RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 IL7P13232 177 aa8.64□□□□□ -1.03
HERC1-202ENST00000558324 HLA-DRB4P13762 266 aa8.64□□□□□ -1.03
HERC1-202ENST00000558324 MIFP14174 115 aa8.64□□□□□ -1.03
HERC1-202ENST00000558324 BTCP35070 178 aa8.64□□□□□ -1.03
HERC1-202ENST00000558324 FXYD7P58549 80 aa8.64□□□□□ -1.03
HERC1-202ENST00000558324 NUTF2P61970 127 aaKnown RBP8.64□□□□□ -1.03
HERC1-202ENST00000558324 CSNK1G2-AS1Q8NCQ2 148 aa8.64□□□□□ -1.03
HERC1-202ENST00000558324 SEPSECSQ9HD40 501 aaKnown RBP8.64□□□□□ -1.03
HERC1-202ENST00000558324 PSENENQ9NZ42 101 aa8.64□□□□□ -1.03
HERC1-202ENST00000558324 HLA-DRB4X5D2U9 266 aa8.64□□□□□ -1.03
HERC1-202ENST00000558324 AGRNO00468 2067 aa8.63□□□□□ -1.03
HERC1-202ENST00000558324 ZNF705EA8MWA4 302 aaPredicted RBP8.63□□□□□ -1.03
HERC1-202ENST00000558324 DEDDO75618 318 aa8.63□□□□□ -1.03
HERC1-202ENST00000558324 ORM2P19652 201 aa8.63□□□□□ -1.03
HERC1-202ENST00000558324 ID1P41134 155 aa8.63□□□□□ -1.03
HERC1-202ENST00000558324 NKX2-1P43699 371 aaPredicted RBP8.63□□□□□ -1.03
HERC1-202ENST00000558324 PSMB3P49720 205 aa8.63□□□□□ -1.03
HERC1-202ENST00000558324 ID3Q02535 119 aa8.63□□□□□ -1.03
HERC1-202ENST00000558324 C1orf194Q5T5A4 169 aa8.63□□□□□ -1.03
HERC1-202ENST00000558324 TMEM182Q6ZP80 229 aaPredicted RBP8.63□□□□□ -1.03
HERC1-202ENST00000558324 BPIFCQ8NFQ6 507 aa8.63□□□□□ -1.03
HERC1-202ENST00000558324 OR4D5Q8NGN0 318 aa8.63□□□□□ -1.03
HERC1-202ENST00000558324 OR1B1Q8NGR6 318 aa8.63□□□□□ -1.03
HERC1-202ENST00000558324 C1QTNF4Q9BXJ3 329 aa8.63□□□□□ -1.03
HERC1-202ENST00000558324 SLC25A32Q9H2D1 315 aa8.63□□□□□ -1.03
HERC1-202ENST00000558324 DOK5Q9P104 306 aa8.63□□□□□ -1.03
HERC1-202ENST00000558324 IGHV3OR16-12A0A075B7B8 117 aa8.62□□□□□ -1.03
HERC1-202ENST00000558324 ELOA3CA0A087WX78 387 aaPredicted RBP8.62□□□□□ -1.03
HERC1-202ENST00000558324 IGLL5B9A064 214 aa8.62□□□□□ -1.03
HERC1-202ENST00000558324 F6UB75 175 aa8.62□□□□□ -1.03
HERC1-202ENST00000558324 SOCS3O14543 225 aa8.62□□□□□ -1.03
HERC1-202ENST00000558324 CCNKO75909 580 aa8.62□□□□□ -1.03
HERC1-202ENST00000558324 HLA-DMBP28068 263 aa8.62□□□□□ -1.03
HERC1-202ENST00000558324 RRAS2P62070 204 aaPredicted RBP8.62□□□□□ -1.03
HERC1-202ENST00000558324 IAH1Q2TAA2 248 aaPredicted RBP8.62□□□□□ -1.03
HERC1-202ENST00000558324 Q6ZTC4 211 aa8.62□□□□□ -1.03
HERC1-202ENST00000558324 ZNF767PQ75MW2 155 aa8.62□□□□□ -1.03
HERC1-202ENST00000558324 RPP25LQ8N5L8 163 aaKnown RBP8.62□□□□□ -1.03
HERC1-202ENST00000558324 OR4B1Q8NGF8 309 aa8.62□□□□□ -1.03
HERC1-202ENST00000558324 C2CD4CQ8TF44 421 aa8.62□□□□□ -1.03
HERC1-202ENST00000558324 C7orf50Q9BRJ6 194 aaKnown RBP8.62□□□□□ -1.03
HERC1-202ENST00000558324 TMEM147Q9BVK8 224 aa8.62□□□□□ -1.03
HERC1-202ENST00000558324 C20orf85Q9H1P6 137 aa8.62□□□□□ -1.03
HERC1-202ENST00000558324 SAV1Q9H4B6 383 aaPredicted RBP8.62□□□□□ -1.03
HERC1-202ENST00000558324 CELA1Q9UNI1 258 aa8.62□□□□□ -1.03
HERC1-202ENST00000558324 BIRC6Q9NR09 4857 aa8.62□□□□□ -1.03
HERC1-202ENST00000558324 ZNF98A6NK75 572 aa8.61□□□□□ -1.03
HERC1-202ENST00000558324 CCSO14618 274 aa8.61□□□□□ -1.03
HERC1-202ENST00000558324 CFDP00746 253 aaPredicted RBP8.61□□□□□ -1.03
HERC1-202ENST00000558324 METTL15P1P0C7V9 234 aa8.61□□□□□ -1.03
HERC1-202ENST00000558324 GALR1P47211 349 aa8.61□□□□□ -1.03
HERC1-202ENST00000558324 FOXI2Q6ZQN5 318 aa8.61□□□□□ -1.03
HERC1-202ENST00000558324 C16orf92Q96LL3 132 aa8.61□□□□□ -1.03
HERC1-202ENST00000558324 RSG1Q9BU20 258 aa8.61□□□□□ -1.03
HERC1-202ENST00000558324 SCRT1Q9BWW7 348 aa8.61□□□□□ -1.03
HERC1-202ENST00000558324 HRH4Q9H3N8 390 aa8.61□□□□□ -1.03
HERC1-202ENST00000558324 GSKIPQ9P0R6 139 aa8.61□□□□□ -1.03
HERC1-202ENST00000558324 TRAV6A0A075B6T7 132 aa8.6□□□□□ -1.03
HERC1-202ENST00000558324 ISLRO14498 428 aa8.6□□□□□ -1.03
HERC1-202ENST00000558324 PLA2G10O15496 165 aa8.6□□□□□ -1.03
HERC1-202ENST00000558324 LYRM1O43325 122 aa8.6□□□□□ -1.03
HERC1-202ENST00000558324 IL5P05113 134 aa8.6□□□□□ -1.03
HERC1-202ENST00000558324 EMP1P54849 157 aa8.6□□□□□ -1.03
HERC1-202ENST00000558324 LGALS9CQ6DKI2 356 aa8.6□□□□□ -1.03
HERC1-202ENST00000558324 EBLN2Q6P2I7 272 aa8.6□□□□□ -1.03
HERC1-202ENST00000558324 CYP2G1PQ6ZSU1 146 aa8.6□□□□□ -1.03
HERC1-202ENST00000558324 TMEM144Q7Z5S9 345 aa8.6□□□□□ -1.03
HERC1-202ENST00000558324 SMIM8Q96KF7 97 aa8.6□□□□□ -1.03
HERC1-202ENST00000558324 C20orf173Q96LM9 149 aa8.6□□□□□ -1.03
HERC1-202ENST00000558324 SLC35B3Q9H1N7 401 aa8.6□□□□□ -1.03
HERC1-202ENST00000558324 PMS2P5A8MQ11 134 aa8.59□□□□□ -1.03
HERC1-202ENST00000558324 C11orf94C9JXX5 98 aa8.59□□□□□ -1.03
HERC1-202ENST00000558324 LINC00869P0C866 280 aa8.59□□□□□ -1.03
HERC1-202ENST00000558324 MEOX2P50222 304 aa8.59□□□□□ -1.03
HERC1-202ENST00000558324 PAX9P55771 341 aa8.59□□□□□ -1.03
HERC1-202ENST00000558324 FGL1Q08830 312 aa8.59□□□□□ -1.03
HERC1-202ENST00000558324 FAM78BQ5VT40 261 aa8.59□□□□□ -1.03
HERC1-202ENST00000558324 IGFL4Q6B9Z1 124 aa8.59□□□□□ -1.03
HERC1-202ENST00000558324 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.59□□□□□ -1.03
HERC1-202ENST00000558324 ZNF709Q8N972 641 aa8.59□□□□□ -1.03
HERC1-202ENST00000558324 ZBTB8BQ8NAP8 495 aaPredicted RBP8.59□□□□□ -1.03
HERC1-202ENST00000558324 MITD1Q8WV92 249 aa8.59□□□□□ -1.03
HERC1-202ENST00000558324 RPRMQ9NS64 109 aa8.59□□□□□ -1.03
HERC1-202ENST00000558324 SLC45A2Q9UMX9 530 aa8.59□□□□□ -1.03
HERC1-202ENST00000558324 RCL1Q9Y2P8 373 aaKnown RBP8.59□□□□□ -1.03
HERC1-202ENST00000558324 TRAV10A0A0B4J240 114 aa8.58□□□□□ -1.04
HERC1-202ENST00000558324 FAM25EA8MYX2 175 aa8.58□□□□□ -1.04
HERC1-202ENST00000558324 H3BRN7 92 aa8.58□□□□□ -1.04
HERC1-202ENST00000558324 OR5G3P0C626 314 aa8.58□□□□□ -1.04
HERC1-202ENST00000558324 RAP2BP61225 183 aa8.58□□□□□ -1.04
HERC1-202ENST00000558324 DLK1P80370 383 aa8.58□□□□□ -1.04
HERC1-202ENST00000558324 SLC38A11Q08AI6 406 aa8.58□□□□□ -1.04
HERC1-202ENST00000558324 SAMD13Q5VXD3 122 aa8.58□□□□□ -1.04
HERC1-202ENST00000558324 TMEM14EPQ6UXP3 125 aa8.58□□□□□ -1.04
HERC1-202ENST00000558324 RNF182Q8N6D2 247 aa8.58□□□□□ -1.04
HERC1-202ENST00000558324 OR10P1Q8NGE3 313 aa8.58□□□□□ -1.04
HERC1-202ENST00000558324 C17orf77Q96MU5 243 aa8.58□□□□□ -1.04
HERC1-202ENST00000558324 UHRF2Q96PU4 802 aa8.58□□□□□ -1.04
HERC1-202ENST00000558324 SEC22CQ9BRL7 303 aa8.58□□□□□ -1.04
HERC1-202ENST00000558324 SLC25A39Q9BZJ4 359 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms