RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 KIR2DL5BA0A0G2JPC4 375 aa11.21□□□□□ -0.61
ACTN1-217ENST00000556203 DEDDO75618 318 aa11.21□□□□□ -0.61
ACTN1-217ENST00000556203 CST7O76096 145 aa11.21□□□□□ -0.61
ACTN1-217ENST00000556203 SLC38A11Q08AI6 406 aa11.21□□□□□ -0.61
ACTN1-217ENST00000556203 C1orf194Q5T5A4 169 aa11.21□□□□□ -0.61
ACTN1-217ENST00000556203 KIR2DL5AQ8N109 375 aa11.21□□□□□ -0.61
ACTN1-217ENST00000556203 OR1B1Q8NGR6 318 aa11.21□□□□□ -0.61
ACTN1-217ENST00000556203 KIR2DL5BQ8NHK3 375 aa11.21□□□□□ -0.61
ACTN1-217ENST00000556203 OVOL2Q9BRP0 275 aa11.21□□□□□ -0.61
ACTN1-217ENST00000556203 TMEM147Q9BVK8 224 aa11.21□□□□□ -0.61
ACTN1-217ENST00000556203 GGACTQ9BVM4 153 aa11.21□□□□□ -0.61
ACTN1-217ENST00000556203 EDA2RQ9HAV5 297 aa11.21□□□□□ -0.61
ACTN1-217ENST00000556203 LYRM2Q9NU23 88 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-217ENST00000556203 DOK5Q9P104 306 aa11.21□□□□□ -0.61
ACTN1-217ENST00000556203 UBE2CO00762 179 aa11.2□□□□□ -0.62
ACTN1-217ENST00000556203 SSNA1O43805 119 aa11.2□□□□□ -0.62
ACTN1-217ENST00000556203 TEPPQ6URK8 271 aa11.2□□□□□ -0.62
ACTN1-217ENST00000556203 OR8I2Q8N0Y5 310 aa11.2□□□□□ -0.62
ACTN1-217ENST00000556203 TMEM217Q8N7C4 229 aa11.2□□□□□ -0.62
ACTN1-217ENST00000556203 FBXL17Q9UF56 701 aa11.2□□□□□ -0.62
ACTN1-217ENST00000556203 SLC45A2Q9UMX9 530 aa11.2□□□□□ -0.62
ACTN1-217ENST00000556203 IGSF23A1L1A6 192 aa11.19□□□□□ -0.62
ACTN1-217ENST00000556203 LINC00869P0C866 280 aa11.19□□□□□ -0.62
ACTN1-217ENST00000556203 DEFB135Q30KP9 77 aa11.19□□□□□ -0.62
ACTN1-217ENST00000556203 PSMG4Q5JS54 123 aa11.19□□□□□ -0.62
ACTN1-217ENST00000556203 Q6ZWC4 215 aa11.19□□□□□ -0.62
ACTN1-217ENST00000556203 TMEM252Q8N6L7 170 aa11.19□□□□□ -0.62
ACTN1-217ENST00000556203 MUC7Q8TAX7 377 aa11.19□□□□□ -0.62
ACTN1-217ENST00000556203 NMES1Q9C002 83 aa11.19□□□□□ -0.62
ACTN1-217ENST00000556203 CSTL1Q9H114 145 aa11.19□□□□□ -0.62
ACTN1-217ENST00000556203 SLC25A22Q9H936 323 aa11.19□□□□□ -0.62
ACTN1-217ENST00000556203 ZNF98A6NK75 572 aa11.18□□□□□ -0.62
ACTN1-217ENST00000556203 KNCNA6PVL3 124 aa11.18□□□□□ -0.62
ACTN1-217ENST00000556203 HYPMO75409 117 aa11.18□□□□□ -0.62
ACTN1-217ENST00000556203 S100A7P31151 101 aa11.18□□□□□ -0.62
ACTN1-217ENST00000556203 SULT1A1P50225 295 aa11.18□□□□□ -0.62
ACTN1-217ENST00000556203 H2BFSP57053 126 aa11.18□□□□□ -0.62
ACTN1-217ENST00000556203 SNRPD3P62318 126 aaKnown RBP11.18□□□□□ -0.62
ACTN1-217ENST00000556203 SELENOTP62341 195 aa11.18□□□□□ -0.62
ACTN1-217ENST00000556203 LRRC37A5PQ49AS3 106 aa11.18□□□□□ -0.62
ACTN1-217ENST00000556203 STX12Q86Y82 276 aa11.18□□□□□ -0.62
ACTN1-217ENST00000556203 STHQ8IWL8 128 aa11.18□□□□□ -0.62
ACTN1-217ENST00000556203 SLC25A32Q9H2D1 315 aa11.18□□□□□ -0.62
ACTN1-217ENST00000556203 C3orf84H3BNL1 204 aa11.17□□□□□ -0.62
ACTN1-217ENST00000556203 AGPAT2O15120 278 aa11.17□□□□□ -0.62
ACTN1-217ENST00000556203 SPRY2O43597 315 aa11.17□□□□□ -0.62
ACTN1-217ENST00000556203 PTTG1O95997 202 aa11.17□□□□□ -0.62
ACTN1-217ENST00000556203 OR5G3P0C626 314 aa11.17□□□□□ -0.62
ACTN1-217ENST00000556203 PLP1P60201 277 aa11.17□□□□□ -0.62
ACTN1-217ENST00000556203 RAP2BP61225 183 aa11.17□□□□□ -0.62
ACTN1-217ENST00000556203 CYCSP99999 105 aaKnown RBP11.17□□□□□ -0.62
ACTN1-217ENST00000556203 ACTL10Q5JWF8 245 aa11.17□□□□□ -0.62
ACTN1-217ENST00000556203 ZNF546Q86UE3 836 aa11.17□□□□□ -0.62
ACTN1-217ENST00000556203 MGST2Q99735 147 aa11.17□□□□□ -0.62
ACTN1-217ENST00000556203 SCRT1Q9BWW7 348 aa11.17□□□□□ -0.62
ACTN1-217ENST00000556203 SLC25A39Q9BZJ4 359 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-217ENST00000556203 SEPSECSQ9HD40 501 aaKnown RBP11.17□□□□□ -0.62
ACTN1-217ENST00000556203 UQCC1Q9NVA1 299 aa11.17□□□□□ -0.62
ACTN1-217ENST00000556203 HIGD1AQ9Y241 93 aa11.17□□□□□ -0.62
ACTN1-217ENST00000556203 TP53TG1Q9Y2A0 90 aa11.17□□□□□ -0.62
ACTN1-217ENST00000556203 H3BRN7 92 aa11.16□□□□□ -0.62
ACTN1-217ENST00000556203 RLN2P04090 185 aa11.16□□□□□ -0.62
ACTN1-217ENST00000556203 S100A11P31949 105 aa11.16□□□□□ -0.62
ACTN1-217ENST00000556203 GALR1P47211 349 aa11.16□□□□□ -0.62
ACTN1-217ENST00000556203 HBG1P69891 147 aa11.16□□□□□ -0.62
ACTN1-217ENST00000556203 HBG2P69892 147 aa11.16□□□□□ -0.62
ACTN1-217ENST00000556203 TRPT1Q86TN4 253 aaKnown RBP11.16□□□□□ -0.62
ACTN1-217ENST00000556203 RNF183Q96D59 192 aa11.16□□□□□ -0.62
ACTN1-217ENST00000556203 SHANK2-AS3Q9BTD1 123 aa11.16□□□□□ -0.62
ACTN1-217ENST00000556203 OR5AC2Q9NZP5 309 aa11.16□□□□□ -0.62
ACTN1-217ENST00000556203 UBE2L5PA0A1B0GUS4 154 aa11.15□□□□□ -0.62
ACTN1-217ENST00000556203 E5RGE8 158 aa11.15□□□□□ -0.62
ACTN1-217ENST00000556203 H0YIZ8 118 aa11.15□□□□□ -0.62
ACTN1-217ENST00000556203 SOCS3O14543 225 aa11.15□□□□□ -0.62
ACTN1-217ENST00000556203 CA1P00915 261 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-217ENST00000556203 ID1P41134 155 aa11.15□□□□□ -0.62
ACTN1-217ENST00000556203 VWC2Q2TAL6 325 aa11.15□□□□□ -0.62
ACTN1-217ENST00000556203 PPP1R1CQ8WVI7 109 aa11.15□□□□□ -0.62
ACTN1-217ENST00000556203 LINC00052Q96N35 136 aa11.15□□□□□ -0.62
ACTN1-217ENST00000556203 UHRF2Q96PU4 802 aa11.15□□□□□ -0.62
ACTN1-217ENST00000556203 RSG1Q9BU20 258 aa11.15□□□□□ -0.62
ACTN1-217ENST00000556203 ARL6Q9H0F7 186 aa11.15□□□□□ -0.62
ACTN1-217ENST00000556203 WDR83OSQ9Y284 106 aa11.15□□□□□ -0.62
ACTN1-217ENST00000556203 ALG5Q9Y673 324 aa11.15□□□□□ -0.62
ACTN1-217ENST00000556203 STAB2Q8WWQ8 2551 aa11.15□□□□□ -0.63
ACTN1-217ENST00000556203 LYL1P12980 280 aa11.14□□□□□ -0.63
ACTN1-217ENST00000556203 CAMLGP49069 296 aa11.14□□□□□ -0.63
ACTN1-217ENST00000556203 PSMB3P49720 205 aa11.14□□□□□ -0.63
ACTN1-217ENST00000556203 EWSR1Q01844 656 aaKnown RBP eCLIP11.14□□□□□ -0.63
ACTN1-217ENST00000556203 RAB31Q13636 194 aa11.14□□□□□ -0.63
ACTN1-217ENST00000556203 PATE2Q6UY27 113 aa11.14□□□□□ -0.63
ACTN1-217ENST00000556203 GPR82Q96P67 336 aa11.14□□□□□ -0.63
ACTN1-217ENST00000556203 SLC25A31Q9H0C2 315 aa11.14□□□□□ -0.63
ACTN1-217ENST00000556203 ARV1Q9H2C2 271 aa11.14□□□□□ -0.63
ACTN1-217ENST00000556203 TENM3Q9P273 2699 aa11.14□□□□□ -0.63
ACTN1-217ENST00000556203 NHLH2Q02577 135 aa11.13□□□□□ -0.63
ACTN1-217ENST00000556203 BAXQ07812 192 aa11.13□□□□□ -0.63
ACTN1-217ENST00000556203 ATP6V1FQ16864 119 aa11.13□□□□□ -0.63
ACTN1-217ENST00000556203 PXDC1Q5TGL8 231 aa11.13□□□□□ -0.63
ACTN1-217ENST00000556203 SAMD13Q5VXD3 122 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms