RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 S100A7P31151 101 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 MPV17P39210 176 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 LGALS7P47929 136 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 CEBPDP49716 269 aaPredicted RBP2.3□□□□□ -2.04
SLIRP-208ENST00000556956 FABP6P51161 128 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 DUSP3P51452 185 aaPredicted RBP2.3□□□□□ -2.04
SLIRP-208ENST00000556956 PRCDQ00LT1 54 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 SCGB2A2Q13296 93 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 EDDM3AQ14507 147 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 LTC4SQ16873 150 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 LGALS9BQ3B8N2 356 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 CT45A1Q5HYN5 189 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 C10orf113Q5VZT2 155 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 LGALS9CQ6DKI2 356 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 GUSBP11Q6P575 273 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 INO80CQ6PI98 192 aaPredicted RBP2.3□□□□□ -2.04
SLIRP-208ENST00000556956 ZNF474Q6S9Z5 364 aaPredicted RBP2.3□□□□□ -2.04
SLIRP-208ENST00000556956 ZNF841Q6ZN19 808 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 C2orf91Q6ZV80 131 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 PDPNQ86YL7 162 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 C11orf53Q8IXP5 236 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 RPRMLQ8N4K4 120 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 TPRX1Q8N7U7 411 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 TEX45Q8NA69 505 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 GATD1Q8NB37 220 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 OR2Z1Q8NG97 314 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 OR4A5Q8NH83 315 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 CT45A3Q8NHU0 189 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 RFESDQ8TAC1 157 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 FAM222BQ8WU58 562 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 PERPQ96FX8 193 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 URB1-AS1Q96HZ7 61 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 FAM167A-AS1Q96KT0 104 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 PGLYRP4Q96LB8 373 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 GUCD1Q96NT3 240 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 HINT2Q9BX68 163 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 SLC25A2Q9BXI2 301 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 NPFFR1Q9GZQ6 430 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 SIGLEC8Q9NYZ4 499 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 SH3BGRL2Q9UJC5 107 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 ZNF835Q9Y2P0 537 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 LOXL2Q9Y4K0 774 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 KLF12Q9Y4X4 402 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 SPCS1Q9Y6A9 102 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 EML5Q05BV3 1969 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 SCN2AQ99250 2005 aa2.3□□□□□ -2.04
SLIRP-208ENST00000556956 HEATR5AQ86XA9 2040 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 A0A1B0GUT8 65 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 TCRBV4S1A1TA0A5B7 111 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 PINLYPA6NC86 204 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 C19orf71A6NCJ1 209 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 EPOPA6NHQ4 379 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 SH2D7A6NKC9 451 aaPredicted RBP2.29□□□□□ -2.04
SLIRP-208ENST00000556956 SRRM4A7MD48 611 aaKnown RBP2.29□□□□□ -2.04
SLIRP-208ENST00000556956 F8W1H4 67 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 INS-IGF2F8WCM5 200 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 H0Y8G0 127 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 WNT9BO14905 357 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 GNG7O60262 68 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 MOSP00540 346 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 LTAP01374 205 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 APOHP02749 345 aaPredicted RBP2.29□□□□□ -2.04
SLIRP-208ENST00000556956 RNASE2P10153 161 aaKnown RBP2.29□□□□□ -2.04
SLIRP-208ENST00000556956 AZU1P20160 251 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 MYCNOSP40205 109 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 UQCRFS1P47985 274 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 ZNF137PP52743 207 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 FOXA3P55318 350 aaPredicted RBP2.29□□□□□ -2.04
SLIRP-208ENST00000556956 NANOS2P60321 138 aaKnown RBP2.29□□□□□ -2.04
SLIRP-208ENST00000556956 RPL24P83731 157 aaKnown RBP2.29□□□□□ -2.04
SLIRP-208ENST00000556956 GUSBP1Q15486 140 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 RPL39P5Q59GN2 51 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 Q6AWC8 147 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 FAM53AQ6NSI3 398 aaPredicted RBP2.29□□□□□ -2.04
SLIRP-208ENST00000556956 PRSS57Q6UWY2 283 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 WDR82Q6UXN9 313 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 Q6ZR03 302 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 ZNF826PQ6ZT77 177 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 SLC25A48Q6ZT89 311 aaKnown RBP2.29□□□□□ -2.04
SLIRP-208ENST00000556956 LINC00173Q6ZV60 143 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 BOD1L2Q8IYS8 172 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 VKORC1L1Q8N0U8 176 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 ZADH2Q8N4Q0 377 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 CD177Q8N6Q3 437 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 THAP8Q8NA92 274 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 OR10W1Q8NGF6 305 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 OR9G1Q8NH87 305 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 PIFOQ8TCI5 191 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 KLF14Q8TD94 323 aaPredicted RBP2.29□□□□□ -2.04
SLIRP-208ENST00000556956 BLNKQ8WV28 456 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 LRRC29Q8WV35 223 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 FXYD5Q96DB9 178 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 LINC00479Q96M42 142 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 ATP6V0BQ99437 205 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 AKIRIN1Q9H9L7 192 aaPredicted RBP2.29□□□□□ -2.04
SLIRP-208ENST00000556956 OTORQ9NRC9 128 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 CALYQ9NYX4 217 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 HIGD1BQ9P298 99 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 SMPXQ9UHP9 88 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 RABAC1Q9UI14 185 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms