RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 SFT2D2O95562 160 aa10.53□□□□□ -0.72
SHMT2-235ENST00000557740 CFDP00746 253 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-235ENST00000557740 AMBPP02760 352 aa10.53□□□□□ -0.72
SHMT2-235ENST00000557740 FXYD7P58549 80 aa10.53□□□□□ -0.72
SHMT2-235ENST00000557740 DEFB1P60022 68 aa10.53□□□□□ -0.72
SHMT2-235ENST00000557740 C12orf74Q32Q52 190 aa10.53□□□□□ -0.72
SHMT2-235ENST00000557740 SPATA31B1PQ5VZV4 182 aa10.53□□□□□ -0.72
SHMT2-235ENST00000557740 GGNBP1Q5YKI7 109 aa10.53□□□□□ -0.72
SHMT2-235ENST00000557740 EBLN2Q6P2I7 272 aa10.53□□□□□ -0.72
SHMT2-235ENST00000557740 ZNF705AQ6ZN79 300 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-235ENST00000557740 THAP8Q8NA92 274 aa10.53□□□□□ -0.72
SHMT2-235ENST00000557740 OR4B1Q8NGF8 309 aa10.53□□□□□ -0.72
SHMT2-235ENST00000557740 NEU1Q99519 415 aa10.53□□□□□ -0.72
SHMT2-235ENST00000557740 MAGT1Q9H0U3 335 aa10.53□□□□□ -0.72
SHMT2-235ENST00000557740 TMEM189A5PLL7 270 aa10.52□□□□□ -0.73
SHMT2-235ENST00000557740 WRBO00258 174 aa10.52□□□□□ -0.73
SHMT2-235ENST00000557740 SOCS3O14543 225 aa10.52□□□□□ -0.73
SHMT2-235ENST00000557740 HOXB5P09067 269 aa10.52□□□□□ -0.73
SHMT2-235ENST00000557740 GALR1P47211 349 aa10.52□□□□□ -0.73
SHMT2-235ENST00000557740 MEOX2P50222 304 aa10.52□□□□□ -0.73
SHMT2-235ENST00000557740 EMP1P54849 157 aa10.52□□□□□ -0.73
SHMT2-235ENST00000557740 AKR1C1Q04828 323 aa10.52□□□□□ -0.73
SHMT2-235ENST00000557740 ZNF79Q15937 498 aa10.52□□□□□ -0.73
SHMT2-235ENST00000557740 SLC25A22Q9H936 323 aa10.52□□□□□ -0.73
SHMT2-235ENST00000557740 FRAS1Q86XX4 4008 aa10.51□□□□□ -0.73
SHMT2-235ENST00000557740 IGKV1OR2-108A0A075B7D4 117 aa10.51□□□□□ -0.73
SHMT2-235ENST00000557740 TEX48A0A1B0GUV7 120 aa10.51□□□□□ -0.73
SHMT2-235ENST00000557740 SMIM9A6NGZ8 99 aa10.51□□□□□ -0.73
SHMT2-235ENST00000557740 ZNF705FA8MVS1 300 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-235ENST00000557740 ZNF705DP0CH99 300 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-235ENST00000557740 ZNF705BP0CI00 300 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-235ENST00000557740 SPART-AS1P0CW21 52 aa10.51□□□□□ -0.73
SHMT2-235ENST00000557740 SPANXN5Q5MJ07 72 aa10.51□□□□□ -0.73
SHMT2-235ENST00000557740 BPIFCQ8NFQ6 507 aa10.51□□□□□ -0.73
SHMT2-235ENST00000557740 C16orf92Q96LL3 132 aa10.51□□□□□ -0.73
SHMT2-235ENST00000557740 CLUHP3Q96NS8 147 aa10.51□□□□□ -0.73
SHMT2-235ENST00000557740 NDUFAF3Q9BU61 184 aa10.51□□□□□ -0.73
SHMT2-235ENST00000557740 RPRMQ9NS64 109 aa10.51□□□□□ -0.73
SHMT2-235ENST00000557740 SLC45A2Q9UMX9 530 aa10.51□□□□□ -0.73
SHMT2-235ENST00000557740 RFNGQ9Y644 331 aa10.51□□□□□ -0.73
SHMT2-235ENST00000557740 H3BP45 60 aa10.5□□□□□ -0.73
SHMT2-235ENST00000557740 S100A7P31151 101 aa10.5□□□□□ -0.73
SHMT2-235ENST00000557740 INPP1P49441 399 aa10.5□□□□□ -0.73
SHMT2-235ENST00000557740 PAX9P55771 341 aa10.5□□□□□ -0.73
SHMT2-235ENST00000557740 UBE2MP61081 183 aaKnown RBP10.5□□□□□ -0.73
SHMT2-235ENST00000557740 PSG9Q00887 426 aa10.5□□□□□ -0.73
SHMT2-235ENST00000557740 SPANXN2Q5MJ10 180 aa10.5□□□□□ -0.73
SHMT2-235ENST00000557740 FAM78BQ5VT40 261 aa10.5□□□□□ -0.73
SHMT2-235ENST00000557740 CCDC190Q86UF4 302 aa10.5□□□□□ -0.73
SHMT2-235ENST00000557740 ZNF709Q8N972 641 aa10.5□□□□□ -0.73
SHMT2-235ENST00000557740 C7orf50Q9BRJ6 194 aaKnown RBP10.5□□□□□ -0.73
SHMT2-235ENST00000557740 TMEM147Q9BVK8 224 aa10.5□□□□□ -0.73
SHMT2-235ENST00000557740 SLC25A32Q9H2D1 315 aa10.5□□□□□ -0.73
SHMT2-235ENST00000557740 GOLT1BQ9Y3E0 138 aa10.5□□□□□ -0.73
SHMT2-235ENST00000557740 STRAPQ9Y3F4 350 aaKnown RBP10.5□□□□□ -0.73
SHMT2-235ENST00000557740 A0A0J9YX75 114 aa10.49□□□□□ -0.73
SHMT2-235ENST00000557740 SMCO3A2RU48 225 aa10.49□□□□□ -0.73
SHMT2-235ENST00000557740 PRSS46E5RG02 174 aa10.49□□□□□ -0.73
SHMT2-235ENST00000557740 F6UB75 175 aa10.49□□□□□ -0.73
SHMT2-235ENST00000557740 P0DMU3 169 aa10.49□□□□□ -0.73
SHMT2-235ENST00000557740 FAM231AP0DMU4 169 aa10.49□□□□□ -0.73
SHMT2-235ENST00000557740 FAM231CP0DMU5 169 aa10.49□□□□□ -0.73
SHMT2-235ENST00000557740 ORM2P19652 201 aa10.49□□□□□ -0.73
SHMT2-235ENST00000557740 GSG1LQ6UXU4 331 aa10.49□□□□□ -0.73
SHMT2-235ENST00000557740 ACOT7LQ6ZUV0 252 aa10.49□□□□□ -0.73
SHMT2-235ENST00000557740 OR1B1Q8NGR6 318 aa10.49□□□□□ -0.73
SHMT2-235ENST00000557740 GPR82Q96P67 336 aa10.49□□□□□ -0.73
SHMT2-235ENST00000557740 RSG1Q9BU20 258 aa10.49□□□□□ -0.73
SHMT2-235ENST00000557740 SLC35B3Q9H1N7 401 aa10.49□□□□□ -0.73
SHMT2-235ENST00000557740 ZNF98A6NK75 572 aa10.48□□□□□ -0.73
SHMT2-235ENST00000557740 HBE1P02100 147 aa10.48□□□□□ -0.73
SHMT2-235ENST00000557740 TRIQKQ629K1 86 aa10.48□□□□□ -0.73
SHMT2-235ENST00000557740 DOK5Q9P104 306 aa10.48□□□□□ -0.73
SHMT2-235ENST00000557740 LOC102723971A0A1B0GUV8 181 aa10.47□□□□□ -0.73
SHMT2-235ENST00000557740 C9orf170A2RU37 121 aa10.47□□□□□ -0.73
SHMT2-235ENST00000557740 ADAP1O75689 374 aa10.47□□□□□ -0.73
SHMT2-235ENST00000557740 GATA2P23769 480 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-235ENST00000557740 POM121L12Q8N7R1 296 aa10.47□□□□□ -0.73
SHMT2-235ENST00000557740 OR4D5Q8NGN0 318 aa10.47□□□□□ -0.73
SHMT2-235ENST00000557740 C20orf173Q96LM9 149 aa10.47□□□□□ -0.73
SHMT2-235ENST00000557740 SCRT1Q9BWW7 348 aa10.47□□□□□ -0.73
SHMT2-235ENST00000557740 SRRQ9GZT4 340 aa10.47□□□□□ -0.73
SHMT2-235ENST00000557740 NAP1L6A6NFF2 107 aa10.46□□□□□ -0.73
SHMT2-235ENST00000557740 SSSCA1O60232 199 aa10.46□□□□□ -0.73
SHMT2-235ENST00000557740 NDUFB6O95139 128 aa10.46□□□□□ -0.73
SHMT2-235ENST00000557740 IFNA21P01568 189 aa10.46□□□□□ -0.73
SHMT2-235ENST00000557740 POLR2GP62487 172 aaKnown RBP eCLIP10.46□□□□□ -0.73
SHMT2-235ENST00000557740 RRN3P1Q2M238 152 aa10.46□□□□□ -0.73
SHMT2-235ENST00000557740 FAM222AQ5U5X8 452 aa10.46□□□□□ -0.73
SHMT2-235ENST00000557740 TMEM144Q7Z5S9 345 aa10.46□□□□□ -0.73
SHMT2-235ENST00000557740 NIPSNAP3BQ9BS92 247 aa10.46□□□□□ -0.73
SHMT2-235ENST00000557740 TMEM208Q9BTX3 173 aa10.46□□□□□ -0.73
SHMT2-235ENST00000557740 PSENENQ9NZ42 101 aa10.46□□□□□ -0.73
SHMT2-235ENST00000557740 DKK2Q9UBU2 259 aa10.46□□□□□ -0.73
SHMT2-235ENST00000557740 H3BRN7 92 aa10.45□□□□□ -0.74
SHMT2-235ENST00000557740 IL5P05113 134 aa10.45□□□□□ -0.74
SHMT2-235ENST00000557740 RAP2BP61225 183 aa10.45□□□□□ -0.74
SHMT2-235ENST00000557740 FGL1Q08830 312 aa10.45□□□□□ -0.74
SHMT2-235ENST00000557740 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.45□□□□□ -0.74
SHMT2-235ENST00000557740 TMEM182Q6ZP80 229 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms