RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 RHOBP62745 196 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 SLC35B1P78383 322 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 ADIRFQ15847 76 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 PRSS8Q16651 343 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 C10orf55Q5SWW7 151 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 UNQ5815/PRO19632Q6UWF5 114 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 SHISA2Q6UWI4 295 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 TEX45Q8NA69 505 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 ARPC1AQ92747 370 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 RPUSD4Q96CM3 377 aaKnown RBP7.72□□□□□ -1.17
PSEN1-213ENST00000555386 BTF3L4Q96K17 158 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 SLC35E1Q96K37 410 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 CITED2Q99967 270 aaPredicted RBP7.72□□□□□ -1.17
PSEN1-213ENST00000555386 PYGO2Q9BRQ0 406 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 WNT10AQ9GZT5 417 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 ZNF355PQ9NSJ1 428 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 URGCP-MRPS24S4R325 110 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 TEX50A0A1B0GTY4 177 aa7.71□□□□□ -1.18
PSEN1-213ENST00000555386 A0A1W2PN81 502 aa7.71□□□□□ -1.18
PSEN1-213ENST00000555386 CLN5O75503 358 aa7.71□□□□□ -1.18
PSEN1-213ENST00000555386 HOXA5P20719 270 aa7.71□□□□□ -1.18
PSEN1-213ENST00000555386 CHRNA7P36544 502 aa7.71□□□□□ -1.18
PSEN1-213ENST00000555386 MIC13Q5XKP0 118 aa7.71□□□□□ -1.18
PSEN1-213ENST00000555386 ZNF562Q6V9R5 426 aa7.71□□□□□ -1.18
PSEN1-213ENST00000555386 TMEM144Q7Z5S9 345 aa7.71□□□□□ -1.18
PSEN1-213ENST00000555386 IQCF2Q8IXL9 164 aa7.71□□□□□ -1.18
PSEN1-213ENST00000555386 OR5T1Q8NG75 326 aa7.71□□□□□ -1.18
PSEN1-213ENST00000555386 OR4X2Q8NGF9 303 aa7.71□□□□□ -1.18
PSEN1-213ENST00000555386 CACNG8Q8WXS5 425 aa7.71□□□□□ -1.18
PSEN1-213ENST00000555386 OR5B12Q96R08 314 aa7.71□□□□□ -1.18
PSEN1-213ENST00000555386 CITED1Q99966 193 aa7.71□□□□□ -1.18
PSEN1-213ENST00000555386 HINT2Q9BX68 163 aa7.71□□□□□ -1.18
PSEN1-213ENST00000555386 ELOA3CA0A087WX78 387 aaPredicted RBP7.7□□□□□ -1.18
PSEN1-213ENST00000555386 H7BYZ3 331 aa7.7□□□□□ -1.18
PSEN1-213ENST00000555386 PPP1R2P9O14990 202 aa7.7□□□□□ -1.18
PSEN1-213ENST00000555386 PFN1P07737 140 aaKnown RBP7.7□□□□□ -1.18
PSEN1-213ENST00000555386 PF4V1P10720 104 aa7.7□□□□□ -1.18
PSEN1-213ENST00000555386 EGR2P11161 476 aaPredicted RBP7.7□□□□□ -1.18
PSEN1-213ENST00000555386 GPX4P36969 197 aaPredicted RBP7.7□□□□□ -1.18
PSEN1-213ENST00000555386 CDX1P47902 265 aaPredicted RBP7.7□□□□□ -1.18
PSEN1-213ENST00000555386 MRGPRG-AS1Q2M3A8 158 aa7.7□□□□□ -1.18
PSEN1-213ENST00000555386 MMD2Q8IY49 270 aa7.7□□□□□ -1.18
PSEN1-213ENST00000555386 STPG3Q8N7X2 389 aa7.7□□□□□ -1.18
PSEN1-213ENST00000555386 TMEM167AQ8TBQ9 72 aa7.7□□□□□ -1.18
PSEN1-213ENST00000555386 GATAD1Q8WUU5 269 aa7.7□□□□□ -1.18
PSEN1-213ENST00000555386 MS4A10Q96PG2 267 aa7.7□□□□□ -1.18
PSEN1-213ENST00000555386 IMMP2LQ96T52 175 aa7.7□□□□□ -1.18
PSEN1-213ENST00000555386 SRD5A3Q9H8P0 318 aa7.7□□□□□ -1.18
PSEN1-213ENST00000555386 NDUFA4L2Q9NRX3 87 aa7.7□□□□□ -1.18
PSEN1-213ENST00000555386 VWFP04275 2813 aa7.69□□□□□ -1.18
PSEN1-213ENST00000555386 IGF1P05019 195 aa7.69□□□□□ -1.18
PSEN1-213ENST00000555386 ARL14EPLP0DKL9 152 aa7.69□□□□□ -1.18
PSEN1-213ENST00000555386 AREGP15514 252 aa7.69□□□□□ -1.18
PSEN1-213ENST00000555386 RPL27AP46776 148 aaKnown RBP7.69□□□□□ -1.18
PSEN1-213ENST00000555386 RPL8P62917 257 aaKnown RBP7.69□□□□□ -1.18
PSEN1-213ENST00000555386 SSBP2P81877 361 aaPredicted RBP7.69□□□□□ -1.18
PSEN1-213ENST00000555386 ERHP84090 104 aaKnown RBP7.69□□□□□ -1.18
PSEN1-213ENST00000555386 GCSAMLQ5JQS6 135 aa7.69□□□□□ -1.18
PSEN1-213ENST00000555386 TCTEX1D4Q5JR98 221 aa7.69□□□□□ -1.18
PSEN1-213ENST00000555386 C18orf65Q6ZTR6 163 aa7.69□□□□□ -1.18
PSEN1-213ENST00000555386 OR51G1Q8NGK1 321 aa7.69□□□□□ -1.18
PSEN1-213ENST00000555386 SGMS2Q8NHU3 365 aa7.69□□□□□ -1.18
PSEN1-213ENST00000555386 SRSF12Q8WXF0 261 aaKnown RBP7.69□□□□□ -1.18
PSEN1-213ENST00000555386 COMMD5Q9GZQ3 224 aa7.69□□□□□ -1.18
PSEN1-213ENST00000555386 SLC45A2Q9UMX9 530 aa7.69□□□□□ -1.18
PSEN1-213ENST00000555386 E7EUB6 86 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 HIST1H2BKO60814 126 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 TRGC2P03986 189 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 REG1AP05451 166 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 HIST1H2BJP06899 126 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 LINC00869P0C866 280 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 RNASE2P10153 161 aaKnown RBP7.68□□□□□ -1.18
PSEN1-213ENST00000555386 HIST1H2BOP23527 126 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 GCHFRP30047 84 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 HIST1H2BBP33778 126 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 GALR1P47211 349 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 SUB1P53999 127 aaKnown RBP eCLIP7.68□□□□□ -1.18
PSEN1-213ENST00000555386 HIST1H2BDP58876 126 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 HIST1H2BCP62807 126 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 CD69Q07108 199 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 HIST2H2BEQ16778 126 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.68□□□□□ -1.18
PSEN1-213ENST00000555386 CST9LP1Q5W188 147 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 TEX38Q6PEX7 206 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 KCNIP4Q6PIL6 250 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 C19orf35Q6ZS72 473 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 MRPL41Q8IXM3 137 aaKnown RBP7.68□□□□□ -1.18
PSEN1-213ENST00000555386 FAM110DQ8TAY7 271 aaPredicted RBP7.68□□□□□ -1.18
PSEN1-213ENST00000555386 RNASEH2CQ8TDP1 164 aaKnown RBP7.68□□□□□ -1.18
PSEN1-213ENST00000555386 HIST1H2BHQ93079 126 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 C11orf52Q96A22 123 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 RNF2Q99496 336 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 HIST1H2BNQ99877 126 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 HIST1H2BMQ99879 126 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 KLK15Q9H2R5 256 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 LY96Q9Y6Y9 160 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 PKD1L1Q8TDX9 2849 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 PHOX2AO14813 284 aa7.68□□□□□ -1.18
PSEN1-213ENST00000555386 GGCTO75223 188 aaKnown RBP7.68□□□□□ -1.18
PSEN1-213ENST00000555386 TYMSP04818 313 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms