RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 Q5BKY6 102 aa6.85□□□□□ -1.31
SYNE2-224ENST00000557024 TMEM252Q8N6L7 170 aa6.85□□□□□ -1.31
SYNE2-224ENST00000557024 ZNF114Q8NC26 417 aa6.85□□□□□ -1.31
SYNE2-224ENST00000557024 RNASEH2CQ8TDP1 164 aaKnown RBP6.85□□□□□ -1.31
SYNE2-224ENST00000557024 SLC35E1Q96K37 410 aa6.85□□□□□ -1.31
SYNE2-224ENST00000557024 HYLS1Q96M11 299 aa6.85□□□□□ -1.31
SYNE2-224ENST00000557024 APLNQ9ULZ1 77 aa6.85□□□□□ -1.31
SYNE2-224ENST00000557024 MUC4Q99102 2169 aa6.85□□□□□ -1.31
SYNE2-224ENST00000557024 DNAH2Q9P225 4427 aa6.85□□□□□ -1.31
SYNE2-224ENST00000557024 TRBV9A0A0B4J1U6 114 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 KIR2DL5BA0A0G2JN68 375 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 KIR2DL5BA0A0G2JPC4 375 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 SMCO3A2RU48 225 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 RTL8CO15255 209 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 ARPC5O15511 151 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 SCGB2A1O75556 95 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 CST7O76096 145 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 IGHV3-23P01764 117 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 SULT1A1P50225 295 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 TCTAP57738 103 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 BAXQ07812 192 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 TOR2AQ5JU69 321 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 TMEM14EPQ6UXP3 125 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 RBPMS2Q6ZRY4 209 aaKnown RBP6.84□□□□□ -1.31
SYNE2-224ENST00000557024 ZNF575Q86XF7 245 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 KIR2DL5AQ8N109 375 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 NECAP1Q8NC96 275 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 OR1S2Q8NGQ3 325 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 KIR2DL5BQ8NHK3 375 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 S4R3C0 116 aa6.84□□□□□ -1.31
SYNE2-224ENST00000557024 IGHV3-21A0A0B4J1V1 117 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 IGSF23A1L1A6 192 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 HMSDA8MTL9 139 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 A8MWP6 167 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 DEFB4AO15263 64 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 TMEM50AO95807 157 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 MT-CO2P00403 227 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 S100A11P31949 105 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 MFAP2P55001 183 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 AKR1C1Q04828 323 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 SLC38A11Q08AI6 406 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 ATP6V1FQ16864 119 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 BSXQ3C1V8 233 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 Q56UQ5 140 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 CLEC19AQ6UXS0 136 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 C19orf35Q6ZS72 473 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 ACOT7LQ6ZUV0 252 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 GPHB5Q86YW7 130 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 UBAC2Q8NBM4 344 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 EEF1AKMT3Q96AZ1 226 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 CXorf58Q96LI9 332 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 C11orf1Q9H5F2 150 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 HSPB11Q9Y547 144 aa6.83□□□□□ -1.32
SYNE2-224ENST00000557024 IGLV11-55A0A075B6I3 123 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 TRAV25A0A0B4J276 109 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 A0A0D9SG52 128 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 KANTRA0A1W2PQU2 76 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 M0R2N4 97 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 DFFBO76075 338 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 IFNA5P01569 189 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 HNRNPCP07910 306 aaKnown RBP eCLIP6.82□□□□□ -1.32
SYNE2-224ENST00000557024 C4BPBP20851 252 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 ARL3P36405 182 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 GPX4P36969 197 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-224ENST00000557024 NPBWR1P48145 328 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 EIF2B2P49770 351 aaKnown RBP6.82□□□□□ -1.32
SYNE2-224ENST00000557024 MFAP4P55083 255 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 DLK1P80370 383 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 SRSF3P84103 164 aaKnown RBP6.82□□□□□ -1.32
SYNE2-224ENST00000557024 NHLH2Q02577 135 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 CD300CQ08708 224 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 OR2F1Q13607 317 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 ODF3L2Q3SX64 289 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 FAM106AQ4KMX7 169 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 FAM209BQ5JX69 171 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 OR11H4Q8NGC9 324 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 OR5C1Q8NGR4 320 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 VN1R17PQ8TDU5 208 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 AQP10Q96PS8 301 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 RARRES2Q99969 163 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 SMIM3Q9BZL3 60 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 C11orf68Q9H3H3 251 aaKnown RBP6.82□□□□□ -1.32
SYNE2-224ENST00000557024 MAP6D1Q9H9H5 199 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 TNFSF18Q9UNG2 199 aa6.82□□□□□ -1.32
SYNE2-224ENST00000557024 TRBV7-1A0A0A6YYK4 115 aa6.81□□□□□ -1.32
SYNE2-224ENST00000557024 BORCS7-ASMTA0A0B4J1R7 106 aa6.81□□□□□ -1.32
SYNE2-224ENST00000557024 G3V3Q6 166 aa6.81□□□□□ -1.32
SYNE2-224ENST00000557024 GNG7O60262 68 aa6.81□□□□□ -1.32
SYNE2-224ENST00000557024 IGHV3-48P01763 117 aa6.81□□□□□ -1.32
SYNE2-224ENST00000557024 RND2P52198 227 aa6.81□□□□□ -1.32
SYNE2-224ENST00000557024 CLINT1Q14677 625 aa6.81□□□□□ -1.32
SYNE2-224ENST00000557024 MLANAQ16655 118 aa6.81□□□□□ -1.32
SYNE2-224ENST00000557024 UNQ9165/PRO28630Q6UXU0 137 aa6.81□□□□□ -1.32
SYNE2-224ENST00000557024 OR11H2Q8NH07 326 aa6.81□□□□□ -1.32
SYNE2-224ENST00000557024 SCGB1C1Q8TD33 95 aa6.81□□□□□ -1.32
SYNE2-224ENST00000557024 SCARB1Q8WTV0 552 aa6.81□□□□□ -1.32
SYNE2-224ENST00000557024 ACY3Q96HD9 319 aa6.81□□□□□ -1.32
SYNE2-224ENST00000557024 SPAG8Q99932 426 aaPredicted RBP6.81□□□□□ -1.32
SYNE2-224ENST00000557024 TMEM147Q9BVK8 224 aa6.81□□□□□ -1.32
SYNE2-224ENST00000557024 GGACTQ9BVM4 153 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms