RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 RHOGP84095 191 aa12.03□□□□□ -0.48
CDC42BPB-203ENST00000558867 DEFA5Q01523 94 aa12.03□□□□□ -0.48
CDC42BPB-203ENST00000558867 PMS2P11Q13670 270 aa12.03□□□□□ -0.48
CDC42BPB-203ENST00000558867 ZNF709Q8N972 641 aa12.03□□□□□ -0.48
CDC42BPB-203ENST00000558867 OR10W1Q8NGF6 305 aa12.03□□□□□ -0.48
CDC42BPB-203ENST00000558867 FAM213BQ8TBF2 198 aa12.03□□□□□ -0.48
CDC42BPB-203ENST00000558867 MBD3L1Q8WWY6 194 aa12.03□□□□□ -0.48
CDC42BPB-203ENST00000558867 GGTLC1Q9BX51 225 aa12.03□□□□□ -0.48
CDC42BPB-203ENST00000558867 HRH4Q9H3N8 390 aa12.03□□□□□ -0.48
CDC42BPB-203ENST00000558867 SMDT1Q9H4I9 107 aa12.03□□□□□ -0.48
CDC42BPB-203ENST00000558867 LOC102724200A0A096LPH7 203 aaPredicted RBP12.02□□□□□ -0.49
CDC42BPB-203ENST00000558867 TEX22C9J3V5 150 aa12.02□□□□□ -0.49
CDC42BPB-203ENST00000558867 CORTO00230 105 aa12.02□□□□□ -0.49
CDC42BPB-203ENST00000558867 BMPR1BO00238 502 aa12.02□□□□□ -0.49
CDC42BPB-203ENST00000558867 H2AFB1P0C5Y9 115 aa12.02□□□□□ -0.49
CDC42BPB-203ENST00000558867 APELAP0DMC3 54 aa12.02□□□□□ -0.49
CDC42BPB-203ENST00000558867 FOLR2P14207 255 aa12.02□□□□□ -0.49
CDC42BPB-203ENST00000558867 OPRK1P41145 380 aa12.02□□□□□ -0.49
CDC42BPB-203ENST00000558867 TNXAQ16473 311 aa12.02□□□□□ -0.49
CDC42BPB-203ENST00000558867 C10orf55Q5SWW7 151 aa12.02□□□□□ -0.49
CDC42BPB-203ENST00000558867 TEPPQ6URK8 271 aa12.02□□□□□ -0.49
CDC42BPB-203ENST00000558867 TMEM144Q7Z5S9 345 aa12.02□□□□□ -0.49
CDC42BPB-203ENST00000558867 RPRMQ9NS64 109 aa12.02□□□□□ -0.49
CDC42BPB-203ENST00000558867 RFNGQ9Y644 331 aa12.02□□□□□ -0.49
CDC42BPB-203ENST00000558867 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.01□□□□□ -0.49
CDC42BPB-203ENST00000558867 GGCTO75223 188 aaKnown RBP12.01□□□□□ -0.49
CDC42BPB-203ENST00000558867 CD5P06127 495 aa12.01□□□□□ -0.49
CDC42BPB-203ENST00000558867 FHITP49789 147 aa12.01□□□□□ -0.49
CDC42BPB-203ENST00000558867 RAB2AP61019 212 aa12.01□□□□□ -0.49
CDC42BPB-203ENST00000558867 SPSB3Q6PJ21 355 aa12.01□□□□□ -0.49
CDC42BPB-203ENST00000558867 NECAP1Q8NC96 275 aa12.01□□□□□ -0.49
CDC42BPB-203ENST00000558867 OR1L6Q8NGR2 347 aa12.01□□□□□ -0.49
CDC42BPB-203ENST00000558867 OR1P1Q8NH06 330 aa12.01□□□□□ -0.49
CDC42BPB-203ENST00000558867 SRSF12Q8WXF0 261 aaKnown RBP12.01□□□□□ -0.49
CDC42BPB-203ENST00000558867 WFDC10AQ9H1F0 79 aa12.01□□□□□ -0.49
CDC42BPB-203ENST00000558867 C2orf70A6NJV1 201 aa12□□□□□ -0.49
CDC42BPB-203ENST00000558867 LGALS9O00182 355 aa12□□□□□ -0.49
CDC42BPB-203ENST00000558867 OR13C7P0DN81 318 aa12□□□□□ -0.49
CDC42BPB-203ENST00000558867 RPL29P47914 159 aaKnown RBP12□□□□□ -0.49
CDC42BPB-203ENST00000558867 RAB31Q13636 194 aa12□□□□□ -0.49
CDC42BPB-203ENST00000558867 ETFRF1Q6IPR1 90 aa12□□□□□ -0.49
CDC42BPB-203ENST00000558867 CEMP1Q6PRD7 247 aaPredicted RBP12□□□□□ -0.49
CDC42BPB-203ENST00000558867 MGST2Q99735 147 aa12□□□□□ -0.49
CDC42BPB-203ENST00000558867 OVOL2Q9BRP0 275 aa12□□□□□ -0.49
CDC42BPB-203ENST00000558867 SCRT1Q9BWW7 348 aa12□□□□□ -0.49
CDC42BPB-203ENST00000558867 F11RQ9Y624 299 aaKnown RBP12□□□□□ -0.49
CDC42BPB-203ENST00000558867 NDUFS6O75380 124 aaKnown RBP11.99□□□□□ -0.49
CDC42BPB-203ENST00000558867 CRYGCP07315 174 aa11.99□□□□□ -0.49
CDC42BPB-203ENST00000558867 M6PRP20645 277 aa11.99□□□□□ -0.49
CDC42BPB-203ENST00000558867 ACOT6Q3I5F7 207 aaPredicted RBP11.99□□□□□ -0.49
CDC42BPB-203ENST00000558867 FAM106AQ4KMX7 169 aa11.99□□□□□ -0.49
CDC42BPB-203ENST00000558867 PBDC1Q9BVG4 233 aa11.99□□□□□ -0.49
CDC42BPB-203ENST00000558867 FRAS1Q86XX4 4008 aa11.99□□□□□ -0.49
CDC42BPB-203ENST00000558867 TRBV9A0A0B4J1U6 114 aa11.98□□□□□ -0.49
CDC42BPB-203ENST00000558867 CTXND1A0A1B0GTU2 59 aa11.98□□□□□ -0.49
CDC42BPB-203ENST00000558867 BMI1P35226 326 aa11.98□□□□□ -0.49
CDC42BPB-203ENST00000558867 APOC4P55056 127 aa11.98□□□□□ -0.49
CDC42BPB-203ENST00000558867 GAMTQ14353 236 aa11.98□□□□□ -0.49
CDC42BPB-203ENST00000558867 C15orf32Q32M92 178 aa11.98□□□□□ -0.49
CDC42BPB-203ENST00000558867 FFAR4Q5NUL3 377 aa11.98□□□□□ -0.49
CDC42BPB-203ENST00000558867 C10orf91Q5T1B1 145 aa11.98□□□□□ -0.49
CDC42BPB-203ENST00000558867 RPP25LQ8N5L8 163 aaKnown RBP11.98□□□□□ -0.49
CDC42BPB-203ENST00000558867 SLC35E1Q96K37 410 aa11.98□□□□□ -0.49
CDC42BPB-203ENST00000558867 TP53TG1Q9Y2A0 90 aa11.98□□□□□ -0.49
CDC42BPB-203ENST00000558867 A0A0J9YWU9 116 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 TMEM218A2RU14 115 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 SMCO3A2RU48 225 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 NPIPB5A8MRT5 1133 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 AGPAT2O15120 278 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 CTRB1P17538 263 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 ATF4P18848 351 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 CBLN1P23435 193 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 PRR20EP86478 221 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 PRR20CP86479 221 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 PRR20DP86480 221 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 PRR20BP86481 221 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 PRR20AP86496 221 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 AKR1C1Q04828 323 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 ZNF726P1Q15940 193 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 KLK9Q2XQG4 91 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 CTRB2Q6GPI1 263 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 GPHB5Q86YW7 130 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 WFDC3Q8IUB2 231 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 TTC9CQ8N5M4 171 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 THAP8Q8NA92 274 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 BPIFCQ8NFQ6 507 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 LINC00052Q96N35 136 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 ACTR3CQ9C0K3 210 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 VSIRQ9H7M9 311 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 KLK9Q9UKQ9 250 aa11.97□□□□□ -0.49
CDC42BPB-203ENST00000558867 ZNF320A2RRD8 509 aa11.96□□□□□ -0.49
CDC42BPB-203ENST00000558867 UBE2CO00762 179 aa11.96□□□□□ -0.49
CDC42BPB-203ENST00000558867 CYB5BO43169 146 aa11.96□□□□□ -0.49
CDC42BPB-203ENST00000558867 OR2C1O95371 312 aa11.96□□□□□ -0.49
CDC42BPB-203ENST00000558867 AREGP15514 252 aa11.96□□□□□ -0.49
CDC42BPB-203ENST00000558867 PEA15Q15121 130 aa11.96□□□□□ -0.49
CDC42BPB-203ENST00000558867 GUK1Q16774 197 aa11.96□□□□□ -0.49
CDC42BPB-203ENST00000558867 RBPMS2Q6ZRY4 209 aaKnown RBP11.96□□□□□ -0.49
CDC42BPB-203ENST00000558867 Q6ZWC4 215 aa11.96□□□□□ -0.49
CDC42BPB-203ENST00000558867 TMEM116Q8NCL8 245 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms