RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 AMMECR1Q9Y4X0 333 aaPredicted RBP3.88□□□□□ -1.79
CASC4-207ENST00000559037 IGHV3-43A0A0B4J1X8 118 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 CTXND1A0A1B0GTU2 59 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 UBE2L5PA0A1B0GUS4 154 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 A0A1W2PN81 502 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 RBFOX3A6NFN3 312 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 C15orf61A6NNL5 157 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 B4DEV8 164 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 H3BP45 60 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 CYB5BO43169 146 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 RAMP3O60896 148 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 IFNA10P01566 189 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 IGKV1-39P01597 117 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 IGKV1D-39P04432 117 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 IGHV3-43DP0DP04 118 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 FGF7P21781 194 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 NFYBP25208 207 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 MC5RP33032 325 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 CHRNA7P36544 502 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 CEACAM3P40198 252 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 SUB1P53999 127 aaKnown RBP eCLIP3.87□□□□□ -1.79
CASC4-207ENST00000559037 DLK1P80370 383 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 TMEM267Q0VDI3 215 aaPredicted RBP3.87□□□□□ -1.79
CASC4-207ENST00000559037 PNRC1Q12796 327 aaPredicted RBP3.87□□□□□ -1.79
CASC4-207ENST00000559037 EBI3Q14213 229 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 DIAPH2-AS1Q14236 149 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 POU2AF1Q16633 256 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 LTC4SQ16873 150 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 KPRPQ5T749 579 aaPredicted RBP3.87□□□□□ -1.79
CASC4-207ENST00000559037 OR8G2PQ6IF36 304 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 SLC25A48Q6ZT89 311 aaKnown RBP3.87□□□□□ -1.79
CASC4-207ENST00000559037 NDUFA11Q86Y39 141 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 LYG1Q8N1E2 194 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 LINC00311Q8N616 119 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 OR5AU1Q8NGC0 362 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 OR10X1Q8NGY0 326 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 OR5B3Q8NH48 314 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 UBALD1Q8TB05 177 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 SFT2D1Q8WV19 159 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 ST6GALNAC6Q969X2 333 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 CYYR1Q96J86 154 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 CITED2Q99967 270 aaPredicted RBP3.87□□□□□ -1.79
CASC4-207ENST00000559037 ACTR3CQ9C0K3 210 aaPredicted RBP3.87□□□□□ -1.79
CASC4-207ENST00000559037 WDR61Q9GZS3 305 aaKnown RBP3.87□□□□□ -1.79
CASC4-207ENST00000559037 SH3BGRL3Q9H299 93 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 WFDC1Q9HC57 220 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 FOXA2Q9Y261 457 aaPredicted RBP3.87□□□□□ -1.79
CASC4-207ENST00000559037 ZNF257Q9Y2Q1 563 aa3.87□□□□□ -1.79
CASC4-207ENST00000559037 A0A0G2JRQ6 117 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 A0A1W2PPE3 182 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 A0A1W2PPI3 338 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 SMCO3A2RU48 225 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 M0R036 132 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 AGPAT2O15120 278 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 TGOLN2O43493 480 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 TMEM50AO95807 157 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 IGHV3-7P01780 117 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 IFNA4P05014 189 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 SAA2P0DJI9 122 aaPredicted RBP3.86□□□□□ -1.79
CASC4-207ENST00000559037 CD1BP29016 333 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 PSMB3P49720 205 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 CRIP2P52943 208 aaPredicted RBP3.86□□□□□ -1.79
CASC4-207ENST00000559037 PAX9P55771 341 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 HSPE1P61604 102 aaKnown RBP3.86□□□□□ -1.79
CASC4-207ENST00000559037 RPL30P62888 115 aaKnown RBP3.86□□□□□ -1.79
CASC4-207ENST00000559037 FLI1Q01543 452 aaPredicted RBP3.86□□□□□ -1.79
CASC4-207ENST00000559037 VWC2Q2TAL6 325 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 VMA21Q3ZAQ7 101 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 FAM74A3Q4VXF1 159 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 OR2B11Q5JQS5 317 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 ZNF506Q5JVG8 444 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 FAM53AQ6NSI3 398 aaPredicted RBP3.86□□□□□ -1.79
CASC4-207ENST00000559037 Q75L30 129 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 SLC35E3Q7Z769 313 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 CENPVQ7Z7K6 275 aaPredicted RBP3.86□□□□□ -1.79
CASC4-207ENST00000559037 PDPNQ86YL7 162 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 C15orf54Q8N8G6 183 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 ZNF439Q8NDP4 499 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 MBD3L1Q8WWY6 194 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 LEAP2Q969E1 77 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 BTF3L4Q96K17 158 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 PARP12Q9H0J9 701 aaKnown RBP3.86□□□□□ -1.79
CASC4-207ENST00000559037 PLEKHA3Q9HB20 300 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 SLC35D1Q9NTN3 355 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 SLC39A9Q9NUM3 307 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 BET1LQ9NYM9 111 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 MLXQ9UH92 298 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 VAX2Q9UIW0 290 aa3.86□□□□□ -1.79
CASC4-207ENST00000559037 A0A087WWC5 75 aa3.85□□□□□ -1.79
CASC4-207ENST00000559037 IGHV1-3A0A0C4DH29 117 aa3.85□□□□□ -1.79
CASC4-207ENST00000559037 A0A1W2PPV4 95 aa3.85□□□□□ -1.79
CASC4-207ENST00000559037 MAP1LC3B2A6NCE7 125 aa3.85□□□□□ -1.79
CASC4-207ENST00000559037 PMS2P5A8MQ11 134 aa3.85□□□□□ -1.79
CASC4-207ENST00000559037 G3V4G9 280 aa3.85□□□□□ -1.79
CASC4-207ENST00000559037 TMEM250H0YL14 139 aa3.85□□□□□ -1.79
CASC4-207ENST00000559037 M0QZK8 103 aa3.85□□□□□ -1.79
CASC4-207ENST00000559037 SCO1O75880 301 aa3.85□□□□□ -1.79
CASC4-207ENST00000559037 GAS8-AS1O95177 125 aa3.85□□□□□ -1.79
CASC4-207ENST00000559037 IGHG2P01859 326 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms