RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 A0A1W2PS18 150 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 IZUMO1RA6ND01 250 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 NPIPB5A8MRT5 1133 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 SNURFLB1AK76 121 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 H3BUT2 72 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 WNT9BO14905 357 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 NUPR1O60356 82 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 COX7A2P2O60397 106 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 HSBP1O75506 76 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 CA1P00915 261 aaPredicted RBP4.47□□□□□ -1.69
GABPB1-207ENST00000558335 CELA3BP08861 270 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 COX8AP10176 69 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 ATP5G3P48201 142 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 EMP1P54849 157 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 BRWD1-AS2P59051 145 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 CD69Q07108 199 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 HES1Q14469 280 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 TRIP6Q15654 476 aaKnown RBP4.47□□□□□ -1.69
GABPB1-207ENST00000558335 C3AR1Q16581 482 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 VMA21Q3ZAQ7 101 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 GAGE13Q4V321 117 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 IBA57Q5T440 356 aaKnown RBP4.47□□□□□ -1.69
GABPB1-207ENST00000558335 LYRM7Q5U5X0 104 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 TEX36Q5VZQ5 186 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 MIC13Q5XKP0 118 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 Q6AWC8 147 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 ZNF826PQ6ZT77 177 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 LINC00311Q8N616 119 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 Q8N7P7 452 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 OR4C13Q8NGP0 309 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 OR10J6PQ8NGY7 276 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 KIR2DL5BQ8NHK3 375 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 RFESDQ8TAC1 157 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 OCC1Q8TAD7 63 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 FLYWCH2Q96CP2 140 aaKnown RBP4.47□□□□□ -1.69
GABPB1-207ENST00000558335 NABP2Q9BQ15 211 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 SRSF8Q9BRL6 282 aaKnown RBP4.47□□□□□ -1.69
GABPB1-207ENST00000558335 PPDPFQ9H3Y8 114 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 SAP30LQ9HAJ7 183 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 RPUSD1Q9UJJ7 312 aaKnown RBP4.47□□□□□ -1.69
GABPB1-207ENST00000558335 AMMECR1Q9Y4X0 333 aaPredicted RBP4.47□□□□□ -1.69
GABPB1-207ENST00000558335 C5orf42Q9H799 3197 aa4.47□□□□□ -1.69
GABPB1-207ENST00000558335 CEP290O15078 2479 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 MED12Q93074 2177 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 IGHV3-43A0A0B4J1X8 118 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 SCO2A0A1W2PP80 73 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 A0A1W2PRD5 423 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 A0A1W2PRF3 423 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 A0A1W2PRM7 423 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 SMIM27A0A1W2PRY6 76 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 DEFB108AA8MXU0 73 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 RRHO14718 337 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 NDUFB3O43676 98 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 AVPP01185 164 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 APCSP02743 223 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 ATP5G1P05496 136 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 CRYGDP07320 174 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 SAA2P0DJI9 122 aaPredicted RBP4.46□□□□□ -1.7
GABPB1-207ENST00000558335 IGHV3-43DP0DP04 118 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 CCL11P51671 97 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 UBE2L3P68036 154 aaKnown RBP4.46□□□□□ -1.7
GABPB1-207ENST00000558335 ATP5G2Q06055 141 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 FOXC1Q12948 553 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 RTP5Q14D33 572 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 CENPWQ5EE01 88 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 MEIG1Q5JSS6 88 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 C10orf113Q5VZT2 155 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 Q6ZR03 302 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 TMEM136Q6ZRR5 245 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 ZNF833PQ6ZTB9 187 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 ABHD12Q8N2K0 398 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 TPRX1Q8N7U7 411 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 C9orf106Q8NAJ2 232 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 OR11H6Q8NGC7 330 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 UBALD1Q8TB05 177 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 TMEM167AQ8TBQ9 72 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 RPEQ96AT9 228 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 RNF5Q99942 180 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 TM2D2Q9BX73 214 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 CLEC7AQ9BXN2 247 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 GFRA4Q9GZZ7 299 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 SCRT2Q9NQ03 307 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 PRO0628Q9UI54 55 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 V9GYY9 64 aa4.46□□□□□ -1.7
GABPB1-207ENST00000558335 MED12LQ86YW9 2145 aa4.45□□□□□ -1.7
GABPB1-207ENST00000558335 TEX50A0A1B0GTY4 177 aa4.45□□□□□ -1.7
GABPB1-207ENST00000558335 A0A1B0GUS0 222 aa4.45□□□□□ -1.7
GABPB1-207ENST00000558335 TCRBV4S1A1TA0A5B7 111 aa4.45□□□□□ -1.7
GABPB1-207ENST00000558335 A8MWL6 223 aa4.45□□□□□ -1.7
GABPB1-207ENST00000558335 VWC2LB2RUY7 222 aa4.45□□□□□ -1.7
GABPB1-207ENST00000558335 GGTLC3B5MD39 225 aa4.45□□□□□ -1.7
GABPB1-207ENST00000558335 SYS1-DBNDD2H3BUS1 97 aa4.45□□□□□ -1.7
GABPB1-207ENST00000558335 M0R1B8 84 aa4.45□□□□□ -1.7
GABPB1-207ENST00000558335 CDX4O14627 284 aaPredicted RBP4.45□□□□□ -1.7
GABPB1-207ENST00000558335 ACTL6BO94805 426 aa4.45□□□□□ -1.7
GABPB1-207ENST00000558335 AGFG2O95081 481 aa4.45□□□□□ -1.7
GABPB1-207ENST00000558335 TNFRSF6BO95407 300 aa4.45□□□□□ -1.7
GABPB1-207ENST00000558335 FSTL3O95633 263 aa4.45□□□□□ -1.7
GABPB1-207ENST00000558335 RBP4P02753 201 aa4.45□□□□□ -1.7
GABPB1-207ENST00000558335 NTF3P20783 257 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms