RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 TMEM190Q8WZ59 177 aa11.04□□□□□ -0.64
SHOX2-206ENST00000554685 RCC1LQ96I51 464 aaKnown RBP11.04□□□□□ -0.64
SHOX2-206ENST00000554685 MRPL27Q9P0M9 148 aaKnown RBP11.04□□□□□ -0.64
SHOX2-206ENST00000554685 UFC1Q9Y3C8 167 aa11.04□□□□□ -0.64
SHOX2-206ENST00000554685 A0A1W2PRX2 142 aa11.03□□□□□ -0.64
SHOX2-206ENST00000554685 LGALS9O00182 355 aa11.03□□□□□ -0.64
SHOX2-206ENST00000554685 H2AFB1P0C5Y9 115 aa11.03□□□□□ -0.64
SHOX2-206ENST00000554685 NPPCP23582 126 aa11.03□□□□□ -0.64
SHOX2-206ENST00000554685 BMI1P35226 326 aa11.03□□□□□ -0.64
SHOX2-206ENST00000554685 USF2Q15853 346 aaPredicted RBP11.03□□□□□ -0.64
SHOX2-206ENST00000554685 KHDC3LQ587J8 217 aa11.03□□□□□ -0.64
SHOX2-206ENST00000554685 CLLU1Q5K131 121 aa11.03□□□□□ -0.64
SHOX2-206ENST00000554685 PATE2Q6UY27 113 aa11.03□□□□□ -0.64
SHOX2-206ENST00000554685 C8orf86Q6ZUL3 223 aa11.03□□□□□ -0.64
SHOX2-206ENST00000554685 LINC00305Q7Z4B0 112 aa11.03□□□□□ -0.64
SHOX2-206ENST00000554685 REC114Q7Z4M0 266 aa11.03□□□□□ -0.64
SHOX2-206ENST00000554685 C1QL4Q86Z23 238 aa11.03□□□□□ -0.64
SHOX2-206ENST00000554685 STXBP6Q8NFX7 210 aa11.03□□□□□ -0.64
SHOX2-206ENST00000554685 OR11H1Q8NG94 326 aa11.03□□□□□ -0.64
SHOX2-206ENST00000554685 RAB24Q969Q5 203 aa11.03□□□□□ -0.64
SHOX2-206ENST00000554685 C20orf24Q9BUV8 137 aa11.03□□□□□ -0.64
SHOX2-206ENST00000554685 SLC25A22Q9H936 323 aa11.03□□□□□ -0.64
SHOX2-206ENST00000554685 TECRQ9NZ01 308 aaKnown RBP11.03□□□□□ -0.64
SHOX2-206ENST00000554685 NF1P21359 2839 aa11.03□□□□□ -0.64
SHOX2-206ENST00000554685 NIPBLQ6KC79 2804 aaeCLIP11.02□□□□□ -0.65
SHOX2-206ENST00000554685 C2CD3Q4AC94 2353 aa11.02□□□□□ -0.65
SHOX2-206ENST00000554685 ZNF320A2RRD8 509 aa11.02□□□□□ -0.65
SHOX2-206ENST00000554685 MAP1LC3B2A6NCE7 125 aa11.02□□□□□ -0.65
SHOX2-206ENST00000554685 H3BRN7 92 aa11.02□□□□□ -0.65
SHOX2-206ENST00000554685 K7EMT4 169 aa11.02□□□□□ -0.65
SHOX2-206ENST00000554685 C8orf88P0DMB2 117 aa11.02□□□□□ -0.65
SHOX2-206ENST00000554685 HOXD3P31249 432 aaPredicted RBP11.02□□□□□ -0.65
SHOX2-206ENST00000554685 FHITP49789 147 aa11.02□□□□□ -0.65
SHOX2-206ENST00000554685 PQLC2Q6ZP29 291 aa11.02□□□□□ -0.65
SHOX2-206ENST00000554685 C18orf65Q6ZTR6 163 aa11.02□□□□□ -0.65
SHOX2-206ENST00000554685 MBD3L1Q8WWY6 194 aa11.02□□□□□ -0.65
SHOX2-206ENST00000554685 SHANK2-AS3Q9BTD1 123 aa11.02□□□□□ -0.65
SHOX2-206ENST00000554685 SLC25A39Q9BZJ4 359 aaPredicted RBP11.02□□□□□ -0.65
SHOX2-206ENST00000554685 MAP1LC3BQ9GZQ8 125 aa11.02□□□□□ -0.65
SHOX2-206ENST00000554685 DAZ1Q9NQZ3 744 aaKnown RBP11.02□□□□□ -0.65
SHOX2-206ENST00000554685 TRAV1-1A0A0B4J248 108 aa11.01□□□□□ -0.65
SHOX2-206ENST00000554685 A0A1W2PS18 150 aa11.01□□□□□ -0.65
SHOX2-206ENST00000554685 CCL24O00175 119 aa11.01□□□□□ -0.65
SHOX2-206ENST00000554685 CXorf1O96002 111 aa11.01□□□□□ -0.65
SHOX2-206ENST00000554685 NMBP08949 121 aa11.01□□□□□ -0.65
SHOX2-206ENST00000554685 STAG3L2P0CL84 134 aa11.01□□□□□ -0.65
SHOX2-206ENST00000554685 STAG3L3P0CL85 134 aa11.01□□□□□ -0.65
SHOX2-206ENST00000554685 CRYBB3P26998 211 aa11.01□□□□□ -0.65
SHOX2-206ENST00000554685 MYCNOSP40205 109 aa11.01□□□□□ -0.65
SHOX2-206ENST00000554685 KLF5Q13887 457 aaPredicted RBP11.01□□□□□ -0.65
SHOX2-206ENST00000554685 DEFB136Q30KP8 78 aa11.01□□□□□ -0.65
SHOX2-206ENST00000554685 NSUN5P1Q3KNT7 163 aa11.01□□□□□ -0.65
SHOX2-206ENST00000554685 C1orf194Q5T5A4 169 aa11.01□□□□□ -0.65
SHOX2-206ENST00000554685 SFT2D1Q8WV19 159 aa11.01□□□□□ -0.65
SHOX2-206ENST00000554685 GRAMD2BQ96HH9 432 aa11.01□□□□□ -0.65
SHOX2-206ENST00000554685 ZNF414Q96IQ9 312 aa11.01□□□□□ -0.65
SHOX2-206ENST00000554685 CITED1Q99966 193 aa11.01□□□□□ -0.65
SHOX2-206ENST00000554685 TMEM231Q9H6L2 316 aa11.01□□□□□ -0.65
SHOX2-206ENST00000554685 SEPSECSQ9HD40 501 aaKnown RBP11.01□□□□□ -0.65
SHOX2-206ENST00000554685 PEMTQ9UBM1 199 aa11.01□□□□□ -0.65
SHOX2-206ENST00000554685 CUBNO60494 3623 aa11.01□□□□□ -0.65
SHOX2-206ENST00000554685 TEP1Q99973 2627 aaKnown RBP11□□□□□ -0.65
SHOX2-206ENST00000554685 A8MWP6 167 aa11□□□□□ -0.65
SHOX2-206ENST00000554685 KRTAP10-3P60369 221 aa11□□□□□ -0.65
SHOX2-206ENST00000554685 FHL3Q13643 280 aa11□□□□□ -0.65
SHOX2-206ENST00000554685 ZNF726P1Q15940 193 aa11□□□□□ -0.65
SHOX2-206ENST00000554685 LCN15Q6UWW0 184 aa11□□□□□ -0.65
SHOX2-206ENST00000554685 UNQ9165/PRO28630Q6UXU0 137 aa11□□□□□ -0.65
SHOX2-206ENST00000554685 MIR17HGQ75NE6 70 aa11□□□□□ -0.65
SHOX2-206ENST00000554685 LURAP1LQ8IV03 231 aa11□□□□□ -0.65
SHOX2-206ENST00000554685 RAX2Q96IS3 184 aa11□□□□□ -0.65
SHOX2-206ENST00000554685 GPR82Q96P67 336 aa11□□□□□ -0.65
SHOX2-206ENST00000554685 UHRF2Q96PU4 802 aa11□□□□□ -0.65
SHOX2-206ENST00000554685 ZNF98A6NK75 572 aa10.99□□□□□ -0.65
SHOX2-206ENST00000554685 ADARB2-AS1A8MUL3 147 aa10.99□□□□□ -0.65
SHOX2-206ENST00000554685 M0QZ24 198 aa10.99□□□□□ -0.65
SHOX2-206ENST00000554685 OR7C2O60412 319 aa10.99□□□□□ -0.65
SHOX2-206ENST00000554685 PPT1P50897 306 aa10.99□□□□□ -0.65
SHOX2-206ENST00000554685 SLURP1P55000 103 aa10.99□□□□□ -0.65
SHOX2-206ENST00000554685 SYNJ2BPP57105 145 aa10.99□□□□□ -0.65
SHOX2-206ENST00000554685 SPATA31B1PQ5VZV4 182 aa10.99□□□□□ -0.65
SHOX2-206ENST00000554685 C12orf54Q6X4T0 127 aa10.99□□□□□ -0.65
SHOX2-206ENST00000554685 BPIFA4PQ86YQ2 179 aa10.99□□□□□ -0.65
SHOX2-206ENST00000554685 OR4F17Q8NGA8 305 aa10.99□□□□□ -0.65
SHOX2-206ENST00000554685 MARC2Q969Z3 335 aa10.99□□□□□ -0.65
SHOX2-206ENST00000554685 OR4F4Q96R69 305 aa10.99□□□□□ -0.65
SHOX2-206ENST00000554685 IGHV3OR16-8A0A075B7F1 116 aa10.98□□□□□ -0.65
SHOX2-206ENST00000554685 RPL7P18124 248 aaKnown RBP10.98□□□□□ -0.65
SHOX2-206ENST00000554685 PSMB3P49720 205 aa10.98□□□□□ -0.65
SHOX2-206ENST00000554685 IL34Q6ZMJ4 242 aa10.98□□□□□ -0.65
SHOX2-206ENST00000554685 LYPD6BQ8NI32 183 aa10.98□□□□□ -0.65
SHOX2-206ENST00000554685 ZNF747Q9BV97 191 aa10.98□□□□□ -0.65
SHOX2-206ENST00000554685 ELOVL1Q9BW60 279 aa10.98□□□□□ -0.65
SHOX2-206ENST00000554685 SCRT1Q9BWW7 348 aa10.98□□□□□ -0.65
SHOX2-206ENST00000554685 HRH4Q9H3N8 390 aa10.98□□□□□ -0.65
SHOX2-206ENST00000554685 TMEM167BQ9NRX6 74 aa10.98□□□□□ -0.65
SHOX2-206ENST00000554685 TMEM14CQ9P0S9 112 aa10.98□□□□□ -0.65
SHOX2-206ENST00000554685 U3KQE9 123 aa10.98□□□□□ -0.65
SHOX2-206ENST00000554685 JMJD1CQ15652 2540 aa10.98□□□□□ -0.65
SHOX2-206ENST00000554685 IGHV7-4-1A0A0J9YVY3 117 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms