RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 ESDP10768 282 aa12.52□□□□□ -0.4
ARHGEF40-203ENST00000554514 GDF5OSQ5U4N7 250 aa12.52□□□□□ -0.4
ARHGEF40-203ENST00000554514 ASCL2Q99929 193 aa12.52□□□□□ -0.4
ARHGEF40-203ENST00000554514 HILPDAQ9Y5L2 63 aa12.52□□□□□ -0.4
ARHGEF40-203ENST00000554514 DIRC3C9JPN6 131 aa12.52□□□□□ -0.41
ARHGEF40-203ENST00000554514 BATFQ16520 125 aa12.52□□□□□ -0.41
ARHGEF40-203ENST00000554514 TRAV8-1A0A0A6YYK1 113 aa12.51□□□□□ -0.41
ARHGEF40-203ENST00000554514 IGLV1-47P01700 117 aa12.51□□□□□ -0.41
ARHGEF40-203ENST00000554514 OR2D3Q8NGH3 330 aa12.51□□□□□ -0.41
ARHGEF40-203ENST00000554514 GRAMD2BQ96HH9 432 aa12.51□□□□□ -0.41
ARHGEF40-203ENST00000554514 TMEM183BQ1AE95 376 aa12.51□□□□□ -0.41
ARHGEF40-203ENST00000554514 LINC00322Q6ZN03 302 aaPredicted RBP12.51□□□□□ -0.41
ARHGEF40-203ENST00000554514 KIR3DL3Q8N743 410 aa12.51□□□□□ -0.41
ARHGEF40-203ENST00000554514 SRSF12Q8WXF0 261 aaKnown RBP12.51□□□□□ -0.41
ARHGEF40-203ENST00000554514 MED13LQ71F56 2210 aa12.51□□□□□ -0.41
ARHGEF40-203ENST00000554514 M0R143 59 aa12.51□□□□□ -0.41
ARHGEF40-203ENST00000554514 PSG1P11464 419 aa12.51□□□□□ -0.41
ARHGEF40-203ENST00000554514 OR10J3Q5JRS4 329 aa12.51□□□□□ -0.41
ARHGEF40-203ENST00000554514 ATOH7Q8N100 152 aa12.51□□□□□ -0.41
ARHGEF40-203ENST00000554514 TRGV9Q99603 122 aa12.51□□□□□ -0.41
ARHGEF40-203ENST00000554514 Q9H3A6 140 aa12.51□□□□□ -0.41
ARHGEF40-203ENST00000554514 TEX22C9J3V5 150 aa12.5□□□□□ -0.41
ARHGEF40-203ENST00000554514 CRYGCP07315 174 aa12.5□□□□□ -0.41
ARHGEF40-203ENST00000554514 TEX43Q6ZNM6 134 aa12.5□□□□□ -0.41
ARHGEF40-203ENST00000554514 Q71RC1 249 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF40-203ENST00000554514 WNT10AQ9GZT5 417 aa12.5□□□□□ -0.41
ARHGEF40-203ENST00000554514 F11RQ9Y624 299 aaKnown RBP12.5□□□□□ -0.41
ARHGEF40-203ENST00000554514 COL6A6A6NMZ7 2263 aa12.5□□□□□ -0.41
ARHGEF40-203ENST00000554514 SIAH2O43255 324 aa12.5□□□□□ -0.41
ARHGEF40-203ENST00000554514 HIST1H1EP10412 219 aaKnown RBP12.5□□□□□ -0.41
ARHGEF40-203ENST00000554514 ARF6P62330 175 aa12.5□□□□□ -0.41
ARHGEF40-203ENST00000554514 MMDQ15546 238 aa12.5□□□□□ -0.41
ARHGEF40-203ENST00000554514 EXOC3-AS1Q8N2X6 119 aa12.5□□□□□ -0.41
ARHGEF40-203ENST00000554514 TSKUQ8WUA8 353 aa12.5□□□□□ -0.41
ARHGEF40-203ENST00000554514 HIGD1AQ9Y241 93 aa12.5□□□□□ -0.41
ARHGEF40-203ENST00000554514 ZNF324O75467 553 aaPredicted RBP12.49□□□□□ -0.41
ARHGEF40-203ENST00000554514 CRYGBP07316 175 aa12.49□□□□□ -0.41
ARHGEF40-203ENST00000554514 MYCNOSP40205 109 aa12.49□□□□□ -0.41
ARHGEF40-203ENST00000554514 TMEM116Q8NCL8 245 aa12.49□□□□□ -0.41
ARHGEF40-203ENST00000554514 STXBP6Q8NFX7 210 aa12.49□□□□□ -0.41
ARHGEF40-203ENST00000554514 C18orf32Q8TCD1 76 aa12.49□□□□□ -0.41
ARHGEF40-203ENST00000554514 MBD6Q96DN6 1003 aa12.49□□□□□ -0.41
ARHGEF40-203ENST00000554514 VWC2LB2RUY7 222 aa12.49□□□□□ -0.41
ARHGEF40-203ENST00000554514 TIMM23O14925 209 aa12.49□□□□□ -0.41
ARHGEF40-203ENST00000554514 GP9P14770 177 aa12.49□□□□□ -0.41
ARHGEF40-203ENST00000554514 NBL1P41271 181 aa12.49□□□□□ -0.41
ARHGEF40-203ENST00000554514 ZNF672Q499Z4 452 aaPredicted RBP12.49□□□□□ -0.41
ARHGEF40-203ENST00000554514 COX19Q49B96 90 aa12.49□□□□□ -0.41
ARHGEF40-203ENST00000554514 LBHQ53QV2 105 aaPredicted RBP12.49□□□□□ -0.41
ARHGEF40-203ENST00000554514 RNASEKQ6P5S7 137 aaKnown RBP12.49□□□□□ -0.41
ARHGEF40-203ENST00000554514 VKORC1Q9BQB6 163 aa12.49□□□□□ -0.41
ARHGEF40-203ENST00000554514 A6NNC1 897 aa12.48□□□□□ -0.41
ARHGEF40-203ENST00000554514 KLRD1Q13241 179 aa12.48□□□□□ -0.41
ARHGEF40-203ENST00000554514 KLF17Q5JT82 389 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF40-203ENST00000554514 LDLRAD2Q5SZI1 272 aa12.48□□□□□ -0.41
ARHGEF40-203ENST00000554514 PGLYRP4Q96LB8 373 aa12.48□□□□□ -0.41
ARHGEF40-203ENST00000554514 NUTF2P61970 127 aaKnown RBP12.48□□□□□ -0.41
ARHGEF40-203ENST00000554514 FAM231DQ6ZW35 169 aa12.48□□□□□ -0.41
ARHGEF40-203ENST00000554514 C8orf46Q8TAG6 207 aa12.48□□□□□ -0.41
ARHGEF40-203ENST00000554514 GPR82Q96P67 336 aa12.48□□□□□ -0.41
ARHGEF40-203ENST00000554514 RASL11BQ9BPW5 248 aa12.48□□□□□ -0.41
ARHGEF40-203ENST00000554514 WNK2Q9Y3S1 2297 aa12.48□□□□□ -0.41
ARHGEF40-203ENST00000554514 CDSNQ15517 529 aa12.48□□□□□ -0.41
ARHGEF40-203ENST00000554514 K7ENP7 123 aa12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 M0QZ24 198 aa12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 C3orf79P0CE67 100 aa12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 FOXA3P55318 350 aaPredicted RBP12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 HES1Q14469 280 aa12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 LCN12Q6JVE5 192 aa12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 SSX8Q7RTT4 187 aa12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 BORCS7Q96B45 105 aa12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 C7orf69Q9H7B7 122 aa12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 CCL21O00585 134 aa12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 P01737 135 aa12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 TCRAP04437 139 aa12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 IGLC1P0CG04 106 aa12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 GOLT1AQ6ZVE7 132 aa12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 PRNTQ86SH4 94 aa12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 NIT1Q86X76 327 aa12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 CIARTQ8N365 385 aaPredicted RBP12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 C5orf17Q8NAS9 161 aa12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 OR8B3Q8NGG8 313 aa12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 TNFRSF14Q92956 283 aa12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 DAZAP1Q96EP5 407 aaKnown RBP12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 OR8B2Q96RD0 313 aa12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 ASH1LQ9NR48 2969 aaKnown RBP12.47□□□□□ -0.41
ARHGEF40-203ENST00000554514 HSBP1O75506 76 aa12.46□□□□□ -0.41
ARHGEF40-203ENST00000554514 Q8N976 141 aa12.46□□□□□ -0.41
ARHGEF40-203ENST00000554514 C17orf77Q96MU5 243 aa12.46□□□□□ -0.41
ARHGEF40-203ENST00000554514 MIEN1Q9BRT3 115 aa12.46□□□□□ -0.41
ARHGEF40-203ENST00000554514 SLC25A39Q9BZJ4 359 aaPredicted RBP12.46□□□□□ -0.41
ARHGEF40-203ENST00000554514 RPP21Q9H633 154 aaKnown RBP12.46□□□□□ -0.42
ARHGEF40-203ENST00000554514 RAB4AP20338 218 aa12.45□□□□□ -0.42
ARHGEF40-203ENST00000554514 PMCHL1Q16048 86 aa12.45□□□□□ -0.42
ARHGEF40-203ENST00000554514 SPATA45Q537H7 98 aa12.45□□□□□ -0.42
ARHGEF40-203ENST00000554514 SPTBN1Q01082 2364 aaKnown RBP12.45□□□□□ -0.42
ARHGEF40-203ENST00000554514 FBLN7Q53RD9 439 aa12.45□□□□□ -0.42
ARHGEF40-203ENST00000554514 M0R2Z0 102 aa12.44□□□□□ -0.42
ARHGEF40-203ENST00000554514 GTSF1Q8WW33 167 aa12.44□□□□□ -0.42
ARHGEF40-203ENST00000554514 C20orf144Q9BQM9 153 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms