RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 WIPF2Q8TF74 440 aaPredicted RBP8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 MBD3L1Q8WWY6 194 aa8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 RAB24Q969Q5 203 aa8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 RCC1LQ96I51 464 aaKnown RBP8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 METTL26Q96S19 204 aa8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 C20orf24Q9BUV8 137 aa8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 HRH4Q9H3N8 390 aa8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 SLC25A22Q9H936 323 aa8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 TECRQ9NZ01 308 aaKnown RBP8.07□□□□□ -1.12
TMEM55B-205ENST00000554028 FN1P02751 2386 aaKnown RBP8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 MAP1LC3B2A6NCE7 125 aa8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 LINC01619G3V211 115 aa8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 CXorf1O96002 111 aa8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 TRBV12-3P01733 135 aa8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 NMBP08949 121 aa8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 C8orf88P0DMB2 117 aa8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 BMI1P35226 326 aa8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 NDUFA5Q16718 116 aa8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 KHDC3LQ587J8 217 aa8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 TCTEX1D4Q5JR98 221 aa8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 GPHB5Q86YW7 130 aa8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 IQCF2Q8IXL9 164 aa8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 OR1N2Q8NGR9 330 aa8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 TMEM37Q8WXS4 190 aa8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 MAP1LC3BQ9GZQ8 125 aa8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 SEPSECSQ9HD40 501 aaKnown RBP8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 MRPL27Q9P0M9 148 aaKnown RBP8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 UFC1Q9Y3C8 167 aa8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 NSD1Q96L73 2696 aaPredicted RBP8.06□□□□□ -1.12
TMEM55B-205ENST00000554028 TRAV1-1A0A0B4J248 108 aa8.05□□□□□ -1.12
TMEM55B-205ENST00000554028 A0A1W2PRX2 142 aa8.05□□□□□ -1.12
TMEM55B-205ENST00000554028 A0A1W2PS18 150 aa8.05□□□□□ -1.12
TMEM55B-205ENST00000554028 I3L521 148 aa8.05□□□□□ -1.12
TMEM55B-205ENST00000554028 OR7C2O60412 319 aa8.05□□□□□ -1.12
TMEM55B-205ENST00000554028 IFNA1P01562 189 aa8.05□□□□□ -1.12
TMEM55B-205ENST00000554028 PPT1P50897 306 aa8.05□□□□□ -1.12
TMEM55B-205ENST00000554028 USF2Q15853 346 aaPredicted RBP8.05□□□□□ -1.12
TMEM55B-205ENST00000554028 PATE2Q6UY27 113 aa8.05□□□□□ -1.12
TMEM55B-205ENST00000554028 PQLC2Q6ZP29 291 aa8.05□□□□□ -1.12
TMEM55B-205ENST00000554028 MIR17HGQ75NE6 70 aa8.05□□□□□ -1.12
TMEM55B-205ENST00000554028 OR11H1Q8NG94 326 aa8.05□□□□□ -1.12
TMEM55B-205ENST00000554028 PCNPQ8WW12 178 aaKnown RBP8.05□□□□□ -1.12
TMEM55B-205ENST00000554028 GRAMD2BQ96HH9 432 aa8.05□□□□□ -1.12
TMEM55B-205ENST00000554028 CITED2Q99967 270 aaPredicted RBP8.05□□□□□ -1.12
TMEM55B-205ENST00000554028 SLC25A39Q9BZJ4 359 aaPredicted RBP8.05□□□□□ -1.12
TMEM55B-205ENST00000554028 TMEM231Q9H6L2 316 aa8.05□□□□□ -1.12
TMEM55B-205ENST00000554028 IGHV4OR15-8A0A075B7B6 117 aa8.04□□□□□ -1.12
TMEM55B-205ENST00000554028 A0A087WW49 117 aa8.04□□□□□ -1.12
TMEM55B-205ENST00000554028 A0A1B0GV50 99 aa8.04□□□□□ -1.12
TMEM55B-205ENST00000554028 K7EMT4 169 aa8.04□□□□□ -1.12
TMEM55B-205ENST00000554028 HMGB3O15347 200 aaKnown RBP8.04□□□□□ -1.12
TMEM55B-205ENST00000554028 STAG3L2P0CL84 134 aa8.04□□□□□ -1.12
TMEM55B-205ENST00000554028 STAG3L3P0CL85 134 aa8.04□□□□□ -1.12
TMEM55B-205ENST00000554028 PSMB3P49720 205 aa8.04□□□□□ -1.12
TMEM55B-205ENST00000554028 ZNF726P1Q15940 193 aa8.04□□□□□ -1.12
TMEM55B-205ENST00000554028 IL34Q6ZMJ4 242 aa8.04□□□□□ -1.12
TMEM55B-205ENST00000554028 NDUFA11Q86Y39 141 aa8.04□□□□□ -1.12
TMEM55B-205ENST00000554028 BPIFA4PQ86YQ2 179 aa8.04□□□□□ -1.12
TMEM55B-205ENST00000554028 C1QL4Q86Z23 238 aa8.04□□□□□ -1.12
TMEM55B-205ENST00000554028 TMEM190Q8WZ59 177 aa8.04□□□□□ -1.12
TMEM55B-205ENST00000554028 UHRF2Q96PU4 802 aa8.04□□□□□ -1.12
TMEM55B-205ENST00000554028 SHANK2-AS3Q9BTD1 123 aa8.04□□□□□ -1.12
TMEM55B-205ENST00000554028 ZFAND3Q9H8U3 227 aa8.04□□□□□ -1.12
TMEM55B-205ENST00000554028 PEMTQ9UBM1 199 aa8.04□□□□□ -1.12
TMEM55B-205ENST00000554028 IGHV3OR16-8A0A075B7F1 116 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 ZNF98A6NK75 572 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 M0QZ24 198 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 CCL24O00175 119 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 LGALS9O00182 355 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 RPL7P18124 248 aaKnown RBP8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 HOXD3P31249 432 aaPredicted RBP8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 FGF8P55075 233 aaPredicted RBP8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 NSUN5P1Q3KNT7 163 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 KRTAP21-3Q3LHN1 58 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 AWAT1Q58HT5 328 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 C1orf194Q5T5A4 169 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 SPATA31B1PQ5VZV4 182 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 C8orf86Q6ZUL3 223 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 OR8I2Q8N0Y5 310 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 OR4F17Q8NGA8 305 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 TMEM158Q8WZ71 300 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 MARC2Q969Z3 335 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 GPR82Q96P67 336 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 OR4F4Q96R69 305 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 PAXXQ9BUH6 204 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 OR51M1Q9H341 326 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 DAZ1Q9NQZ3 744 aaKnown RBP8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 TMEM167BQ9NRX6 74 aa8.03□□□□□ -1.12
TMEM55B-205ENST00000554028 SETD2Q9BYW2 2564 aaPredicted RBP8.02□□□□□ -1.13
TMEM55B-205ENST00000554028 TRAV5A0A0B4J249 113 aa8.02□□□□□ -1.13
TMEM55B-205ENST00000554028 LINC00862A6NCI5 91 aa8.02□□□□□ -1.13
TMEM55B-205ENST00000554028 H3BRN7 92 aa8.02□□□□□ -1.13
TMEM55B-205ENST00000554028 J3QL48 77 aa8.02□□□□□ -1.13
TMEM55B-205ENST00000554028 ZNF207O43670 478 aaKnown RBP8.02□□□□□ -1.13
TMEM55B-205ENST00000554028 ARL14EPLP0DKL9 152 aa8.02□□□□□ -1.13
TMEM55B-205ENST00000554028 CRYBB3P26998 211 aa8.02□□□□□ -1.13
TMEM55B-205ENST00000554028 GCHFRP30047 84 aa8.02□□□□□ -1.13
TMEM55B-205ENST00000554028 TAGLN2P37802 199 aaKnown RBP8.02□□□□□ -1.13
TMEM55B-205ENST00000554028 SYNJ2BPP57105 145 aa8.02□□□□□ -1.13
TMEM55B-205ENST00000554028 KLF5Q13887 457 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms