RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 ZNF256Q9Y2P7 627 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-243ENST00000556671 TMEM56-RWDD3S4R434 201 aa3.53□□□□□ -1.84
ATXN3-243ENST00000556671 A0A0B4J2A0 478 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 PIGBOS1A0A0B4J2F0 54 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 A0A1B0GU03 582 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 A4D1N5 150 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 IZUMO1RA6ND01 250 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 K7EIL1 84 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 TGOLN2O43493 480 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 MED6O75586 246 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 ADAP1O75689 374 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 BRI3O95415 125 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 CSN3P07498 182 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 RNASE2P10153 161 aaKnown RBP3.52□□□□□ -1.85
ATXN3-243ENST00000556671 FOLR2P14207 255 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 CBLN1P23435 193 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 HTR2BP41595 481 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 NPBWR1P48145 328 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 TFPI2P48307 235 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 RAB11AP62491 216 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 IFITM3Q01628 133 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 SPANXN5Q5MJ07 72 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 LYG2Q86SG7 212 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 GTSCR1Q86UQ5 136 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 GPHB5Q86YW7 130 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 ZNF502Q8TBZ5 544 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 DTD1Q8TEA8 209 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 CACNG8Q8WXS5 425 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 IL22RA2Q969J5 263 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 GALNT14Q96FL9 552 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 ACY3Q96HD9 319 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 SEC22CQ9BRL7 303 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 CHRDL1Q9BU40 450 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 SHPKQ9UHJ6 478 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 UFC1Q9Y3C8 167 aa3.52□□□□□ -1.85
ATXN3-243ENST00000556671 TRAV14DV4A0A0A6YYC5 116 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 IGHV3-66A0A0C4DH42 116 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 SMCO3A2RU48 225 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 C2orf70A6NJV1 201 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 I3L2K1 104 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 K7EIM0 57 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 L7N2F9 121 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 DNASE2O00115 360 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-243ENST00000556671 CORTO00230 105 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 CCSO14618 274 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 SYNGR2O43760 224 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 SCGB2A1O75556 95 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 CCNKO75909 580 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 TMEM50AO95807 157 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 CTSGP08311 255 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 NPY1RP25929 384 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 RELQ04864 619 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-243ENST00000556671 TNFRSF9Q07011 255 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 DHRS2Q13268 280 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 ASAH1Q13510 395 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 IAH1Q2TAA2 248 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-243ENST00000556671 TIGITQ495A1 244 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 PAPPA-AS1Q5QFB9 102 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 KPRPQ5T749 579 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-243ENST00000556671 LAMTOR1Q6IAA8 161 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 ETFRF1Q6IPR1 90 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 LCN12Q6JVE5 192 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 UNQ9165/PRO28630Q6UXU0 137 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 GBGT1Q8N5D6 347 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 C12orf45Q8N5I9 185 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-243ENST00000556671 SLC24A4Q8NFF2 622 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 OR52E5Q8NH55 327 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 DEDD2Q8WXF8 326 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 BSCL2Q96G97 398 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-243ENST00000556671 TXN2Q99757 166 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 C20orf85Q9H1P6 137 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 GPN1Q9HCN4 374 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-243ENST00000556671 NUDT15Q9NV35 164 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 PSENENQ9NZ42 101 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 CACFD1Q9UGQ2 172 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 TMED3Q9Y3Q3 217 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 LSM5Q9Y4Y9 91 aaKnown RBP3.51□□□□□ -1.85
ATXN3-243ENST00000556671 SMAD5-AS1Q9Y6J3 95 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 FBN3Q75N90 2809 aa3.51□□□□□ -1.85
ATXN3-243ENST00000556671 TRAV30A0A087WSZ9 112 aa3.5□□□□□ -1.85
ATXN3-243ENST00000556671 DUXBA0A1W2PPF3 345 aa3.5□□□□□ -1.85
ATXN3-243ENST00000556671 ZFP92A6NM28 416 aa3.5□□□□□ -1.85
ATXN3-243ENST00000556671 MPTX1A8MV57 137 aa3.5□□□□□ -1.85
ATXN3-243ENST00000556671 H3BP45 60 aa3.5□□□□□ -1.85
ATXN3-243ENST00000556671 LGALS9O00182 355 aa3.5□□□□□ -1.85
ATXN3-243ENST00000556671 NDUFA4O00483 81 aa3.5□□□□□ -1.85
ATXN3-243ENST00000556671 SSNA1O43805 119 aa3.5□□□□□ -1.85
ATXN3-243ENST00000556671 SSSCA1O60232 199 aa3.5□□□□□ -1.85
ATXN3-243ENST00000556671 IGLV1-51P01701 117 aa3.5□□□□□ -1.85
ATXN3-243ENST00000556671 P0C879 139 aa3.5□□□□□ -1.85
ATXN3-243ENST00000556671 NPPCP23582 126 aa3.5□□□□□ -1.85
ATXN3-243ENST00000556671 OR10J1P30954 320 aa3.5□□□□□ -1.85
ATXN3-243ENST00000556671 NKX2-1P43699 371 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-243ENST00000556671 RND2P52198 227 aa3.5□□□□□ -1.85
ATXN3-243ENST00000556671 CD81P60033 236 aa3.5□□□□□ -1.85
ATXN3-243ENST00000556671 S100A10P60903 97 aa3.5□□□□□ -1.85
ATXN3-243ENST00000556671 RRAS2P62070 204 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-243ENST00000556671 POLR2GP62487 172 aaKnown RBP eCLIP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms