RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 CARHSP1Q9Y2V2 147 aaKnown RBP15.83■□□□□ 0.12
SNRPA1-205ENST00000558036 PUS1Q9Y606 427 aaKnown RBP eCLIP15.83■□□□□ 0.12
SNRPA1-205ENST00000558036 HIVEP1P15822 2718 aa15.82■□□□□ 0.12
SNRPA1-205ENST00000558036 C11orf94C9JXX5 98 aa15.82■□□□□ 0.12
SNRPA1-205ENST00000558036 PPP5D1E7EU14 171 aa15.82■□□□□ 0.12
SNRPA1-205ENST00000558036 PQLC2Q6ZP29 291 aa15.82■□□□□ 0.12
SNRPA1-205ENST00000558036 ZNF414Q96IQ9 312 aa15.82■□□□□ 0.12
SNRPA1-205ENST00000558036 MRPL27Q9P0M9 148 aaKnown RBP15.82■□□□□ 0.12
SNRPA1-205ENST00000558036 TRBV7-1A0A0A6YYK4 115 aa15.82■□□□□ 0.12
SNRPA1-205ENST00000558036 WI2-2373I1.2A0A1W2PRP0 233 aa15.82■□□□□ 0.12
SNRPA1-205ENST00000558036 SOHLH1Q5JUK2 328 aa15.82■□□□□ 0.12
SNRPA1-205ENST00000558036 SLC25A39Q9BZJ4 359 aaPredicted RBP15.82■□□□□ 0.12
SNRPA1-205ENST00000558036 TRBV12-3P01733 135 aa15.81■□□□□ 0.12
SNRPA1-205ENST00000558036 UBE2L3P68036 154 aaKnown RBP15.81■□□□□ 0.12
SNRPA1-205ENST00000558036 CCDC28AQ8IWP9 274 aa15.81■□□□□ 0.12
SNRPA1-205ENST00000558036 FAM181BA6NEQ2 426 aa15.8■□□□□ 0.12
SNRPA1-205ENST00000558036 OR2C1O95371 312 aa15.8■□□□□ 0.12
SNRPA1-205ENST00000558036 RAB9AP51151 201 aa15.8■□□□□ 0.12
SNRPA1-205ENST00000558036 PAXXQ9BUH6 204 aa15.8■□□□□ 0.12
SNRPA1-205ENST00000558036 HIVEP2P31629 2446 aa15.8■□□□□ 0.12
SNRPA1-205ENST00000558036 H3BUA1 57 aa15.8■□□□□ 0.12
SNRPA1-205ENST00000558036 TGOLN2O43493 480 aa15.8■□□□□ 0.12
SNRPA1-205ENST00000558036 OR51M1Q9H341 326 aa15.8■□□□□ 0.12
SNRPA1-205ENST00000558036 FAM74A7A6NL05 159 aa15.79■□□□□ 0.12
SNRPA1-205ENST00000558036 ZNF580Q9UK33 172 aa15.79■□□□□ 0.12
SNRPA1-205ENST00000558036 SETXQ7Z333 2677 aaKnown RBP15.79■□□□□ 0.12
SNRPA1-205ENST00000558036 SCGB2A1O75556 95 aa15.79■□□□□ 0.12
SNRPA1-205ENST00000558036 IGHG4P01861 327 aa15.79■□□□□ 0.12
SNRPA1-205ENST00000558036 FAM90A2PQ658T7 463 aa15.79■□□□□ 0.12
SNRPA1-205ENST00000558036 TMEM86BQ8N661 226 aa15.79■□□□□ 0.12
SNRPA1-205ENST00000558036 OR5B12Q96R08 314 aa15.79■□□□□ 0.12
SNRPA1-205ENST00000558036 TMEM167BQ9NRX6 74 aa15.79■□□□□ 0.12
SNRPA1-205ENST00000558036 H3BTX0 84 aa15.78■□□□□ 0.12
SNRPA1-205ENST00000558036 BRI3O95415 125 aa15.78■□□□□ 0.12
SNRPA1-205ENST00000558036 PSMB8P28062 276 aa15.78■□□□□ 0.12
SNRPA1-205ENST00000558036 SVBPQ8N300 66 aa15.78■□□□□ 0.12
SNRPA1-205ENST00000558036 FXYD5Q96DB9 178 aa15.78■□□□□ 0.12
SNRPA1-205ENST00000558036 SRD5A1P18405 259 aa15.77■□□□□ 0.12
SNRPA1-205ENST00000558036 TOMM20LQ6UXN7 152 aa15.77■□□□□ 0.12
SNRPA1-205ENST00000558036 ZNF600Q6ZNG1 722 aa15.77■□□□□ 0.12
SNRPA1-205ENST00000558036 USMG5Q96IX5 58 aa15.77■□□□□ 0.12
SNRPA1-205ENST00000558036 C20orf24Q9BUV8 137 aa15.77■□□□□ 0.12
SNRPA1-205ENST00000558036 NPPCP23582 126 aa15.77■□□□□ 0.11
SNRPA1-205ENST00000558036 TAGLN2P37802 199 aaKnown RBP15.77■□□□□ 0.11
SNRPA1-205ENST00000558036 BLNKQ8WV28 456 aa15.77■□□□□ 0.11
SNRPA1-205ENST00000558036 RPUSD4Q96CM3 377 aaKnown RBP15.77■□□□□ 0.11
SNRPA1-205ENST00000558036 SHANK2-AS3Q9BTD1 123 aa15.77■□□□□ 0.11
SNRPA1-205ENST00000558036 GAR1Q9NY12 217 aaKnown RBP15.77■□□□□ 0.11
SNRPA1-205ENST00000558036 H3BRN7 92 aa15.76■□□□□ 0.11
SNRPA1-205ENST00000558036 GP9P14770 177 aa15.76■□□□□ 0.11
SNRPA1-205ENST00000558036 ZNF674Q2M3X9 581 aa15.76■□□□□ 0.11
SNRPA1-205ENST00000558036 ARL3P36405 182 aa15.76■□□□□ 0.11
SNRPA1-205ENST00000558036 OR4X2Q8NGF9 303 aa15.76■□□□□ 0.11
SNRPA1-205ENST00000558036 SUN5Q8TC36 379 aa15.76■□□□□ 0.11
SNRPA1-205ENST00000558036 ZFAND3Q9H8U3 227 aa15.76■□□□□ 0.11
SNRPA1-205ENST00000558036 SERTAD4Q9NUC0 356 aa15.76■□□□□ 0.11
SNRPA1-205ENST00000558036 TMEM160Q9NX00 188 aa15.76■□□□□ 0.11
SNRPA1-205ENST00000558036 GGTLC3B5MD39 225 aa15.75■□□□□ 0.11
SNRPA1-205ENST00000558036 RPLP1P05386 114 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-205ENST00000558036 Q8N2B8 174 aa15.75■□□□□ 0.11
SNRPA1-205ENST00000558036 SCO2A0A1W2PP80 73 aa15.74■□□□□ 0.11
SNRPA1-205ENST00000558036 ZNF98A6NK75 572 aa15.74■□□□□ 0.11
SNRPA1-205ENST00000558036 DERL1Q9BUN8 251 aa15.74■□□□□ 0.11
SNRPA1-205ENST00000558036 A0A0G2JLM5 398 aa15.74■□□□□ 0.11
SNRPA1-205ENST00000558036 H3BQ15 152 aa15.74■□□□□ 0.11
SNRPA1-205ENST00000558036 ZNF207O43670 478 aaKnown RBP15.74■□□□□ 0.11
SNRPA1-205ENST00000558036 CD99P14209 185 aa15.74■□□□□ 0.11
SNRPA1-205ENST00000558036 STXBP6Q8NFX7 210 aa15.74■□□□□ 0.11
SNRPA1-205ENST00000558036 BAHCC1Q9P281 2608 aa15.74■□□□□ 0.11
SNRPA1-205ENST00000558036 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 TMEM250H0YL14 139 aa15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 PDE6DO43924 150 aa15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 NDUFB4O95168 129 aa15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 TEX38Q6PEX7 206 aa15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 Q6ZSV7 163 aa15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 NKX6-2Q9C056 277 aaPredicted RBP15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 PARLQ9H300 379 aa15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 RABAC1Q9UI14 185 aa15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 CDC42EP3Q9UKI2 254 aa15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 INAFM1C9JVW0 142 aa15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 M0R036 132 aa15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 BMPR1BO00238 502 aa15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 NBEAP1P0C6P0 100 aa15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 AKR1C3P42330 323 aa15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 RPL15P61313 204 aaKnown RBP15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 RANP62826 216 aaKnown RBP15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 SUMO1P63165 101 aaKnown RBP15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 SLC35B1P78383 322 aa15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 ZNF343Q6P1L6 599 aa15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 CLRN3Q8NCR9 226 aa15.73■□□□□ 0.11
SNRPA1-205ENST00000558036 NSD1Q96L73 2696 aaPredicted RBP15.72■□□□□ 0.11
SNRPA1-205ENST00000558036 IGHV3OR16-13A0A075B7E8 117 aa15.72■□□□□ 0.11
SNRPA1-205ENST00000558036 IGHV3-74A0A0B4J1X5 117 aa15.72■□□□□ 0.11
SNRPA1-205ENST00000558036 SNAPINO95295 136 aa15.72■□□□□ 0.11
SNRPA1-205ENST00000558036 RELQ04864 619 aaPredicted RBP15.72■□□□□ 0.11
SNRPA1-205ENST00000558036 SMIM7Q9BQ49 75 aa15.72■□□□□ 0.11
SNRPA1-205ENST00000558036 IGHV3-66A0A0C4DH42 116 aa15.71■□□□□ 0.11
SNRPA1-205ENST00000558036 CLPSL1A2RUU4 121 aa15.71■□□□□ 0.11
SNRPA1-205ENST00000558036 ZNF727A8MUV8 499 aa15.71■□□□□ 0.11
SNRPA1-205ENST00000558036 AWAT1Q58HT5 328 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms