RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 ZNF25P17030 456 aaPredicted RBP10.27□□□□□ -0.77
LDLR-207ENST00000558013 MC5RP33032 325 aa10.27□□□□□ -0.77
LDLR-207ENST00000558013 FBLN7Q53RD9 439 aa10.27□□□□□ -0.77
LDLR-207ENST00000558013 GTSF1Q8WW33 167 aa10.27□□□□□ -0.77
LDLR-207ENST00000558013 IGLV1-47P01700 117 aa10.27□□□□□ -0.77
LDLR-207ENST00000558013 PSG1P11464 419 aa10.27□□□□□ -0.77
LDLR-207ENST00000558013 LYZP61626 148 aa10.27□□□□□ -0.77
LDLR-207ENST00000558013 GRAMD2BQ96HH9 432 aa10.27□□□□□ -0.77
LDLR-207ENST00000558013 C17orf77Q96MU5 243 aa10.27□□□□□ -0.77
LDLR-207ENST00000558013 CLEC7AQ9BXN2 247 aa10.27□□□□□ -0.77
LDLR-207ENST00000558013 NCOR2Q9Y618 2525 aa10.26□□□□□ -0.77
LDLR-207ENST00000558013 A0A1W2PRD5 423 aa10.26□□□□□ -0.77
LDLR-207ENST00000558013 A0A1W2PRF3 423 aa10.26□□□□□ -0.77
LDLR-207ENST00000558013 A0A1W2PRM7 423 aa10.26□□□□□ -0.77
LDLR-207ENST00000558013 TEX22C9J3V5 150 aa10.26□□□□□ -0.77
LDLR-207ENST00000558013 HYPMO75409 117 aa10.26□□□□□ -0.77
LDLR-207ENST00000558013 GP9P14770 177 aa10.26□□□□□ -0.77
LDLR-207ENST00000558013 LGALS7P47929 136 aa10.26□□□□□ -0.77
LDLR-207ENST00000558013 SPATA45Q537H7 98 aa10.26□□□□□ -0.77
LDLR-207ENST00000558013 PERPQ96FX8 193 aa10.26□□□□□ -0.77
LDLR-207ENST00000558013 TP73-AS1Q9UF72 201 aa10.26□□□□□ -0.77
LDLR-207ENST00000558013 MMDQ15546 238 aa10.26□□□□□ -0.77
LDLR-207ENST00000558013 KLF17Q5JT82 389 aaPredicted RBP10.26□□□□□ -0.77
LDLR-207ENST00000558013 PPP1R27Q86WC6 154 aa10.26□□□□□ -0.77
LDLR-207ENST00000558013 BCL6BQ8N143 479 aaPredicted RBP10.26□□□□□ -0.77
LDLR-207ENST00000558013 TMEM116Q8NCL8 245 aa10.26□□□□□ -0.77
LDLR-207ENST00000558013 PGLYRP4Q96LB8 373 aa10.26□□□□□ -0.77
LDLR-207ENST00000558013 Q9H3A6 140 aa10.26□□□□□ -0.77
LDLR-207ENST00000558013 KAAG1Q9UBP8 84 aa10.26□□□□□ -0.77
LDLR-207ENST00000558013 BUB1B-PAK6H3BSN5 160 aa10.25□□□□□ -0.77
LDLR-207ENST00000558013 CRYGBP07316 175 aa10.25□□□□□ -0.77
LDLR-207ENST00000558013 RPL19P84098 196 aaKnown RBP10.25□□□□□ -0.77
LDLR-207ENST00000558013 RNASEKQ6P5S7 137 aaKnown RBP10.25□□□□□ -0.77
LDLR-207ENST00000558013 CIARTQ8N365 385 aaPredicted RBP10.25□□□□□ -0.77
LDLR-207ENST00000558013 SIAH2O43255 324 aa10.25□□□□□ -0.77
LDLR-207ENST00000558013 RBP4P02753 201 aa10.25□□□□□ -0.77
LDLR-207ENST00000558013 CTRLP40313 264 aa10.25□□□□□ -0.77
LDLR-207ENST00000558013 EBLN2Q6P2I7 272 aa10.25□□□□□ -0.77
LDLR-207ENST00000558013 FAM231DQ6ZW35 169 aa10.25□□□□□ -0.77
LDLR-207ENST00000558013 SPATA12Q7Z6I5 190 aa10.25□□□□□ -0.77
LDLR-207ENST00000558013 ALKBH7Q9BT30 221 aaPredicted RBP10.25□□□□□ -0.77
LDLR-207ENST00000558013 MLST8Q9BVC4 326 aa10.25□□□□□ -0.77
LDLR-207ENST00000558013 FAM71F2Q6NXP2 309 aa10.24□□□□□ -0.77
LDLR-207ENST00000558013 C8orf31Q8N9H6 132 aa10.24□□□□□ -0.77
LDLR-207ENST00000558013 URB1-AS1Q96HZ7 61 aa10.24□□□□□ -0.77
LDLR-207ENST00000558013 GPR82Q96P67 336 aa10.24□□□□□ -0.77
LDLR-207ENST00000558013 CLEC5AQ9NY25 188 aa10.24□□□□□ -0.77
LDLR-207ENST00000558013 PRRX1P54821 245 aa10.24□□□□□ -0.77
LDLR-207ENST00000558013 CDSNQ15517 529 aa10.24□□□□□ -0.77
LDLR-207ENST00000558013 ASCL5Q7RTU5 278 aa10.24□□□□□ -0.77
LDLR-207ENST00000558013 TEX45Q8NA69 505 aa10.24□□□□□ -0.77
LDLR-207ENST00000558013 SRSF12Q8WXF0 261 aaKnown RBP10.24□□□□□ -0.77
LDLR-207ENST00000558013 TRGV9Q99603 122 aa10.24□□□□□ -0.77
LDLR-207ENST00000558013 HILPDAQ9Y5L2 63 aa10.24□□□□□ -0.77
LDLR-207ENST00000558013 FAM90A27PA6NNH2 459 aa10.24□□□□□ -0.77
LDLR-207ENST00000558013 TCRAP04437 139 aa10.24□□□□□ -0.77
LDLR-207ENST00000558013 ZNF138P52744 262 aa10.24□□□□□ -0.77
LDLR-207ENST00000558013 PLGLAQ15195 96 aa10.24□□□□□ -0.77
LDLR-207ENST00000558013 ZNF124Q15973 351 aa10.24□□□□□ -0.77
LDLR-207ENST00000558013 Q56UQ5 140 aa10.24□□□□□ -0.77
LDLR-207ENST00000558013 PPIAL4CA0A0B4J2A2 164 aa10.23□□□□□ -0.77
LDLR-207ENST00000558013 HSBP1O75506 76 aa10.23□□□□□ -0.77
LDLR-207ENST00000558013 IGLC1P0CG04 106 aa10.23□□□□□ -0.77
LDLR-207ENST00000558013 PPIAL4GP0DN37 164 aa10.23□□□□□ -0.77
LDLR-207ENST00000558013 HIST1H1EP10412 219 aaKnown RBP10.23□□□□□ -0.77
LDLR-207ENST00000558013 APOBEC3AP31941 199 aaPredicted RBP10.23□□□□□ -0.77
LDLR-207ENST00000558013 LINC00173Q6ZV60 143 aa10.23□□□□□ -0.77
LDLR-207ENST00000558013 KLF12Q9Y4X4 402 aa10.23□□□□□ -0.77
LDLR-207ENST00000558013 F11RQ9Y624 299 aaKnown RBP10.23□□□□□ -0.77
LDLR-207ENST00000558013 GOLT1AQ6ZVE7 132 aa10.23□□□□□ -0.77
LDLR-207ENST00000558013 C8orf46Q8TAG6 207 aa10.23□□□□□ -0.77
LDLR-207ENST00000558013 RPEQ96AT9 228 aa10.23□□□□□ -0.77
LDLR-207ENST00000558013 ONECUT1Q9UBC0 465 aa10.23□□□□□ -0.77
LDLR-207ENST00000558013 VSTM5A8MXK1 200 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 M0R2Z0 102 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 FOXC1Q12948 553 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 SSX8Q7RTT4 187 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 WIPF2Q8TF74 440 aaPredicted RBP10.22□□□□□ -0.77
LDLR-207ENST00000558013 BORCS7Q96B45 105 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 TMEM208Q9BTX3 173 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 MCRIP2Q9BUT9 160 aaKnown RBP10.22□□□□□ -0.77
LDLR-207ENST00000558013 A0A1B0GXF2 115 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 ZNF785A8K8V0 405 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 TIMM23O14925 209 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 IGKV1-17P01599 117 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 NPSP0C0P6 89 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 KLRD1Q13241 179 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 ETFRF1Q6IPR1 90 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 PRNTQ86SH4 94 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 SLC25A39Q9BZJ4 359 aaPredicted RBP10.22□□□□□ -0.77
LDLR-207ENST00000558013 RPP21Q9H633 154 aaKnown RBP10.22□□□□□ -0.77
LDLR-207ENST00000558013 FAM181BA6NEQ2 426 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 CNIH1O95406 144 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 LTAP01374 205 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 ARF6P62330 175 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 COX19Q49B96 90 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 PVRIGQ6DKI7 326 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 Q6ZVH6 145 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 MUC15Q8N387 334 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 C5orf17Q8NAS9 161 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms