RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 SLC25A4P12235 298 aa4.65□□□□□ -1.67
TMEM260-209ENST00000556079 NANOS2P60321 138 aaKnown RBP4.65□□□□□ -1.67
TMEM260-209ENST00000556079 YPEL3P61236 119 aaPredicted RBP4.65□□□□□ -1.67
TMEM260-209ENST00000556079 RRAS2P62070 204 aaPredicted RBP4.65□□□□□ -1.67
TMEM260-209ENST00000556079 SRPXP78539 464 aa4.65□□□□□ -1.67
TMEM260-209ENST00000556079 IFITM3Q01628 133 aa4.65□□□□□ -1.67
TMEM260-209ENST00000556079 PSMG4Q5JS54 123 aa4.65□□□□□ -1.67
TMEM260-209ENST00000556079 ACTL10Q5JWF8 245 aa4.65□□□□□ -1.67
TMEM260-209ENST00000556079 SPANXN5Q5MJ07 72 aa4.65□□□□□ -1.67
TMEM260-209ENST00000556079 OR8G2PQ6IF36 304 aa4.65□□□□□ -1.67
TMEM260-209ENST00000556079 ACOT7LQ6ZUV0 252 aa4.65□□□□□ -1.67
TMEM260-209ENST00000556079 TRPT1Q86TN4 253 aaKnown RBP4.65□□□□□ -1.67
TMEM260-209ENST00000556079 OR4D5Q8NGN0 318 aa4.65□□□□□ -1.67
TMEM260-209ENST00000556079 RNF125Q96EQ8 232 aa4.65□□□□□ -1.67
TMEM260-209ENST00000556079 SLC35E1Q96K37 410 aa4.65□□□□□ -1.67
TMEM260-209ENST00000556079 C20orf173Q96LM9 149 aa4.65□□□□□ -1.67
TMEM260-209ENST00000556079 SLC25A21Q9BQT8 299 aaPredicted RBP4.65□□□□□ -1.67
TMEM260-209ENST00000556079 C20orf85Q9H1P6 137 aa4.65□□□□□ -1.67
TMEM260-209ENST00000556079 RCL1Q9Y2P8 373 aaKnown RBP4.65□□□□□ -1.67
TMEM260-209ENST00000556079 SMCO3A2RU48 225 aa4.64□□□□□ -1.67
TMEM260-209ENST00000556079 CXorf65A6NEN9 183 aa4.64□□□□□ -1.67
TMEM260-209ENST00000556079 PMS2P5A8MQ11 134 aa4.64□□□□□ -1.67
TMEM260-209ENST00000556079 FAM90A26D6RGX4 464 aa4.64□□□□□ -1.67
TMEM260-209ENST00000556079 LYRM1O43325 122 aa4.64□□□□□ -1.67
TMEM260-209ENST00000556079 BUB3O43684 328 aa4.64□□□□□ -1.67
TMEM260-209ENST00000556079 SNRPCP09234 159 aaKnown RBP4.64□□□□□ -1.67
TMEM260-209ENST00000556079 METTL15P1P0C7V9 234 aa4.64□□□□□ -1.67
TMEM260-209ENST00000556079 HLA-DMBP28068 263 aa4.64□□□□□ -1.67
TMEM260-209ENST00000556079 APOC4P55056 127 aa4.64□□□□□ -1.67
TMEM260-209ENST00000556079 SIGLEC15Q6ZMC9 328 aa4.64□□□□□ -1.67
TMEM260-209ENST00000556079 ZNF767PQ75MW2 155 aa4.64□□□□□ -1.67
TMEM260-209ENST00000556079 THAP8Q8NA92 274 aa4.64□□□□□ -1.67
TMEM260-209ENST00000556079 ZBTB8BQ8NAP8 495 aaPredicted RBP4.64□□□□□ -1.67
TMEM260-209ENST00000556079 Q8WTZ3 238 aa4.64□□□□□ -1.67
TMEM260-209ENST00000556079 SCRT1Q9BWW7 348 aa4.64□□□□□ -1.67
TMEM260-209ENST00000556079 CSTL1Q9H114 145 aa4.64□□□□□ -1.67
TMEM260-209ENST00000556079 SLC25A32Q9H2D1 315 aa4.64□□□□□ -1.67
TMEM260-209ENST00000556079 GSKIPQ9P0R6 139 aa4.64□□□□□ -1.67
TMEM260-209ENST00000556079 U3KQ87 197 aa4.64□□□□□ -1.67
TMEM260-209ENST00000556079 TRAV30A0A087WSZ9 112 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 DUXBA0A1W2PPF3 345 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 HELTA6NFD8 242 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 NAP1L6A6NFF2 107 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 FAM25EA8MYX2 175 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 SOCS3O14543 225 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 SIX6O95475 246 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 MBPP02686 304 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-209ENST00000556079 TCRBP04435 133 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 PRM2P04554 102 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 ZNF705DP0CH99 300 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-209ENST00000556079 ZNF705BP0CI00 300 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-209ENST00000556079 RBMY1A1P0DJD3 496 aaKnown RBP4.63□□□□□ -1.67
TMEM260-209ENST00000556079 RBMY1CP0DJD4 496 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 SLC25A6P12236 298 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 NKX2-1P43699 371 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-209ENST00000556079 EIF2B2P49770 351 aaKnown RBP4.63□□□□□ -1.67
TMEM260-209ENST00000556079 AKR1C1Q04828 323 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 SLC38A11Q08AI6 406 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 ODF1Q14990 250 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 RBMY1FQ15415 496 aaKnown RBP4.63□□□□□ -1.67
TMEM260-209ENST00000556079 IAH1Q2TAA2 248 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-209ENST00000556079 Q6ZWC4 215 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 RNF182Q8N6D2 247 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 OR11H2Q8NH07 326 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 LINC00052Q96N35 136 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 RAB40CQ96S21 281 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 SLC25A22Q9H936 323 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 NUDT15Q9NV35 164 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 PSENENQ9NZ42 101 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 CELA1Q9UNI1 258 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 TMED3Q9Y3Q3 217 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 X6R8D5 127 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 PKD1P98161 4303 aa4.63□□□□□ -1.67
TMEM260-209ENST00000556079 IGHV4-28A0A0C4DH34 117 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 KIR2DL5BA0A0G2JN68 375 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 KIR2DL5BA0A0G2JPC4 375 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 A0A1W2PS18 150 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 H3BTX0 84 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 LY6G6CO95867 125 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 ORM2P19652 201 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 BMI1P35226 326 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 GPX4P36969 197 aaPredicted RBP4.62□□□□□ -1.67
TMEM260-209ENST00000556079 PAFAH1B2P68402 229 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 MORN5Q5VZ52 161 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 ETFRF1Q6IPR1 90 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 PATE2Q6UY27 113 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 STHQ8IWL8 128 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 KIR2DL5AQ8N109 375 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 Q8NAQ8 132 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 OR1B1Q8NGR6 318 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 KIR2DL5BQ8NHK3 375 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 COQ8AQ8NI60 647 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 MITD1Q8WV92 249 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 LINC00476Q8WZB0 136 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 GRAMD2BQ96HH9 432 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 UHRF2Q96PU4 802 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 TRGV9Q99603 122 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 RARRES2Q99969 163 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 SLC35B3Q9H1N7 401 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms