RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 ATG12O94817 140 aa0.81□□□□□ -2.28
SCFD1-217ENST00000555953 LTC4SQ16873 150 aa0.81□□□□□ -2.28
SCFD1-217ENST00000555953 ESRGQ1W209 222 aa0.81□□□□□ -2.28
SCFD1-217ENST00000555953 RNASE10Q5GAN6 216 aaKnown RBP0.81□□□□□ -2.28
SCFD1-217ENST00000555953 BRMS1LQ5PSV4 323 aa0.81□□□□□ -2.28
SCFD1-217ENST00000555953 SOSTDC1Q6X4U4 206 aa0.81□□□□□ -2.28
SCFD1-217ENST00000555953 Q8IYB0 196 aa0.81□□□□□ -2.28
SCFD1-217ENST00000555953 OR8D4Q8NGM9 314 aa0.81□□□□□ -2.28
SCFD1-217ENST00000555953 TEX47Q8TBZ9 253 aa0.81□□□□□ -2.28
SCFD1-217ENST00000555953 SFT2D1Q8WV19 159 aa0.81□□□□□ -2.28
SCFD1-217ENST00000555953 SLAMF6Q96DU3 332 aa0.81□□□□□ -2.28
SCFD1-217ENST00000555953 LINC00467Q9BRT7 94 aa0.81□□□□□ -2.28
SCFD1-217ENST00000555953 ACER3Q9NUN7 267 aa0.81□□□□□ -2.28
SCFD1-217ENST00000555953 PCTPQ9UKL6 214 aa0.81□□□□□ -2.28
SCFD1-217ENST00000555953 KLK9Q9UKQ9 250 aa0.81□□□□□ -2.28
SCFD1-217ENST00000555953 ASB4Q9Y574 426 aa0.81□□□□□ -2.28
SCFD1-217ENST00000555953 NUP210LQ5VU65 1888 aa0.81□□□□□ -2.28
SCFD1-217ENST00000555953 MYH10P35580 1976 aa0.8□□□□□ -2.28
SCFD1-217ENST00000555953 TMEM256-PLSCR3K7ERE1 68 aa0.8□□□□□ -2.28
SCFD1-217ENST00000555953 K7ERJ3 54 aa0.8□□□□□ -2.28
SCFD1-217ENST00000555953 TAX1BP3O14907 124 aa0.8□□□□□ -2.28
SCFD1-217ENST00000555953 CST8O60676 142 aa0.8□□□□□ -2.28
SCFD1-217ENST00000555953 BANF1O75531 89 aa0.8□□□□□ -2.28
SCFD1-217ENST00000555953 IFNA1P01562 189 aa0.8□□□□□ -2.28
SCFD1-217ENST00000555953 MSMO1Q15800 293 aa0.8□□□□□ -2.28
SCFD1-217ENST00000555953 DEFB113Q30KQ7 82 aa0.8□□□□□ -2.28
SCFD1-217ENST00000555953 LINC00301Q8NCQ3 95 aa0.8□□□□□ -2.28
SCFD1-217ENST00000555953 C14orf132Q9NPU4 83 aa0.8□□□□□ -2.28
SCFD1-217ENST00000555953 MRPL40Q9NQ50 206 aaKnown RBP0.8□□□□□ -2.28
SCFD1-217ENST00000555953 RASL12Q9NYN1 266 aa0.8□□□□□ -2.28
SCFD1-217ENST00000555953 PEAK1Q9H792 1746 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 LOC110117498A0A087WWA1 95 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 TRGV10A0A0A0MS01 117 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 E5RI56 91 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 H0YJX3 145 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 IFNA7P01567 189 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 CXCL1P09341 107 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 SRP14P37108 136 aaKnown RBP0.79□□□□□ -2.28
SCFD1-217ENST00000555953 EIF5AP63241 154 aaKnown RBP0.79□□□□□ -2.28
SCFD1-217ENST00000555953 RRN3P1Q2M238 152 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 DEFB115Q30KQ5 88 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 SLC30A7Q8NEW0 376 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 OR10K1Q8NGX5 313 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 ZNF418Q8TF45 676 aaPredicted RBP0.79□□□□□ -2.28
SCFD1-217ENST00000555953 ODF3Q96PU9 254 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 YPEL2Q96QA6 119 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 MRPL57Q9BQC6 102 aaKnown RBP0.79□□□□□ -2.28
SCFD1-217ENST00000555953 IMUPQ9GZP8 106 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 TMEM126AQ9H061 195 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 PCBD2Q9H0N5 130 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 TAF9BQ9HBM6 251 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 BCL2L10Q9HD36 194 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 SMPXQ9UHP9 88 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 PYCARDQ9ULZ3 195 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 NUP98P52948 1817 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 PLXNA4Q9HCM2 1894 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 MYLKQ15746 1914 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 TNRC6AQ8NDV7 1962 aaKnown RBP0.79□□□□□ -2.28
SCFD1-217ENST00000555953 TNS3Q68CZ2 1445 aa0.79□□□□□ -2.28
SCFD1-217ENST00000555953 TRPM1Q7Z4N2 1603 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 SCN3AQ9NY46 2000 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 TRBV6-8A0A0A6YYG3 113 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 G3V2T6 193 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 H7BYZ3 331 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 GGCTO75223 188 aaKnown RBP0.78□□□□□ -2.28
SCFD1-217ENST00000555953 CRHP06850 196 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 PHBP35232 272 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 DYNLT1P63172 113 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 C1orf137Q5JT78 98 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 BCL2L15Q5TBC7 163 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 TRIQKQ629K1 86 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 C3orf33Q6P1S2 294 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 C22orf39Q6P5X5 142 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 TMED4Q7Z7H5 227 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 STX12Q86Y82 276 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 PDZD9Q8IXQ8 264 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 ST6GALNAC3Q8NDV1 305 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 C4orf3Q8WVX3 66 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 RMND5BQ96G75 393 aaPredicted RBP0.78□□□□□ -2.28
SCFD1-217ENST00000555953 LYSMD1Q96S90 227 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 GPX7Q96SL4 187 aaPredicted RBP0.78□□□□□ -2.28
SCFD1-217ENST00000555953 SELENOSQ9BQE4 189 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 PRADC1Q9BSG0 188 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 RNF11Q9Y3C5 154 aa0.78□□□□□ -2.28
SCFD1-217ENST00000555953 PIK3C2AO00443 1686 aa0.78□□□□□ -2.29
SCFD1-217ENST00000555953 PBRM1Q86U86 1689 aa0.78□□□□□ -2.29
SCFD1-217ENST00000555953 TRBV6-7A0A0A0MS04 114 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 H7C1C5 153 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 M0R2N4 97 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 GPR31O00270 319 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 NDUFB3O43676 98 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 TIMM17BO60830 172 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 GADD45GO95257 159 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 NFYBP25208 207 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 SERPINB1P30740 379 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 LCN6P62502 163 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 UBE2BP63146 152 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 POU6F1Q14863 301 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 HRCT1Q6UXD1 115 aa0.77□□□□□ -2.29
SCFD1-217ENST00000555953 ANGPTL5Q86XS5 388 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms