RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 IGHG4P01861 327 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 HSPB1P04792 205 aaKnown RBP4.48□□□□□ -1.69
ATXN3-230ENST00000554673 IGF1P05019 195 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 CTSGP08311 255 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 SNRPCP09234 159 aaKnown RBP4.48□□□□□ -1.69
ATXN3-230ENST00000554673 ICAM4Q14773 271 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 USF2Q15853 346 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-230ENST00000554673 GUCA2BQ16661 112 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 ECSCRQ19T08 205 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 FFAR4Q5NUL3 377 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 ZNF343Q6P1L6 599 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 ADAMTSL5Q6ZMM2 481 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 TCF24Q7RTU0 167 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 EIF4E3Q8N5X7 224 aaKnown RBP4.48□□□□□ -1.69
ATXN3-230ENST00000554673 BPIFCQ8NFQ6 507 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 OR10P1Q8NGE3 313 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 VSTM2AQ8TAG5 236 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 FAM213BQ8TBF2 198 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 ZNF502Q8TBZ5 544 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 UHRF2Q96PU4 802 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 CIB3Q96Q77 187 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-230ENST00000554673 SLC25A2Q9BXI2 301 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 ZC4H2Q9NQZ6 224 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 PARP11Q9NR21 331 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 YTHDF2Q9Y5A9 579 aaKnown RBP4.48□□□□□ -1.69
ATXN3-230ENST00000554673 TIMM9Q9Y5J7 89 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 SELENOKQ9Y6D0 94 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 PXMP4Q9Y6I8 212 aa4.48□□□□□ -1.69
ATXN3-230ENST00000554673 C2CD3Q4AC94 2353 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 TRAV1-1A0A0B4J248 108 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 A0A1W2PPQ1 181 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 WI2-2373I1.2A0A1W2PRP0 233 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 NCBP2LA6PVI3 153 aaKnown RBP4.47□□□□□ -1.69
ATXN3-230ENST00000554673 ZNF705EA8MWA4 302 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-230ENST00000554673 ATG12O94817 140 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 IFNA7P01567 189 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 APOHP02749 345 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-230ENST00000554673 IFNA4P05014 189 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 SRP19P09132 144 aaKnown RBP4.47□□□□□ -1.69
ATXN3-230ENST00000554673 OR5G3P0C626 314 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 PVALBP20472 110 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-230ENST00000554673 SNCAP37840 140 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 OPRK1P41145 380 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 LBHQ53QV2 105 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-230ENST00000554673 C10orf91Q5T1B1 145 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 LEMD1Q68G75 181 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 FAM122CQ6P4D5 195 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 LCN15Q6UWW0 184 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 CYP2G1PQ6ZSU1 146 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 Q6ZSV7 163 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 HSD17B13Q7Z5P4 300 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-230ENST00000554673 STX12Q86Y82 276 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 SUN5Q8TC36 379 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 RNASEH2CQ8TDP1 164 aaKnown RBP4.47□□□□□ -1.69
ATXN3-230ENST00000554673 PINX1Q96BK5 328 aaKnown RBP4.47□□□□□ -1.69
ATXN3-230ENST00000554673 ACY3Q96HD9 319 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 SRD5A3Q9H8P0 318 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 GNB4Q9HAV0 340 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 ZFP57Q9NU63 452 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 SLC39A9Q9NUM3 307 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 SMAD5-AS1Q9Y6J3 95 aa4.47□□□□□ -1.69
ATXN3-230ENST00000554673 TRBV20OR9-2A0A075B6H5 130 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 IGHV3-35A0A0C4DH35 117 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 A0A1W2PN81 502 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 TCRBV4S1A1TA0A5B7 111 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 INAFM1C9JVW0 142 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 PPP5D1E7EU14 171 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 H3BQ15 152 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 BMPR1BO00238 502 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 NDUFB4O95168 129 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 FAM106CPP0CH98 169 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 PYYP10082 97 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 PSG1P11464 419 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 CHRNA7P36544 502 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 GPX4P36969 197 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-230ENST00000554673 MYCNOSP40205 109 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 RPL29P47914 159 aaKnown RBP4.46□□□□□ -1.7
ATXN3-230ENST00000554673 ATP5G3P48201 142 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 CD81P60033 236 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 PLP1P60201 277 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 RHOGP84095 191 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 ATP6V1FQ16864 119 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 MAJINQ3KP22 176 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 TMEM41BQ5BJD5 291 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 UNQ5815/PRO19632Q6UWF5 114 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 UNQ9165/PRO28630Q6UXU0 137 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 SPNS3Q6ZMD2 512 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 ZNF329Q86UD4 541 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 GPHB5Q86YW7 130 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 ZNF491Q8N8L2 437 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 OR4X1Q8NH49 305 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 TRGV9Q99603 122 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 GGACTQ9BVM4 153 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 YAE1D1Q9NRH1 226 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 FKBP11Q9NYL4 201 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 C1RLQ9NZP8 487 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 MRPL27Q9P0M9 148 aaKnown RBP4.46□□□□□ -1.7
ATXN3-230ENST00000554673 DOK5Q9P104 306 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 ZNF580Q9UK33 172 aa4.46□□□□□ -1.7
ATXN3-230ENST00000554673 VPREB3Q9UKI3 123 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms