RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 UBE2DNLQ8IWF7 75 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 LINC00469Q8N7U9 141 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 Q9UFV3 132 aa8.78□□□□□ -1
ACTN1-216ENST00000556083 F8WEM9 126 aa8.77□□□□□ -1
ACTN1-216ENST00000556083 H3BUX3 64 aa8.77□□□□□ -1
ACTN1-216ENST00000556083 SLAQ13239 276 aa8.77□□□□□ -1
ACTN1-216ENST00000556083 SRSF6Q13247 344 aaKnown RBP8.77□□□□□ -1
ACTN1-216ENST00000556083 PIP4P2Q8N4L2 257 aa8.77□□□□□ -1
ACTN1-216ENST00000556083 TDRD6O60522 2096 aaKnown RBP8.77□□□□□ -1.01
ACTN1-216ENST00000556083 EP300Q09472 2414 aaPredicted RBP8.77□□□□□ -1.01
ACTN1-216ENST00000556083 ZNHIT1O43257 154 aa8.77□□□□□ -1.01
ACTN1-216ENST00000556083 NDUFA3O95167 84 aa8.77□□□□□ -1.01
ACTN1-216ENST00000556083 GATA2P23769 480 aaPredicted RBP8.77□□□□□ -1.01
ACTN1-216ENST00000556083 BOD1L2Q8IYS8 172 aa8.77□□□□□ -1.01
ACTN1-216ENST00000556083 RNASE7Q9H1E1 156 aaKnown RBP8.77□□□□□ -1.01
ACTN1-216ENST00000556083 DOCK6Q96HP0 2047 aa8.77□□□□□ -1.01
ACTN1-216ENST00000556083 SBF2Q86WG5 1849 aa8.77□□□□□ -1.01
ACTN1-216ENST00000556083 A0A0A6YYD4 124 aa8.77□□□□□ -1.01
ACTN1-216ENST00000556083 UBE2CO00762 179 aa8.77□□□□□ -1.01
ACTN1-216ENST00000556083 SS18Q15532 418 aa8.77□□□□□ -1.01
ACTN1-216ENST00000556083 MUC21Q5SSG8 566 aa8.77□□□□□ -1.01
ACTN1-216ENST00000556083 C1orf122Q6ZSJ8 110 aa8.77□□□□□ -1.01
ACTN1-216ENST00000556083 CD177Q8N6Q3 437 aa8.77□□□□□ -1.01
ACTN1-216ENST00000556083 SHANK2-AS3Q9BTD1 123 aa8.77□□□□□ -1.01
ACTN1-216ENST00000556083 PYYP10082 97 aa8.77□□□□□ -1.01
ACTN1-216ENST00000556083 SRD5A1P18405 259 aa8.77□□□□□ -1.01
ACTN1-216ENST00000556083 TRPT1Q86TN4 253 aaKnown RBP8.77□□□□□ -1.01
ACTN1-216ENST00000556083 LY6G5BQ8NDX9 201 aa8.77□□□□□ -1.01
ACTN1-216ENST00000556083 MSMBP08118 114 aa8.76□□□□□ -1.01
ACTN1-216ENST00000556083 DOCK3Q8IZD9 2030 aa8.76□□□□□ -1.01
ACTN1-216ENST00000556083 C8orf31Q8N9H6 132 aa8.76□□□□□ -1.01
ACTN1-216ENST00000556083 E9PQ18 207 aa8.76□□□□□ -1.01
ACTN1-216ENST00000556083 ADMP35318 185 aa8.76□□□□□ -1.01
ACTN1-216ENST00000556083 INTS1Q8N201 2190 aaKnown RBP8.76□□□□□ -1.01
ACTN1-216ENST00000556083 RALGAPA1Q6GYQ0 2036 aa8.76□□□□□ -1.01
ACTN1-216ENST00000556083 PMS2P5A8MQ11 134 aa8.76□□□□□ -1.01
ACTN1-216ENST00000556083 PSPNO60542 156 aa8.76□□□□□ -1.01
ACTN1-216ENST00000556083 LINC01551Q86U37 167 aa8.76□□□□□ -1.01
ACTN1-216ENST00000556083 CDK2AP2O75956 126 aa8.75□□□□□ -1.01
ACTN1-216ENST00000556083 CLPSP04118 112 aa8.75□□□□□ -1.01
ACTN1-216ENST00000556083 CHAC1Q9BUX1 264 aa8.75□□□□□ -1.01
ACTN1-216ENST00000556083 CEACAM8P31997 349 aaPredicted RBP8.75□□□□□ -1.01
ACTN1-216ENST00000556083 GNG5P63218 68 aa8.75□□□□□ -1.01
ACTN1-216ENST00000556083 ERCC8Q13216 396 aa8.75□□□□□ -1.01
ACTN1-216ENST00000556083 TMEM141Q96I45 108 aa8.75□□□□□ -1.01
ACTN1-216ENST00000556083 CD33P20138 364 aa8.75□□□□□ -1.01
ACTN1-216ENST00000556083 QRFPP83859 136 aa8.75□□□□□ -1.01
ACTN1-216ENST00000556083 KLF17Q5JT82 389 aaPredicted RBP8.75□□□□□ -1.01
ACTN1-216ENST00000556083 DMRTA1Q5VZB9 504 aa8.75□□□□□ -1.01
ACTN1-216ENST00000556083 TMEM75Q8N9X5 138 aa8.75□□□□□ -1.01
ACTN1-216ENST00000556083 A0A1W2PRX2 142 aa8.75□□□□□ -1.01
ACTN1-216ENST00000556083 SRRM4A7MD48 611 aaKnown RBP8.75□□□□□ -1.01
ACTN1-216ENST00000556083 RNASE2P10153 161 aaKnown RBP8.75□□□□□ -1.01
ACTN1-216ENST00000556083 TDGF1P3P51864 188 aa8.75□□□□□ -1.01
ACTN1-216ENST00000556083 ZNF876PQ49A33 203 aa8.75□□□□□ -1.01
ACTN1-216ENST00000556083 ATOH7Q8N100 152 aa8.75□□□□□ -1.01
ACTN1-216ENST00000556083 C14orf144Q96I85 54 aa8.75□□□□□ -1.01
ACTN1-216ENST00000556083 ZNF479Q96JC4 524 aa8.75□□□□□ -1.01
ACTN1-216ENST00000556083 MGST2Q99735 147 aa8.75□□□□□ -1.01
ACTN1-216ENST00000556083 S4R3C0 116 aa8.75□□□□□ -1.01
ACTN1-216ENST00000556083 A0A1B0GV90 55 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 IGKV1-5P01602 117 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 LINC00158P58513 81 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 FGFBP3Q8TAT2 258 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 DOCK4Q8N1I0 1966 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 ZCCHC24Q8N2G6 241 aaKnown RBP8.74□□□□□ -1.01
ACTN1-216ENST00000556083 CST9LQ9H4G1 147 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 TRAV8-2A0A0B4J237 113 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 ELANEP08246 267 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 SFTA2Q6UW10 78 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 GFI1Q99684 422 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 RHPN1-AS1Q9BWJ2 59 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 NPIPB5A8MRT5 1133 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 MLNRO43193 412 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 HIST1H2BKO60814 126 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 HIST1H2BJP06899 126 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 HIST1H2BOP23527 126 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 HIST1H2BBP33778 126 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 HIST1H2BDP58876 126 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 HIST1H2BCP62807 126 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 HIST2H2BEQ16778 126 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.74□□□□□ -1.01
ACTN1-216ENST00000556083 HIST1H2BHQ93079 126 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 HIST1H2BNQ99877 126 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 HIST1H2BMQ99879 126 aa8.74□□□□□ -1.01
ACTN1-216ENST00000556083 LEPROTO15243 131 aa8.73□□□□□ -1.01
ACTN1-216ENST00000556083 IGF2-ASQ6U949 168 aa8.73□□□□□ -1.01
ACTN1-216ENST00000556083 BCL6BQ8N143 479 aaPredicted RBP8.73□□□□□ -1.01
ACTN1-216ENST00000556083 NHP2Q9NX24 153 aaKnown RBP8.73□□□□□ -1.01
ACTN1-216ENST00000556083 ESPL1Q14674 2120 aa8.73□□□□□ -1.01
ACTN1-216ENST00000556083 NDUFA4O00483 81 aa8.73□□□□□ -1.01
ACTN1-216ENST00000556083 APOC4P55056 127 aa8.73□□□□□ -1.01
ACTN1-216ENST00000556083 RPP25LQ8N5L8 163 aaKnown RBP8.73□□□□□ -1.01
ACTN1-216ENST00000556083 TMEM14CQ9P0S9 112 aa8.73□□□□□ -1.01
ACTN1-216ENST00000556083 KAAG1Q9UBP8 84 aa8.73□□□□□ -1.01
ACTN1-216ENST00000556083 IGKV1D-17A0A075B6S4 117 aa8.73□□□□□ -1.01
ACTN1-216ENST00000556083 IGKV1-27A0A075B6S5 117 aa8.73□□□□□ -1.01
ACTN1-216ENST00000556083 TEX48A0A1B0GUV7 120 aa8.73□□□□□ -1.01
ACTN1-216ENST00000556083 K7EMI3 77 aa8.73□□□□□ -1.01
ACTN1-216ENST00000556083 SPXQ9BT56 116 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms