RNA–Protein interactions for RNA: ENST00000557307.1

SYNE2-227, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 526 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-227ENST00000557307 IGFL4Q6B9Z1 124 aa7.82□□□□□ -1.16
SYNE2-227ENST00000557307 OR8G2PQ6IF36 304 aa7.82□□□□□ -1.16
SYNE2-227ENST00000557307 LINC00052Q96N35 136 aa7.82□□□□□ -1.16
SYNE2-227ENST00000557307 TRGV9Q99603 122 aa7.82□□□□□ -1.16
SYNE2-227ENST00000557307 SAV1Q9H4B6 383 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-227ENST00000557307 PLA2G2EQ9NZK7 142 aa7.82□□□□□ -1.16
SYNE2-227ENST00000557307 DNAH11Q96DT5 4516 aa7.82□□□□□ -1.16
SYNE2-227ENST00000557307 NACAE9PAV3 2078 aa7.82□□□□□ -1.16
SYNE2-227ENST00000557307 TRAV10A0A0B4J240 114 aa7.81□□□□□ -1.16
SYNE2-227ENST00000557307 CCDC160A6NGH7 325 aa7.81□□□□□ -1.16
SYNE2-227ENST00000557307 PRM2P04554 102 aa7.81□□□□□ -1.16
SYNE2-227ENST00000557307 NKX2-1P43699 371 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-227ENST00000557307 AP2S1P53680 142 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-227ENST00000557307 SNRPD3P62318 126 aaKnown RBP7.81□□□□□ -1.16
SYNE2-227ENST00000557307 TMEM41BQ5BJD5 291 aa7.81□□□□□ -1.16
SYNE2-227ENST00000557307 ZNF705AQ6ZN79 300 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-227ENST00000557307 ACOT7LQ6ZUV0 252 aa7.81□□□□□ -1.16
SYNE2-227ENST00000557307 NOXA1Q86UR1 476 aa7.81□□□□□ -1.16
SYNE2-227ENST00000557307 CENPSQ8N2Z9 138 aa7.81□□□□□ -1.16
SYNE2-227ENST00000557307 IGHV3OR16-12A0A075B7B8 117 aa7.8□□□□□ -1.16
SYNE2-227ENST00000557307 TRAV8-2A0A0B4J237 113 aa7.8□□□□□ -1.16
SYNE2-227ENST00000557307 LINC00854A0A1B0GVQ3 168 aa7.8□□□□□ -1.16
SYNE2-227ENST00000557307 C9orf170A2RU37 121 aa7.8□□□□□ -1.16
SYNE2-227ENST00000557307 PMS2P5A8MQ11 134 aa7.8□□□□□ -1.16
SYNE2-227ENST00000557307 ZNF705FA8MVS1 300 aaPredicted RBP7.8□□□□□ -1.16
SYNE2-227ENST00000557307 C11orf94C9JXX5 98 aa7.8□□□□□ -1.16
SYNE2-227ENST00000557307 SYNGR2O43760 224 aa7.8□□□□□ -1.16
SYNE2-227ENST00000557307 ZNF705DP0CH99 300 aaPredicted RBP7.8□□□□□ -1.16
SYNE2-227ENST00000557307 ZNF705BP0CI00 300 aaPredicted RBP7.8□□□□□ -1.16
SYNE2-227ENST00000557307 FAUP35544 74 aaKnown RBP7.8□□□□□ -1.16
SYNE2-227ENST00000557307 EMP1P54849 157 aa7.8□□□□□ -1.16
SYNE2-227ENST00000557307 UBE2MP61081 183 aaKnown RBP7.8□□□□□ -1.16
SYNE2-227ENST00000557307 POLR2GP62487 172 aaKnown RBP eCLIP7.8□□□□□ -1.16
SYNE2-227ENST00000557307 SPANXN5Q5MJ07 72 aa7.8□□□□□ -1.16
SYNE2-227ENST00000557307 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.8□□□□□ -1.16
SYNE2-227ENST00000557307 C1orf158Q8N1D5 194 aa7.8□□□□□ -1.16
SYNE2-227ENST00000557307 OR4B1Q8NGF8 309 aa7.8□□□□□ -1.16
SYNE2-227ENST00000557307 SLC25A22Q9H936 323 aa7.8□□□□□ -1.16
SYNE2-227ENST00000557307 SEPSECSQ9HD40 501 aaKnown RBP7.8□□□□□ -1.16
SYNE2-227ENST00000557307 DOK5Q9P104 306 aa7.8□□□□□ -1.16
SYNE2-227ENST00000557307 DEFB131BA0A096LNP1 70 aa7.79□□□□□ -1.16
SYNE2-227ENST00000557307 A0A0J9YX75 114 aa7.79□□□□□ -1.16
SYNE2-227ENST00000557307 SLC25A6P12236 298 aa7.79□□□□□ -1.16
SYNE2-227ENST00000557307 ANXA7P20073 488 aaKnown RBP7.79□□□□□ -1.16
SYNE2-227ENST00000557307 PSMB3P49720 205 aa7.79□□□□□ -1.16
SYNE2-227ENST00000557307 PAX9P55771 341 aa7.79□□□□□ -1.16
SYNE2-227ENST00000557307 FAM78BQ5VT40 261 aa7.79□□□□□ -1.16
SYNE2-227ENST00000557307 AMTNQ6UX39 209 aa7.79□□□□□ -1.16
SYNE2-227ENST00000557307 FOXI2Q6ZQN5 318 aa7.79□□□□□ -1.16
SYNE2-227ENST00000557307 RNF182Q8N6D2 247 aa7.79□□□□□ -1.16
SYNE2-227ENST00000557307 OR4D5Q8NGN0 318 aa7.79□□□□□ -1.16
SYNE2-227ENST00000557307 PPP1R14BQ96C90 147 aa7.79□□□□□ -1.16
SYNE2-227ENST00000557307 SLC25A21Q9BQT8 299 aaPredicted RBP7.79□□□□□ -1.16
SYNE2-227ENST00000557307 TMED3Q9Y3Q3 217 aa7.79□□□□□ -1.16
SYNE2-227ENST00000557307 PCLOQ9Y6V0 5065 aa7.79□□□□□ -1.16
SYNE2-227ENST00000557307 ZNF98A6NK75 572 aa7.78□□□□□ -1.16
SYNE2-227ENST00000557307 SNRPGP15A8MWD9 76 aa7.78□□□□□ -1.16
SYNE2-227ENST00000557307 NDUFB6O95139 128 aa7.78□□□□□ -1.16
SYNE2-227ENST00000557307 AMBPP02760 352 aa7.78□□□□□ -1.16
SYNE2-227ENST00000557307 ORM2P19652 201 aa7.78□□□□□ -1.16
SYNE2-227ENST00000557307 S100A5P33763 92 aa7.78□□□□□ -1.16
SYNE2-227ENST00000557307 AP3S2P59780 193 aa7.78□□□□□ -1.16
SYNE2-227ENST00000557307 RAB11AP62491 216 aa7.78□□□□□ -1.16
SYNE2-227ENST00000557307 ID3Q02535 119 aa7.78□□□□□ -1.16
SYNE2-227ENST00000557307 OR8I2Q8N0Y5 310 aa7.78□□□□□ -1.16
SYNE2-227ENST00000557307 COQ8AQ8NI60 647 aa7.78□□□□□ -1.16
SYNE2-227ENST00000557307 CACFD1Q9UGQ2 172 aa7.78□□□□□ -1.16
SYNE2-227ENST00000557307 A8MTW9 85 aa7.77□□□□□ -1.17
SYNE2-227ENST00000557307 H3BRN7 92 aa7.77□□□□□ -1.17
SYNE2-227ENST00000557307 SSSCA1O60232 199 aa7.77□□□□□ -1.17
SYNE2-227ENST00000557307 ATP5IP56385 69 aaPredicted RBP7.77□□□□□ -1.17
SYNE2-227ENST00000557307 TCTAP57738 103 aa7.77□□□□□ -1.17
SYNE2-227ENST00000557307 RRAS2P62070 204 aaPredicted RBP7.77□□□□□ -1.17
SYNE2-227ENST00000557307 AKR1C1Q04828 323 aa7.77□□□□□ -1.17
SYNE2-227ENST00000557307 ARL16Q0P5N6 197 aa7.77□□□□□ -1.17
SYNE2-227ENST00000557307 C1orf194Q5T5A4 169 aa7.77□□□□□ -1.17
SYNE2-227ENST00000557307 FAM222AQ5U5X8 452 aa7.77□□□□□ -1.17
SYNE2-227ENST00000557307 OR1B1Q8NGR6 318 aa7.77□□□□□ -1.17
SYNE2-227ENST00000557307 UHRF2Q96PU4 802 aa7.77□□□□□ -1.17
SYNE2-227ENST00000557307 NEU1Q99519 415 aa7.77□□□□□ -1.17
SYNE2-227ENST00000557307 RSG1Q9BU20 258 aa7.77□□□□□ -1.17
SYNE2-227ENST00000557307 RNF126Q9BV68 326 aa7.77□□□□□ -1.17
SYNE2-227ENST00000557307 C1QTNF4Q9BXJ3 329 aa7.77□□□□□ -1.17
SYNE2-227ENST00000557307 SMCO3A2RU48 225 aa7.76□□□□□ -1.17
SYNE2-227ENST00000557307 M0R2Z0 102 aa7.76□□□□□ -1.17
SYNE2-227ENST00000557307 ISLRO14498 428 aa7.76□□□□□ -1.17
SYNE2-227ENST00000557307 CCSO14618 274 aa7.76□□□□□ -1.17
SYNE2-227ENST00000557307 CRXO43186 299 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-227ENST00000557307 MED6O75586 246 aa7.76□□□□□ -1.17
SYNE2-227ENST00000557307 SNRPCP09234 159 aaKnown RBP7.76□□□□□ -1.17
SYNE2-227ENST00000557307 OR4E1P0C645 316 aa7.76□□□□□ -1.17
SYNE2-227ENST00000557307 NUP62P37198 522 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-227ENST00000557307 ID1P41134 155 aa7.76□□□□□ -1.17
SYNE2-227ENST00000557307 NUTF2P61970 127 aaKnown RBP7.76□□□□□ -1.17
SYNE2-227ENST00000557307 PSG9Q00887 426 aa7.76□□□□□ -1.17
SYNE2-227ENST00000557307 PATE2Q6UY27 113 aa7.76□□□□□ -1.17
SYNE2-227ENST00000557307 CYP2G1PQ6ZSU1 146 aa7.76□□□□□ -1.17
SYNE2-227ENST00000557307 C16orf92Q96LL3 132 aa7.76□□□□□ -1.17
SYNE2-227ENST00000557307 PSENENQ9NZ42 101 aa7.76□□□□□ -1.17
SYNE2-227ENST00000557307 DKK2Q9UBU2 259 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms