RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 SPATA12Q7Z6I5 190 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 MEX3DQ86XN8 651 aaKnown RBP3.54□□□□□ -1.84
ATXN3-227ENST00000554491 BAGE3Q86Y29 109 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 BAGE2Q86Y30 109 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 ZGRF1Q86YA3 2104 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 CLDN19Q8N6F1 224 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 OR4X2Q8NGF9 303 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 OR51H1Q8NH63 302 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 NEURL3Q96EH8 262 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 ADAT3Q96EY9 351 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-227ENST00000554491 TIMD4Q96H15 378 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 KIR2DL4Q99706 377 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 ATP5SQ99766 215 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 RETNQ9HD89 108 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 CMC2Q9NRP2 79 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 TVP23BQ9NYZ1 205 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 TECRQ9NZ01 308 aaKnown RBP3.54□□□□□ -1.84
ATXN3-227ENST00000554491 CISD1Q9NZ45 108 aaKnown RBP3.54□□□□□ -1.84
ATXN3-227ENST00000554491 RCL1Q9Y2P8 373 aaKnown RBP3.54□□□□□ -1.84
ATXN3-227ENST00000554491 FER1L5A0AVI2 2057 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 NSG1A0A0A6YYJ2 146 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 A0A1B0GV50 99 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 LRRC30A6NM36 301 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 RIIAD1A6NNX1 92 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 LMO7DNF2Z398 122 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 SYS1-DBNDD2H3BUS1 97 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 SERF1AO75920 110 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 NKX2-2O95096 273 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 NDUFC2O95298 119 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 NCR2O95944 276 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 NAPSAO96009 420 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 LGALS1P09382 135 aaKnown RBP3.53□□□□□ -1.84
ATXN3-227ENST00000554491 H2BFMP0C1H6 154 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 RFPL3SP0C7P2 107 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 C3orf79P0CE67 100 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 KLK2P20151 261 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 MDKP21741 143 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-227ENST00000554491 LOXP28300 417 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-227ENST00000554491 OPRK1P41145 380 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 APOBEC1P41238 236 aaKnown RBP3.53□□□□□ -1.84
ATXN3-227ENST00000554491 KRTAP10-5P60370 271 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 HERVK_113P63121 156 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 SLC38A11Q08AI6 406 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 CLEC12BQ2HXU8 276 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 ANXA2RQ3ZCQ2 193 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 ZNF542PQ5EBM4 170 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 SLC35E4Q6ICL7 350 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 HRCT1Q6UXD1 115 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 CYP2G1PQ6ZSU1 146 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 RFLNAQ6ZTI6 216 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 SSX8Q7RTT4 187 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 RNF144BQ7Z419 303 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 C1orf158Q8N1D5 194 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 PRR26Q8N8Z3 221 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 SGMS2Q8NHU3 365 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 GATAD1Q8WUU5 269 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 MRPL24Q96A35 216 aaKnown RBP3.53□□□□□ -1.84
ATXN3-227ENST00000554491 C2orf50Q96LR7 162 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 PRELID3AQ96N28 172 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 RARRES2Q99969 163 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 C20orf78Q9BR46 151 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 ULBP3Q9BZM4 244 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 CHST6Q9GZX3 395 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 TMEM222Q9H0R3 208 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 VSIRQ9H7M9 311 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 JPT2Q9H910 190 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 PELI2Q9HAT8 420 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 EDA2RQ9HAV5 297 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 PKIGQ9Y2B9 76 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 POLR1DQ9Y2S0 133 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 KLHDC2Q9Y2U9 406 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 NSG2Q9Y328 171 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 NUP210LQ5VU65 1888 aa3.53□□□□□ -1.84
ATXN3-227ENST00000554491 EEF1E1-BLOC1S5C9J1V9 151 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 SLC17A2O00624 439 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 OVOL1O14753 267 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 UQCRQO14949 82 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 ANGPTL7O43827 346 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 GPR137BO60478 399 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 SNCGO76070 127 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 DPM2O94777 84 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 DUSP14O95147 198 aaKnown RBP3.52□□□□□ -1.85
ATXN3-227ENST00000554491 APOMO95445 188 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 IGHMP01871 453 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 MT-ND6P03923 174 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 ATP5G1P05496 136 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 SMIM13P0DJ93 91 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 GP9P14770 177 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 COX6B1P14854 86 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 GATA2P23769 480 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-227ENST00000554491 FCGR2CP31995 323 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 ATP5G3P48201 142 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 PSMB3P49720 205 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 SSR4P51571 173 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 CX3CL1P78423 397 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 IL15RAQ13261 267 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 WFDC2Q14508 124 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 ZNF672Q499Z4 452 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-227ENST00000554491 IBA57Q5T440 356 aaKnown RBP3.52□□□□□ -1.85
ATXN3-227ENST00000554491 Q5XG85 94 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms