RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 C5orf64Q2M2E5 130 aa6.61□□□□□ -1.35
SPG11-209ENST00000558253 KLK9Q2XQG4 91 aa6.61□□□□□ -1.35
SPG11-209ENST00000558253 COL5A1-AS1Q5SY13 56 aa6.61□□□□□ -1.35
SPG11-209ENST00000558253 BPIFA4PQ86YQ2 179 aa6.61□□□□□ -1.35
SPG11-209ENST00000558253 OR8I2Q8N0Y5 310 aa6.61□□□□□ -1.35
SPG11-209ENST00000558253 TTC9CQ8N5M4 171 aa6.61□□□□□ -1.35
SPG11-209ENST00000558253 OR4B1Q8NGF8 309 aa6.61□□□□□ -1.35
SPG11-209ENST00000558253 FBXL15Q9H469 300 aa6.61□□□□□ -1.35
SPG11-209ENST00000558253 LPAR2Q9HBW0 351 aa6.61□□□□□ -1.35
SPG11-209ENST00000558253 SERTAD4Q9NUC0 356 aa6.61□□□□□ -1.35
SPG11-209ENST00000558253 KLK9Q9UKQ9 250 aa6.61□□□□□ -1.35
SPG11-209ENST00000558253 CUL9Q8IWT3 2517 aa6.61□□□□□ -1.35
SPG11-209ENST00000558253 SVILO95425 2214 aa6.61□□□□□ -1.35
SPG11-209ENST00000558253 A6NNC1 897 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 LTAP01374 205 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 APCSP02743 223 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 PYYP10082 97 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 PSG1P11464 419 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 HNF1AP20823 631 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 CBLN1P23435 193 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 FCGR2BP31994 310 aaPredicted RBP6.6□□□□□ -1.35
SPG11-209ENST00000558253 MFAP4P55083 255 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 ARF6P62330 175 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 OR5I1Q13606 314 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 PDE6HQ13956 83 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 MORN5Q5VZ52 161 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 TMEM136Q6ZRR5 245 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 BAGE3Q86Y29 109 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 OR4F17Q8NGA8 305 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 DAZAP1Q96EP5 407 aaKnown RBP6.6□□□□□ -1.35
SPG11-209ENST00000558253 MS4A10Q96PG2 267 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 MIEN1Q9BRT3 115 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 SHANK2-AS3Q9BTD1 123 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 MLST8Q9BVC4 326 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 SLC25A39Q9BZJ4 359 aaPredicted RBP6.6□□□□□ -1.35
SPG11-209ENST00000558253 PRORYQ9H606 182 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 MRPL36Q9P0J6 103 aaKnown RBP6.6□□□□□ -1.35
SPG11-209ENST00000558253 ZFP30Q9Y2G7 519 aa6.6□□□□□ -1.35
SPG11-209ENST00000558253 ZFHX2Q9C0A1 2572 aaPredicted RBP6.59□□□□□ -1.35
SPG11-209ENST00000558253 A0A1B0GW15 77 aa6.59□□□□□ -1.35
SPG11-209ENST00000558253 WI2-2373I1.2A0A1W2PRP0 233 aa6.59□□□□□ -1.35
SPG11-209ENST00000558253 K7EIM0 57 aa6.59□□□□□ -1.35
SPG11-209ENST00000558253 OR2J3O76001 311 aa6.59□□□□□ -1.35
SPG11-209ENST00000558253 TCRAP04437 139 aa6.59□□□□□ -1.35
SPG11-209ENST00000558253 SNRPCP09234 159 aaKnown RBP6.59□□□□□ -1.35
SPG11-209ENST00000558253 CNTFRP26992 372 aa6.59□□□□□ -1.35
SPG11-209ENST00000558253 G0S2P27469 103 aa6.59□□□□□ -1.35
SPG11-209ENST00000558253 RAB9AP51151 201 aa6.59□□□□□ -1.35
SPG11-209ENST00000558253 UBE2E1P51965 193 aa6.59□□□□□ -1.35
SPG11-209ENST00000558253 RPS20P60866 119 aaKnown RBP6.59□□□□□ -1.35
SPG11-209ENST00000558253 SSBP2P81877 361 aaPredicted RBP6.59□□□□□ -1.35
SPG11-209ENST00000558253 Q8N6K4 173 aa6.59□□□□□ -1.35
SPG11-209ENST00000558253 NUDT10Q8NFP7 164 aa6.59□□□□□ -1.35
SPG11-209ENST00000558253 VN1R17PQ8TDU5 208 aa6.59□□□□□ -1.35
SPG11-209ENST00000558253 NUDT11Q96G61 164 aa6.59□□□□□ -1.35
SPG11-209ENST00000558253 FANCD2OSQ96PS1 177 aa6.59□□□□□ -1.35
SPG11-209ENST00000558253 ATP6V0BQ99437 205 aa6.59□□□□□ -1.35
SPG11-209ENST00000558253 PRSS22Q9GZN4 317 aa6.59□□□□□ -1.35
SPG11-209ENST00000558253 RNASE7Q9H1E1 156 aaKnown RBP6.59□□□□□ -1.35
SPG11-209ENST00000558253 Q9H3A6 140 aa6.59□□□□□ -1.35
SPG11-209ENST00000558253 RPP21Q9H633 154 aaKnown RBP6.59□□□□□ -1.35
SPG11-209ENST00000558253 NAGKQ9UJ70 344 aa6.59□□□□□ -1.35
SPG11-209ENST00000558253 FRYQ5TBA9 3013 aa6.59□□□□□ -1.35
SPG11-209ENST00000558253 PLCE1Q9P212 2302 aa6.59□□□□□ -1.36
SPG11-209ENST00000558253 DIDO1Q9BTC0 2240 aaKnown RBP6.58□□□□□ -1.36
SPG11-209ENST00000558253 IGLV11-55A0A075B6I3 123 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 TMEM8BA6NDV4 472 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 H3BRN7 92 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 ZNF253O75346 499 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 IGKV1-17P01599 117 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 P01737 135 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 LYZP61626 148 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 PSG9Q00887 426 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 KLF5Q13887 457 aaPredicted RBP6.58□□□□□ -1.36
SPG11-209ENST00000558253 HES1Q14469 280 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 Q6AWC8 147 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 UNQ6494/PRO21346Q6UXR6 183 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 C19orf35Q6ZS72 473 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 SMIM15Q7Z3B0 74 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 VMO1Q7Z5L0 202 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 SIGLECL1Q8N7X8 197 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 TMEM75Q8N9X5 138 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 ORAOV1Q8WV07 137 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 BLNKQ8WV28 456 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 ARPC1AQ92747 370 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 POLR3KQ9Y2Y1 108 aaPredicted RBP6.58□□□□□ -1.36
SPG11-209ENST00000558253 YLPM1P49750 1951 aaKnown RBP6.58□□□□□ -1.36
SPG11-209ENST00000558253 ZGRF1Q86YA3 2104 aa6.58□□□□□ -1.36
SPG11-209ENST00000558253 TRBV19A0A075B6N1 114 aa6.57□□□□□ -1.36
SPG11-209ENST00000558253 IGHV2-70DA0A0C4DH43 119 aa6.57□□□□□ -1.36
SPG11-209ENST00000558253 C19orf71A6NCJ1 209 aa6.57□□□□□ -1.36
SPG11-209ENST00000558253 K7EP13 123 aa6.57□□□□□ -1.36
SPG11-209ENST00000558253 GNG7O60262 68 aa6.57□□□□□ -1.36
SPG11-209ENST00000558253 NDUFB8O95169 186 aa6.57□□□□□ -1.36
SPG11-209ENST00000558253 SCGB1D1O95968 90 aa6.57□□□□□ -1.36
SPG11-209ENST00000558253 HLA-DRB1P01911 266 aa6.57□□□□□ -1.36
SPG11-209ENST00000558253 CDKN1BP46527 198 aa6.57□□□□□ -1.36
SPG11-209ENST00000558253 FOXA3P55318 350 aaPredicted RBP6.57□□□□□ -1.36
SPG11-209ENST00000558253 PET117Q6UWS5 81 aa6.57□□□□□ -1.36
SPG11-209ENST00000558253 TOMM20LQ6UXN7 152 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms