RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 OR2A7Q96R45 310 aa3.45□□□□□ -1.86
ATXN3-228ENST00000554592 ATP6V0BQ99437 205 aa3.45□□□□□ -1.86
ATXN3-228ENST00000554592 RNF2Q99496 336 aa3.45□□□□□ -1.86
ATXN3-228ENST00000554592 CMSS1Q9BQ75 279 aaKnown RBP3.45□□□□□ -1.86
ATXN3-228ENST00000554592 NICN1Q9BSH3 213 aa3.45□□□□□ -1.86
ATXN3-228ENST00000554592 HDHD3Q9BSH5 251 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-228ENST00000554592 C20orf24Q9BUV8 137 aa3.45□□□□□ -1.86
ATXN3-228ENST00000554592 RHPN1-AS1Q9BWJ2 59 aa3.45□□□□□ -1.86
ATXN3-228ENST00000554592 MIXL1Q9H2W2 232 aa3.45□□□□□ -1.86
ATXN3-228ENST00000554592 RNF167Q9H6Y7 350 aa3.45□□□□□ -1.86
ATXN3-228ENST00000554592 C12orf4Q9NQ89 552 aa3.45□□□□□ -1.86
ATXN3-228ENST00000554592 PRELID3BQ9Y3B1 194 aa3.45□□□□□ -1.86
ATXN3-228ENST00000554592 ETV7Q9Y603 341 aa3.45□□□□□ -1.86
ATXN3-228ENST00000554592 DNAH5Q8TE73 4624 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 A0A0A6YYD4 124 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 IGHV7-4-1A0A0J9YVY3 117 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 A0A1B0GW64 132 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 C7orf66A4D0T2 115 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 TMEM14DPA8MWL7 114 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 INMT-MINDY4F8WBC2 141 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 CHEK1O14757 476 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 BET1O15155 118 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 PLA2G10O15496 165 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 SOCS1O15524 211 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 CYB5BO43169 146 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 GSTZ1O43708 216 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-228ENST00000554592 KBTBD11O94819 623 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 GIG44P09565 113 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-228ENST00000554592 CD3GP09693 182 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 UCHL1P09936 223 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 CD37P11049 281 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 TMEM50BP56557 158 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 AP3S2P59780 193 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 RPL8P62917 257 aaKnown RBP3.44□□□□□ -1.86
ATXN3-228ENST00000554592 MRPS10P82664 201 aaKnown RBP3.44□□□□□ -1.86
ATXN3-228ENST00000554592 QRFPP83859 136 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 UNC119Q13432 240 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 LRRC37A5PQ49AS3 106 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 ACSM3Q53FZ2 586 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 SFXN4Q6P4A7 337 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 MORN3Q6PF18 240 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-228ENST00000554592 CNIH2Q6PI25 160 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 STHQ8IWL8 128 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 SLC7A5P1Q8MH63 180 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 VKORC1L1Q8N0U8 176 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 PUSL1Q8N0Z8 303 aaKnown RBP3.44□□□□□ -1.86
ATXN3-228ENST00000554592 GIMAP1Q8WWP7 306 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 ASB13Q8WXK3 278 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 CABLES2Q9BTV7 478 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 LPAR5Q9H1C0 372 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 MCUBQ9NWR8 336 aa3.44□□□□□ -1.86
ATXN3-228ENST00000554592 MRPS7Q9Y2R9 242 aaKnown RBP3.44□□□□□ -1.86
ATXN3-228ENST00000554592 IGKV3-7A0A075B6H7 116 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 TRAV14DV4A0A0A6YYC5 116 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 LINC00862A6NCI5 91 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 OR2T8A6NH00 312 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 FOXI3A8MTJ6 420 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-228ENST00000554592 DNASE2O00115 360 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-228ENST00000554592 ZNF207O43670 478 aaKnown RBP3.43□□□□□ -1.86
ATXN3-228ENST00000554592 SLC22A5O76082 557 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 HRASP01112 189 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 REG1AP05451 166 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 HLA-GP17693 338 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 AP2S1P53680 142 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-228ENST00000554592 DEFB131AP59861 70 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 IL18Q14116 193 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 SLC25A24Q6NUK1 477 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 TMEM91Q6ZNR0 172 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 ARHGAP5-AS1Q96IT6 56 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 GINS4Q9BRT9 223 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 SCRT1Q9BWW7 348 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 PECRQ9BY49 303 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 MED28Q9H204 178 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 TMEM14BQ9NUH8 114 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 C21orf62Q9NYP8 219 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 COMMD3Q9UBI1 195 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 CACNG5Q9UF02 275 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 ALG5Q9Y673 324 aa3.43□□□□□ -1.86
ATXN3-228ENST00000554592 APOBP04114 4563 aaKnown RBP3.42□□□□□ -1.86
ATXN3-228ENST00000554592 IGHV3OR16-8A0A075B7F1 116 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 TRAV2A0A0B4J234 112 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 HPGDSO60760 199 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 CLN5O75503 358 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 YIF1AO95070 293 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 IFNA7P01567 189 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 CTSGP08311 255 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 SPART-AS1P0CW21 52 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 ANXA3P12429 323 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 OR2B8PP59922 312 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 RPL30P62888 115 aaKnown RBP3.42□□□□□ -1.86
ATXN3-228ENST00000554592 SSBP1Q04837 148 aaKnown RBP3.42□□□□□ -1.86
ATXN3-228ENST00000554592 INSL4Q14641 139 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 P2RY14Q15391 338 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 UBE2NLQ5JXB2 153 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 IDNKQ5T6J7 187 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 LEMD1Q68G75 181 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 TCF24Q7RTU0 167 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 HSD17B13Q7Z5P4 300 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-228ENST00000554592 SPATA12Q7Z6I5 190 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 LRRTM1Q86UE6 522 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms