RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 BSXQ3C1V8 233 aa3.12□□□□□ -1.91
SPG11-211ENST00000558561 PRSS54Q6PEW0 395 aa3.12□□□□□ -1.91
SPG11-211ENST00000558561 APRG1Q8IVJ8 170 aa3.12□□□□□ -1.91
SPG11-211ENST00000558561 STPG4Q8N801 248 aa3.12□□□□□ -1.91
SPG11-211ENST00000558561 CCDC71LQ8N9Z2 235 aa3.12□□□□□ -1.91
SPG11-211ENST00000558561 OR1P1Q8NH06 330 aa3.12□□□□□ -1.91
SPG11-211ENST00000558561 OR5B3Q8NH48 314 aa3.12□□□□□ -1.91
SPG11-211ENST00000558561 VN1R17PQ8TDU5 208 aa3.12□□□□□ -1.91
SPG11-211ENST00000558561 RBPMSQ93062 196 aaKnown RBP3.12□□□□□ -1.91
SPG11-211ENST00000558561 GALNT14Q96FL9 552 aa3.12□□□□□ -1.91
SPG11-211ENST00000558561 OR10C1Q96KK4 312 aa3.12□□□□□ -1.91
SPG11-211ENST00000558561 PRRT1Q99946 306 aa3.12□□□□□ -1.91
SPG11-211ENST00000558561 SEC22CQ9BRL7 303 aa3.12□□□□□ -1.91
SPG11-211ENST00000558561 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.12□□□□□ -1.91
SPG11-211ENST00000558561 SLC2A8Q9NY64 477 aa3.12□□□□□ -1.91
SPG11-211ENST00000558561 SMPXQ9UHP9 88 aa3.12□□□□□ -1.91
SPG11-211ENST00000558561 STARD9Q9P2P6 4700 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 IGKV1OR2-108A0A075B7D4 117 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 PMS2P5A8MQ11 134 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 CEBPZOSA8MTT3 80 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 OR11H12B2RN74 326 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 SMIM1B2RUZ4 78 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 WRBO00258 174 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 CCSO14618 274 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 NUPL2O15504 423 aaKnown RBP3.11□□□□□ -1.91
SPG11-211ENST00000558561 CREBL2O60519 120 aaPredicted RBP3.11□□□□□ -1.91
SPG11-211ENST00000558561 NOL3O60936 208 aaKnown RBP3.11□□□□□ -1.91
SPG11-211ENST00000558561 DFFBO76075 338 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 YIF1AO95070 293 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 NDUFB6O95139 128 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 OR4E1P0C645 316 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 CFC1BP0CG36 223 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 CFC1P0CG37 223 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 RPL35AP18077 110 aaKnown RBP3.11□□□□□ -1.91
SPG11-211ENST00000558561 SNCAP37840 140 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 SPCS3P61009 180 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 POLR2GP62487 172 aaKnown RBP eCLIP3.11□□□□□ -1.91
SPG11-211ENST00000558561 ZNF90Q03938 601 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 TNFRSF9Q07011 255 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 OR2F1Q13607 317 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 SURF2Q15527 256 aaPredicted RBP3.11□□□□□ -1.91
SPG11-211ENST00000558561 TATDN3Q17R31 274 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 FAM106AQ4KMX7 169 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 AARDQ4LEZ3 155 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 TRPT1Q86TN4 253 aaKnown RBP3.11□□□□□ -1.91
SPG11-211ENST00000558561 SGPP2Q8IWX5 399 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 RNASE11Q8TAA1 199 aaKnown RBP3.11□□□□□ -1.91
SPG11-211ENST00000558561 C15orf40Q8WUR7 153 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 TMEM190Q8WZ59 177 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 BORCS5Q969J3 196 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 BSCL2Q96G97 398 aaPredicted RBP3.11□□□□□ -1.91
SPG11-211ENST00000558561 CXorf58Q96LI9 332 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 RHPN1-AS1Q9BWJ2 59 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 FKBP11Q9NYL4 201 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 SIGLEC8Q9NYZ4 499 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 MRPL27Q9P0M9 148 aaKnown RBP3.11□□□□□ -1.91
SPG11-211ENST00000558561 SCP2D1Q9UJQ7 156 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 TBC1D24Q9ULP9 559 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 KCNIP3Q9Y2W7 256 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 PUS1Q9Y606 427 aaKnown RBP eCLIP3.11□□□□□ -1.91
SPG11-211ENST00000558561 U3KQK5 164 aa3.11□□□□□ -1.91
SPG11-211ENST00000558561 TRAV14DV4A0A0A6YYC5 116 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 A0A0B4J2A0 478 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 IGHV7-4-1A0A0J9YVY3 117 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 A8MWP6 167 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 PRSS46E5RG02 174 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 INS-IGF2F8WCM5 200 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 H3BP45 60 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 NDUFA4O00483 81 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 GNG7O60262 68 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 CLN5O75503 358 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 SIX6O95475 246 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 DHFRP00374 187 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 TCRBP04435 133 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 SNRPCP09234 159 aaKnown RBP3.1□□□□□ -1.91
SPG11-211ENST00000558561 IGLC1P0CG04 106 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 SULT1A3P0DMM9 295 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 SULT1A4P0DMN0 295 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 S100GP29377 79 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 RND2P52198 227 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 DHRS2Q13268 280 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 GAMTQ14353 236 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 SMCO1Q147U7 214 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 USF2Q15853 346 aaPredicted RBP3.1□□□□□ -1.91
SPG11-211ENST00000558561 C2orf83Q53S99 150 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 TMEM128Q5BJH2 165 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 SPANXN2Q5MJ10 180 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 LEMD1Q68G75 181 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 ZFAND6Q6FIF0 208 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 LGI3Q8N145 548 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 CENPSQ8N2Z9 138 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 DUSP18Q8NEJ0 188 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 OR52E5Q8NH55 327 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 OR1S1Q8NH92 325 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 DYNLRB2Q8TF09 96 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 ACY3Q96HD9 319 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 RCHY1Q96PM5 261 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 TSC22D3Q99576 134 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 TM2D3Q9BRN9 247 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 GPR61Q9BZJ8 451 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms