RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 PPP1R1AQ13522 171 aa8.46□□□□□ -1.06
ACTN1-221ENST00000556571 SMCO1Q147U7 214 aa8.46□□□□□ -1.06
ACTN1-221ENST00000556571 AARDQ4LEZ3 155 aa8.46□□□□□ -1.06
ACTN1-221ENST00000556571 NOXA1Q86UR1 476 aa8.46□□□□□ -1.06
ACTN1-221ENST00000556571 OR1S1Q8NH92 325 aa8.46□□□□□ -1.06
ACTN1-221ENST00000556571 SDHCQ99643 169 aaPredicted RBP8.46□□□□□ -1.06
ACTN1-221ENST00000556571 NIPSNAP3BQ9BS92 247 aa8.46□□□□□ -1.06
ACTN1-221ENST00000556571 CCDC32Q9BV29 185 aa8.46□□□□□ -1.06
ACTN1-221ENST00000556571 NRN1Q9NPD7 142 aa8.46□□□□□ -1.06
ACTN1-221ENST00000556571 DKK2Q9UBU2 259 aa8.46□□□□□ -1.06
ACTN1-221ENST00000556571 RFNGQ9Y644 331 aa8.46□□□□□ -1.06
ACTN1-221ENST00000556571 RPS10-NUDT3A0A1W2PQS6 291 aa8.45□□□□□ -1.06
ACTN1-221ENST00000556571 HLA-DRB4P13762 266 aa8.45□□□□□ -1.06
ACTN1-221ENST00000556571 NKX2-1P43699 371 aaPredicted RBP8.45□□□□□ -1.06
ACTN1-221ENST00000556571 FAM3BP58499 235 aaPredicted RBP8.45□□□□□ -1.06
ACTN1-221ENST00000556571 YPEL3P61236 119 aaPredicted RBP8.45□□□□□ -1.06
ACTN1-221ENST00000556571 OXA1LQ15070 435 aa8.45□□□□□ -1.06
ACTN1-221ENST00000556571 C4orf46Q504U0 113 aa8.45□□□□□ -1.06
ACTN1-221ENST00000556571 NMSQ5H8A3 153 aa8.45□□□□□ -1.06
ACTN1-221ENST00000556571 MAPKAPK5-AS1Q8N8E1 139 aa8.45□□□□□ -1.06
ACTN1-221ENST00000556571 OR1S2Q8NGQ3 325 aa8.45□□□□□ -1.06
ACTN1-221ENST00000556571 PTTG2Q9NZH5 202 aa8.45□□□□□ -1.06
ACTN1-221ENST00000556571 TMED3Q9Y3Q3 217 aa8.45□□□□□ -1.06
ACTN1-221ENST00000556571 HLA-DRB4X5D2U9 266 aa8.45□□□□□ -1.06
ACTN1-221ENST00000556571 LRP1BQ9NZR2 4599 aa8.45□□□□□ -1.06
ACTN1-221ENST00000556571 LYRM1O43325 122 aa8.44□□□□□ -1.06
ACTN1-221ENST00000556571 IGLC1P0CG04 106 aa8.44□□□□□ -1.06
ACTN1-221ENST00000556571 BSXQ3C1V8 233 aa8.44□□□□□ -1.06
ACTN1-221ENST00000556571 FAM222AQ5U5X8 452 aa8.44□□□□□ -1.06
ACTN1-221ENST00000556571 MZT2BQ6NZ67 158 aa8.44□□□□□ -1.06
ACTN1-221ENST00000556571 LRTM2Q8N967 370 aa8.44□□□□□ -1.06
ACTN1-221ENST00000556571 SLC24A4Q8NFF2 622 aa8.44□□□□□ -1.06
ACTN1-221ENST00000556571 COQ8AQ8NI60 647 aa8.44□□□□□ -1.06
ACTN1-221ENST00000556571 WDR12Q9GZL7 423 aaKnown RBP8.44□□□□□ -1.06
ACTN1-221ENST00000556571 IGHV3OR16-12A0A075B7B8 117 aa8.43□□□□□ -1.06
ACTN1-221ENST00000556571 C9orf170A2RU37 121 aa8.43□□□□□ -1.06
ACTN1-221ENST00000556571 BUB3O43684 328 aa8.43□□□□□ -1.06
ACTN1-221ENST00000556571 HOXB5P09067 269 aa8.43□□□□□ -1.06
ACTN1-221ENST00000556571 SLC25A4P12235 298 aa8.43□□□□□ -1.06
ACTN1-221ENST00000556571 HTN3P15516 51 aa8.43□□□□□ -1.06
ACTN1-221ENST00000556571 OR10J1P30954 320 aa8.43□□□□□ -1.06
ACTN1-221ENST00000556571 TNP2Q05952 138 aa8.43□□□□□ -1.06
ACTN1-221ENST00000556571 SIGLEC15Q6ZMC9 328 aa8.43□□□□□ -1.06
ACTN1-221ENST00000556571 DTD1Q8TEA8 209 aa8.43□□□□□ -1.06
ACTN1-221ENST00000556571 HSPB7Q9UBY9 170 aa8.43□□□□□ -1.06
ACTN1-221ENST00000556571 FLVCR2Q9UPI3 526 aa8.43□□□□□ -1.06
ACTN1-221ENST00000556571 MED6O75586 246 aa8.42□□□□□ -1.06
ACTN1-221ENST00000556571 IL4P05112 153 aa8.42□□□□□ -1.06
ACTN1-221ENST00000556571 OR4E1P0C645 316 aa8.42□□□□□ -1.06
ACTN1-221ENST00000556571 SLC25A6P12236 298 aa8.42□□□□□ -1.06
ACTN1-221ENST00000556571 ANXA7P20073 488 aaKnown RBP8.42□□□□□ -1.06
ACTN1-221ENST00000556571 RND2P52198 227 aa8.42□□□□□ -1.06
ACTN1-221ENST00000556571 ZNF846Q147U1 533 aa8.42□□□□□ -1.06
ACTN1-221ENST00000556571 USF2Q15853 346 aaPredicted RBP8.42□□□□□ -1.06
ACTN1-221ENST00000556571 C2orf83Q53S99 150 aa8.42□□□□□ -1.06
ACTN1-221ENST00000556571 ETFRF1Q6IPR1 90 aa8.42□□□□□ -1.06
ACTN1-221ENST00000556571 PRSS54Q6PEW0 395 aa8.42□□□□□ -1.06
ACTN1-221ENST00000556571 TMEM88Q6PEY1 159 aa8.42□□□□□ -1.06
ACTN1-221ENST00000556571 C15orf53Q8NAA6 179 aa8.42□□□□□ -1.06
ACTN1-221ENST00000556571 RNASEH2CQ8TDP1 164 aaKnown RBP8.42□□□□□ -1.06
ACTN1-221ENST00000556571 CLUHP3Q96NS8 147 aa8.42□□□□□ -1.06
ACTN1-221ENST00000556571 C20orf85Q9H1P6 137 aa8.42□□□□□ -1.06
ACTN1-221ENST00000556571 RBKSQ9H477 322 aa8.42□□□□□ -1.06
ACTN1-221ENST00000556571 U3KQ87 197 aa8.42□□□□□ -1.06
ACTN1-221ENST00000556571 DNAH5Q8TE73 4624 aa8.41□□□□□ -1.06
ACTN1-221ENST00000556571 FAM240BA0A1B0GVZ2 78 aa8.41□□□□□ -1.06
ACTN1-221ENST00000556571 PLA2G10O15496 165 aa8.41□□□□□ -1.06
ACTN1-221ENST00000556571 IGKV3-20P01619 116 aa8.41□□□□□ -1.06
ACTN1-221ENST00000556571 HBE1P02100 147 aa8.41□□□□□ -1.06
ACTN1-221ENST00000556571 RD3LP0DJH9 198 aa8.41□□□□□ -1.06
ACTN1-221ENST00000556571 BTCP35070 178 aa8.41□□□□□ -1.06
ACTN1-221ENST00000556571 ATP5IP56385 69 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-221ENST00000556571 FXYD7P58549 80 aa8.41□□□□□ -1.06
ACTN1-221ENST00000556571 RPP30P78346 268 aaKnown RBP8.41□□□□□ -1.06
ACTN1-221ENST00000556571 GDF5OSQ5U4N7 250 aa8.41□□□□□ -1.06
ACTN1-221ENST00000556571 GGNBP1Q5YKI7 109 aa8.41□□□□□ -1.06
ACTN1-221ENST00000556571 FOXI2Q6ZQN5 318 aa8.41□□□□□ -1.06
ACTN1-221ENST00000556571 Q8N1X5 172 aa8.41□□□□□ -1.06
ACTN1-221ENST00000556571 CIB3Q96Q77 187 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-221ENST00000556571 ATG101Q9BSB4 218 aa8.41□□□□□ -1.06
ACTN1-221ENST00000556571 SAV1Q9H4B6 383 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-221ENST00000556571 NUDT15Q9NV35 164 aa8.41□□□□□ -1.06
ACTN1-221ENST00000556571 PAIP2BQ9ULR5 123 aaKnown RBP8.41□□□□□ -1.06
ACTN1-221ENST00000556571 GOLT1BQ9Y3E0 138 aa8.41□□□□□ -1.06
ACTN1-221ENST00000556571 YTHDF2Q9Y5A9 579 aaKnown RBP8.41□□□□□ -1.06
ACTN1-221ENST00000556571 HERC1Q15751 4861 aa8.41□□□□□ -1.06
ACTN1-221ENST00000556571 TRAV6A0A075B6T7 132 aa8.4□□□□□ -1.06
ACTN1-221ENST00000556571 LOC102723971A0A1B0GUV8 181 aa8.4□□□□□ -1.06
ACTN1-221ENST00000556571 WRBO00258 174 aa8.4□□□□□ -1.06
ACTN1-221ENST00000556571 TOMM40O96008 361 aa8.4□□□□□ -1.06
ACTN1-221ENST00000556571 TCRBP04435 133 aa8.4□□□□□ -1.06
ACTN1-221ENST00000556571 NUP62P37198 522 aaPredicted RBP8.4□□□□□ -1.06
ACTN1-221ENST00000556571 ID1P41134 155 aa8.4□□□□□ -1.06
ACTN1-221ENST00000556571 DAD1P61803 113 aa8.4□□□□□ -1.06
ACTN1-221ENST00000556571 RAB11AP62491 216 aa8.4□□□□□ -1.06
ACTN1-221ENST00000556571 SPATA31B1PQ5VZV4 182 aa8.4□□□□□ -1.06
ACTN1-221ENST00000556571 GSG1LQ6UXU4 331 aa8.4□□□□□ -1.06
ACTN1-221ENST00000556571 C6orf223Q8N319 242 aa8.4□□□□□ -1.06
ACTN1-221ENST00000556571 ZNF709Q8N972 641 aa8.4□□□□□ -1.06
ACTN1-221ENST00000556571 LINC00052Q96N35 136 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms