.14□□□□□ -1.11
TPM1-217ENST00000559108 PLP1P60201 277 aa8.14□□□□□ -1.11
TPM1-217ENST00000559108 ATP6V1FQ16864 119 aa8.14□□□□□ -1.11
TPM1-217ENST00000559108 OR1B1Q8NGR6 318 aa8.14□□□□□ -1.11
TPM1-217ENST00000559108 RSG1Q9BU20 258 aa8.14□□□□□ -1.11
TPM1-217ENST00000559108 GPR61Q9BZJ8 451 aa8.14□□□□□ -1.11
TPM1-217ENST00000559108 SLC25A32Q9H2D1 315 aa8.14□□□□□ -1.11
TPM1-217ENST00000559108 RABAC1Q9UI14 185 aa8.14□□□□□ -1.11
TPM1-217ENST00000559108 SMAD5-AS1Q9Y6J3 95 aa8.14□□□□□ -1.11
TPM1-217ENST00000559108 H3BRN7 92 aa8.13□□□□□ -1.11
TPM1-217ENST00000559108 TSPAN4O14817 238 aa8.13□□□□□ -1.11
TPM1-217ENST00000559108 EIF3GO75821 320 aaKnown RBP eCLIP8.13□□□□□ -1.11
TPM1-217ENST00000559108 CXCL2P19875 107 aa8.13□□□□□ -1.11
TPM1-217ENST00000559108 FGL1Q08830 312 aa8.13□□□□□ -1.11
TPM1-217ENST00000559108 ZNF124Q15973 351 aa8.13□□□□□ -1.11
TPM1-217ENST00000559108 GUCA2BQ16661 112 aa8.13□□□□□ -1.11
TPM1-217ENST00000559108 ODF3L2Q3SX64 289 aa8.13□□□□□ -1.11
TPM1-217ENST00000559108 LCN12Q6JVE5 192 aa8.13□□□□□ -1.11
TPM1-217ENST00000559108 ZNF546Q86UE3 836 aa8.13□□□□□ -1.11
TPM1-217ENST00000559108 GBGT1Q8N5D6 347 aa8.13□□□□□ -1.11
TPM1-217ENST00000559108 OR2K2Q8NGT1 345 aa8.13□□□□□ -1.11
TPM1-217ENST00000559108 CITED4Q96RK1 184 aa8.13□□□□□ -1.11
TPM1-217ENST00000559108 ARL6Q9H0F7 186 aa8.13□□□□□ -1.11
TPM1-217ENST00000559108 CYTL1Q9NRR1 136 aa8.13□□□□□ -1.11
TPM1-217ENST00000559108 PXMP4Q9Y6I8 212 aa8.13□□□□□ -1.11
TPM1-217ENST00000559108 MRPS12O15235 138 aaKnown RBP8.12□□□□□ -1.11
TPM1-217ENST00000559108 SCGB2A1O75556 95 aa8.12□□□□□ -1.11
TPM1-217ENST00000559108 RPL29P47914 159 aaKnown RBP8.12□□□□□ -1.11
TPM1-217ENST00000559108 TFPI2P48307 235 aa8.12□□□□□ -1.11
TPM1-217ENST00000559108 AP2S1P53680 142 aaPredicted RBP8.12□□□□□ -1.11
TPM1-217ENST00000559108 SELENOTP62341 195 aa8.12□□□□□ -1.11
TPM1-217ENST00000559108 SPATA31B1PQ5VZV4 182 aa8.12□□□□□ -1.11
TPM1-217ENST00000559108 RPL7L1Q6DKI1 246 aaKnown RBP8.12□□□□□ -1.11
TPM1-217ENST00000559108 TCTE3Q8IZS6 198 aa8.12□□□□□ -1.11
TPM1-217ENST00000559108 DCANP1Q8TF63 244 aa8.12□□□□□ -1.11
TPM1-217ENST00000559108 NEURL2Q9BR09 285 aa8.12□□□□□ -1.11
TPM1-217ENST00000559108 SHANK2-AS3Q9BTD1 123 aa8.12□□□□□ -1.11
TPM1-217ENST00000559108 SLC25A39Q9BZJ4 359 aaPredicted RBP8.12□□□□□ -1.11
TPM1-217ENST00000559108 ARV1Q9H2C2 271 aa8.12□□□□□ -1.11
TPM1-217ENST00000559108 MS4A6AQ9H2W1 248 aa8.12□□□□□ -1.11
TPM1-217ENST00000559108 SLC39A9Q9NUM3 307 aa8.12□□□□□ -1.11
TPM1-217ENST00000559108 AGRNO00468 2067 aa8.11□□□□□ -1.11
TPM1-217ENST00000559108 TRAV5A0A0B4J249 113 aa8.11□□□□□ -1.11
TPM1-217ENST00000559108 TRAV25A0A0B4J276 109 aa8.11□□□□□ -1.11
TPM1-217ENST00000559108 ZNF98A6NK75 572 aa8.11□□□□□ -1.11
TPM1-217ENST00000559108 K7EQG2 157 aa8.11□□□□□ -1.11
TPM1-217ENST00000559108 SOCS3O14543 225 aa8.11□□□□□ -1.11
TPM1-217ENST00000559108 FABP1P07148 127 aa8.11□□□□□ -1.11
TPM1-217ENST00000559108 OR5G3P0C626 314 aa8.11□□□□□ -1.11
TPM1-217ENST00000559108 DEFB1P60022 68 aa8.11□□□□□ -1.11
TPM1-217ENST00000559108 SH3BGRL3Q9H299 93 aa8.11□□□□□ -1.11
TPM1-217ENST00000559108 SLC25A22Q9H936 323 aa8.11□□□□□ -1.11
TPM1-217ENST00000559108 PLA2G2EQ9NZK7 142 aa8.11□□□□□ -1.11
TPM1-217ENST00000559108 UBQLN2Q9UHD9 624 aa8.11□□□□□ -1.11
TPM1-217ENST00000559108 HYPMO75409 117 aa8.1□□□□□ -1.11
TPM1-217ENST00000559108 SNRPCP09234 159 aaKnown RBP8.1□□□□□ -1.11
TPM1-217ENST00000559108 PRB4P10163 310 aaPredicted RBP8.1□□□□□ -1.11
TPM1-217ENST00000559108 CD81P60033 236 aa8.1□□□□□ -1.11
TPM1-217ENST00000559108 B2MP61769 119 aa8.1□□□□□ -1.11
TPM1-217ENST00000559108 SIGLEC15Q6ZMC9 328 aa8.1□□□□□ -1.11
TPM1-217ENST00000559108 RBPMS2Q6ZRY4 209 aaKnown RBP8.1□□□□□ -1.11
TPM1-217ENST00000559108 WFDC3Q8IUB2 231 aa8.1□□□□□ -1.11
TPM1-217ENST00000559108 DEFB125Q8N687 156 aa8.1□□□□□ -1.11
TPM1-217ENST00000559108 SPAG8Q99932 426 aaPredicted RBP8.1□□□□□ -1.11
TPM1-217ENST00000559108 PARD6GQ9BYG4 376 aaPredicted RBP8.1□□□□□ -1.11
TPM1-217ENST00000559108 MFFQ9GZY8 342 aa8.1□□□□□ -1.11
TPM1-217ENST00000559108 HIGD1AQ9Y241 93 aa8.1□□□□□ -1.11
TPM1-217ENST00000559108 HMSDA8MTL9 139 aa8.09□□□□□ -1.11
TPM1-217ENST00000559108 MPDU1O75352 247 aa8.09□□□□□ -1.11
TPM1-217ENST00000559108 CFDP00746 253 aaPredicted RBP8.09□□□□□ -1.11
TPM1-217ENST00000559108 ATP6V0CP27449 155 aa8.09□□□□□ -1.11
TPM1-217ENST00000559108 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.09□□□□□ -1.11
TPM1-217ENST00000559108 LINC00305Q7Z4B0 112 aa8.09□□□□□ -1.11
TPM1-217ENST00000559108 KCNRGQ8N5I3 272 aa8.09□□□□□ -1.11
TPM1-217ENST00000559108 HSD17B11Q8NBQ5 300 aa8.09□□□□□ -1.11
TPM1-217ENST00000559108 STXBP6Q8NFX7 210 aa8.09□□□□□ -1.11
TPM1-217ENST00000559108 MRAPQ8TCY5 172 aa8.09□□□□□ -1.11
TPM1-217ENST00000559108 FAM167A-AS1Q96KT0 104 aa8.09□□□□□ -1.11
TPM1-217ENST00000559108 MAP6D1Q9H9H5 199 aa8.09□□□□□ -1.11
TPM1-217ENST00000559108 SEPSECSQ9HD40 501 aaKnown RBP8.09□□□□□ -1.11
TPM1-217ENST00000559108 DNAH9Q9NYC9 4486 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 TRAV8-2A0A0B4J237 113 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 A0A1W2PS18 150 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 H3BQ15 152 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 H3BTX0 84 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 COX7A2P2O60397 106 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 IGHV4-30-4P0DP06 118 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 RAB2AP61019 212 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 RPL11P62913 178 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms