RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 PATE2Q6UY27 113 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 Q6ZRG5 221 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 CYP2G1PQ6ZSU1 146 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 REC114Q7Z4M0 266 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 BPIFCQ8NFQ6 507 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 TRGV9Q99603 122 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 SLC39A9Q9NUM3 307 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 ZMAT5Q9UDW3 170 aaKnown RBP8.34□□□□□ -1.07
SHMT2-218ENST00000555213 UFC1Q9Y3C8 167 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 PXMP4Q9Y6I8 212 aa8.34□□□□□ -1.07
SHMT2-218ENST00000555213 A8MWP6 167 aa8.33□□□□□ -1.08
SHMT2-218ENST00000555213 C17orf112F2Z3M2 114 aa8.33□□□□□ -1.08
SHMT2-218ENST00000555213 NDUFA4O00483 81 aa8.33□□□□□ -1.08
SHMT2-218ENST00000555213 CTSGP08311 255 aa8.33□□□□□ -1.08
SHMT2-218ENST00000555213 ELLP55199 621 aaPredicted RBP8.33□□□□□ -1.08
SHMT2-218ENST00000555213 BLOC1S1P78537 153 aa8.33□□□□□ -1.08
SHMT2-218ENST00000555213 TMEM41BQ5BJD5 291 aa8.33□□□□□ -1.08
SHMT2-218ENST00000555213 DPPA3Q6W0C5 159 aa8.33□□□□□ -1.08
SHMT2-218ENST00000555213 ZNF600Q6ZNG1 722 aa8.33□□□□□ -1.08
SHMT2-218ENST00000555213 STPG3Q8N7X2 389 aa8.33□□□□□ -1.08
SHMT2-218ENST00000555213 FAM213BQ8TBF2 198 aa8.33□□□□□ -1.08
SHMT2-218ENST00000555213 TMEM37Q8WXS4 190 aa8.33□□□□□ -1.08
SHMT2-218ENST00000555213 TMEM190Q8WZ59 177 aa8.33□□□□□ -1.08
SHMT2-218ENST00000555213 CHRDL1Q9BU40 450 aa8.33□□□□□ -1.08
SHMT2-218ENST00000555213 TRAV1-1A0A0B4J248 108 aa8.32□□□□□ -1.08
SHMT2-218ENST00000555213 IGHV3-35A0A0C4DH35 117 aa8.32□□□□□ -1.08
SHMT2-218ENST00000555213 ZFP92A6NM28 416 aa8.32□□□□□ -1.08
SHMT2-218ENST00000555213 M6PRP20645 277 aa8.32□□□□□ -1.08
SHMT2-218ENST00000555213 ADMP35318 185 aa8.32□□□□□ -1.08
SHMT2-218ENST00000555213 B2MP61769 119 aa8.32□□□□□ -1.08
SHMT2-218ENST00000555213 NDUFA5Q16718 116 aa8.32□□□□□ -1.08
SHMT2-218ENST00000555213 TIGITQ495A1 244 aa8.32□□□□□ -1.08
SHMT2-218ENST00000555213 AKR1C8PQ5T2L2 129 aa8.32□□□□□ -1.08
SHMT2-218ENST00000555213 SAMD5Q5TGI4 173 aa8.32□□□□□ -1.08
SHMT2-218ENST00000555213 SPATA31B1PQ5VZV4 182 aa8.32□□□□□ -1.08
SHMT2-218ENST00000555213 ZNF709Q8N972 641 aa8.32□□□□□ -1.08
SHMT2-218ENST00000555213 OR10G4Q8NGN3 311 aa8.32□□□□□ -1.08
SHMT2-218ENST00000555213 OR10G9Q8NGN4 311 aa8.32□□□□□ -1.08
SHMT2-218ENST00000555213 OR10G7Q8NGN6 311 aa8.32□□□□□ -1.08
SHMT2-218ENST00000555213 DYNLRB2Q8TF09 96 aa8.32□□□□□ -1.08
SHMT2-218ENST00000555213 MARC2Q969Z3 335 aa8.32□□□□□ -1.08
SHMT2-218ENST00000555213 C20orf24Q9BUV8 137 aa8.32□□□□□ -1.08
SHMT2-218ENST00000555213 DAZ1Q9NQZ3 744 aaKnown RBP8.32□□□□□ -1.08
SHMT2-218ENST00000555213 BMI1P35226 326 aa8.31□□□□□ -1.08
SHMT2-218ENST00000555213 PLP1P60201 277 aa8.31□□□□□ -1.08
SHMT2-218ENST00000555213 SRSF3P84103 164 aaKnown RBP8.31□□□□□ -1.08
SHMT2-218ENST00000555213 RAB31Q13636 194 aa8.31□□□□□ -1.08
SHMT2-218ENST00000555213 OXLD1Q5BKU9 147 aa8.31□□□□□ -1.08
SHMT2-218ENST00000555213 RAB24Q969Q5 203 aa8.31□□□□□ -1.08
SHMT2-218ENST00000555213 HRH4Q9H3N8 390 aa8.31□□□□□ -1.08
SHMT2-218ENST00000555213 SEPSECSQ9HD40 501 aaKnown RBP8.31□□□□□ -1.08
SHMT2-218ENST00000555213 NOTCH3Q9UM47 2321 aa8.3□□□□□ -1.08
SHMT2-218ENST00000555213 WI2-2373I1.2A0A1W2PRP0 233 aa8.3□□□□□ -1.08
SHMT2-218ENST00000555213 C2orf70A6NJV1 201 aa8.3□□□□□ -1.08
SHMT2-218ENST00000555213 G3V4G9 280 aa8.3□□□□□ -1.08
SHMT2-218ENST00000555213 MBP02144 154 aa8.3□□□□□ -1.08
SHMT2-218ENST00000555213 H2AFB1P0C5Y9 115 aa8.3□□□□□ -1.08
SHMT2-218ENST00000555213 PSG1P11464 419 aa8.3□□□□□ -1.08
SHMT2-218ENST00000555213 YPEL3P61236 119 aaPredicted RBP8.3□□□□□ -1.08
SHMT2-218ENST00000555213 ACOT6Q3I5F7 207 aaPredicted RBP8.3□□□□□ -1.08
SHMT2-218ENST00000555213 MORN5Q5VZ52 161 aa8.3□□□□□ -1.08
SHMT2-218ENST00000555213 FAM122CQ6P4D5 195 aa8.3□□□□□ -1.08
SHMT2-218ENST00000555213 UNQ9165/PRO28630Q6UXU0 137 aa8.3□□□□□ -1.08
SHMT2-218ENST00000555213 COMMD7Q86VX2 200 aa8.3□□□□□ -1.08
SHMT2-218ENST00000555213 EIF4E3Q8N5X7 224 aaKnown RBP8.3□□□□□ -1.08
SHMT2-218ENST00000555213 Q8WTZ3 238 aa8.3□□□□□ -1.08
SHMT2-218ENST00000555213 SFT2D1Q8WV19 159 aa8.3□□□□□ -1.08
SHMT2-218ENST00000555213 NARS2Q96I59 477 aaKnown RBP8.3□□□□□ -1.08
SHMT2-218ENST00000555213 SIGLEC8Q9NYZ4 499 aa8.3□□□□□ -1.08
SHMT2-218ENST00000555213 PUS1Q9Y606 427 aaKnown RBP eCLIP8.3□□□□□ -1.08
SHMT2-218ENST00000555213 VWFP04275 2813 aa8.3□□□□□ -1.08
SHMT2-218ENST00000555213 TMEM213A2RRL7 107 aa8.29□□□□□ -1.08
SHMT2-218ENST00000555213 C9JQL5 133 aa8.29□□□□□ -1.08
SHMT2-218ENST00000555213 K7EMT4 169 aa8.29□□□□□ -1.08
SHMT2-218ENST00000555213 HMGB3O15347 200 aaKnown RBP8.29□□□□□ -1.08
SHMT2-218ENST00000555213 CSN3P07498 182 aa8.29□□□□□ -1.08
SHMT2-218ENST00000555213 RD3LP0DJH9 198 aa8.29□□□□□ -1.08
SHMT2-218ENST00000555213 FOLR2P14207 255 aa8.29□□□□□ -1.08
SHMT2-218ENST00000555213 SELENOTP62341 195 aa8.29□□□□□ -1.08
SHMT2-218ENST00000555213 PMS2P11Q13670 270 aa8.29□□□□□ -1.08
SHMT2-218ENST00000555213 LCN15Q6UWW0 184 aa8.29□□□□□ -1.08
SHMT2-218ENST00000555213 MIR17HGQ75NE6 70 aa8.29□□□□□ -1.08
SHMT2-218ENST00000555213 ZNF503Q96F45 646 aa8.29□□□□□ -1.08
SHMT2-218ENST00000555213 FAM167A-AS1Q96KT0 104 aa8.29□□□□□ -1.08
SHMT2-218ENST00000555213 METTL26Q96S19 204 aa8.29□□□□□ -1.08
SHMT2-218ENST00000555213 ACTR3CQ9C0K3 210 aaPredicted RBP8.29□□□□□ -1.08
SHMT2-218ENST00000555213 TMPRSS5Q9H3S3 457 aa8.29□□□□□ -1.08
SHMT2-218ENST00000555213 DNAJC4Q9NNZ3 241 aa8.29□□□□□ -1.08
SHMT2-218ENST00000555213 TECRQ9NZ01 308 aaKnown RBP8.29□□□□□ -1.08
SHMT2-218ENST00000555213 MRPL27Q9P0M9 148 aaKnown RBP8.29□□□□□ -1.08
SHMT2-218ENST00000555213 IGHV3OR16-8A0A075B7F1 116 aa8.28□□□□□ -1.08
SHMT2-218ENST00000555213 TRAV5A0A0B4J249 113 aa8.28□□□□□ -1.08
SHMT2-218ENST00000555213 CTXND1A0A1B0GTU2 59 aa8.28□□□□□ -1.08
SHMT2-218ENST00000555213 TOMM40O96008 361 aa8.28□□□□□ -1.08
SHMT2-218ENST00000555213 CD5P06127 495 aa8.28□□□□□ -1.08
SHMT2-218ENST00000555213 OR5G3P0C626 314 aa8.28□□□□□ -1.08
SHMT2-218ENST00000555213 STAG3L2P0CL84 134 aa8.28□□□□□ -1.08
SHMT2-218ENST00000555213 STAG3L3P0CL85 134 aa8.28□□□□□ -1.08
SHMT2-218ENST00000555213 CBLN1P23435 193 aa8.28□□□□□ -1.08
SHMT2-218ENST00000555213 FGF8P55075 233 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms