RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 S100A2P29034 98 aa6.74□□□□□ -1.33
TDP1-208ENST00000553989 SLC38A11Q08AI6 406 aa6.74□□□□□ -1.33
TDP1-208ENST00000553989 RPEL1Q2QD12 228 aa6.74□□□□□ -1.33
TDP1-208ENST00000553989 SPANXN5Q5MJ07 72 aa6.74□□□□□ -1.33
TDP1-208ENST00000553989 ZNF383Q8NA42 475 aa6.74□□□□□ -1.33
TDP1-208ENST00000553989 OR52E5Q8NH55 327 aa6.74□□□□□ -1.33
TDP1-208ENST00000553989 ISOC2Q96AB3 205 aa6.74□□□□□ -1.33
TDP1-208ENST00000553989 TXNDC17Q9BRA2 123 aa6.74□□□□□ -1.33
TDP1-208ENST00000553989 RBKSQ9H477 322 aa6.74□□□□□ -1.33
TDP1-208ENST00000553989 SDF2L1Q9HCN8 221 aa6.74□□□□□ -1.33
TDP1-208ENST00000553989 MANBALQ9NQG1 85 aa6.74□□□□□ -1.33
TDP1-208ENST00000553989 SLC35D1Q9NTN3 355 aa6.74□□□□□ -1.33
TDP1-208ENST00000553989 GNG13Q9P2W3 67 aa6.74□□□□□ -1.33
TDP1-208ENST00000553989 NAT8Q9UHE5 227 aa6.74□□□□□ -1.33
TDP1-208ENST00000553989 HUWE1Q7Z6Z7 4374 aaKnown RBP6.73□□□□□ -1.33
TDP1-208ENST00000553989 TRBV24-1A0A075B6N3 115 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 A0A0G2JRQ6 117 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 CTXND1A0A1B0GTU2 59 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 A0A1B0GV50 99 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 ITGB1BP1O14713 200 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 MPDU1O75352 247 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 P0C879 139 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 APELAP0DMC3 54 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 NQO2P16083 231 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 KIR2DS2P43631 304 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 ATP5IP56385 69 aaPredicted RBP6.73□□□□□ -1.33
TDP1-208ENST00000553989 LINC00205P59089 165 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 RAB11AP62491 216 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 EIF4EBP1Q13541 118 aaPredicted RBP6.73□□□□□ -1.33
TDP1-208ENST00000553989 KLF5Q13887 457 aaPredicted RBP6.73□□□□□ -1.33
TDP1-208ENST00000553989 ELOBQ15370 118 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 ZNF674Q2M3X9 581 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 ACOT6Q3I5F7 207 aaPredicted RBP6.73□□□□□ -1.33
TDP1-208ENST00000553989 LCE2AQ5TA79 106 aaPredicted RBP6.73□□□□□ -1.33
TDP1-208ENST00000553989 LCN15Q6UWW0 184 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 H2BFWTQ7Z2G1 175 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 CYB561D1Q8N8Q1 229 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 IL17DQ8TAD2 202 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 FAM210BQ96KR6 192 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 HARBI1Q96MB7 349 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 FAM110AQ9BQ89 295 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 PLEKHA3Q9HB20 300 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 RETNQ9HD89 108 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 PEMTQ9UBM1 199 aa6.73□□□□□ -1.33
TDP1-208ENST00000553989 PEF1Q9UBV8 284 aaKnown RBP6.73□□□□□ -1.33
TDP1-208ENST00000553989 MAP1LC3B2A6NCE7 125 aa6.72□□□□□ -1.33
TDP1-208ENST00000553989 ZNF727A8MUV8 499 aa6.72□□□□□ -1.33
TDP1-208ENST00000553989 RBFOX2O43251 390 aaKnown RBP eCLIP6.72□□□□□ -1.33
TDP1-208ENST00000553989 HPRT1P00492 218 aa6.72□□□□□ -1.33
TDP1-208ENST00000553989 FABP1P07148 127 aa6.72□□□□□ -1.33
TDP1-208ENST00000553989 IAPPP10997 89 aa6.72□□□□□ -1.33
TDP1-208ENST00000553989 NDUFA6P56556 154 aa6.72□□□□□ -1.33
TDP1-208ENST00000553989 OR2B8PP59922 312 aa6.72□□□□□ -1.33
TDP1-208ENST00000553989 VWC2Q2TAL6 325 aa6.72□□□□□ -1.33
TDP1-208ENST00000553989 AARDQ4LEZ3 155 aa6.72□□□□□ -1.33
TDP1-208ENST00000553989 FAM90A2PQ658T7 463 aa6.72□□□□□ -1.33
TDP1-208ENST00000553989 OR10G9Q8NGN4 311 aa6.72□□□□□ -1.33
TDP1-208ENST00000553989 OR10G7Q8NGN6 311 aa6.72□□□□□ -1.33
TDP1-208ENST00000553989 DYNLRB2Q8TF09 96 aa6.72□□□□□ -1.33
TDP1-208ENST00000553989 TMEM68Q96MH6 324 aa6.72□□□□□ -1.33
TDP1-208ENST00000553989 GPHA2Q96T91 129 aa6.72□□□□□ -1.33
TDP1-208ENST00000553989 MAP1LC3BQ9GZQ8 125 aa6.72□□□□□ -1.33
TDP1-208ENST00000553989 OR2D2Q9H210 308 aa6.72□□□□□ -1.33
TDP1-208ENST00000553989 NIT2Q9NQR4 276 aa6.72□□□□□ -1.33
TDP1-208ENST00000553989 CEBPZOSA8MTT3 80 aa6.71□□□□□ -1.34
TDP1-208ENST00000553989 KRASP01116 189 aa6.71□□□□□ -1.34
TDP1-208ENST00000553989 TRBV12-3P01733 135 aa6.71□□□□□ -1.34
TDP1-208ENST00000553989 CEBPGP53567 150 aa6.71□□□□□ -1.34
TDP1-208ENST00000553989 SPCS3P61009 180 aa6.71□□□□□ -1.34
TDP1-208ENST00000553989 ARL16Q0P5N6 197 aa6.71□□□□□ -1.34
TDP1-208ENST00000553989 TNXAQ16473 311 aa6.71□□□□□ -1.34
TDP1-208ENST00000553989 RTL8BQ17RB0 113 aa6.71□□□□□ -1.34
TDP1-208ENST00000553989 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.71□□□□□ -1.34
TDP1-208ENST00000553989 DTD1Q8TEA8 209 aa6.71□□□□□ -1.34
TDP1-208ENST00000553989 USMG5Q96IX5 58 aa6.71□□□□□ -1.34
TDP1-208ENST00000553989 PYGO2Q9BRQ0 406 aa6.71□□□□□ -1.34
TDP1-208ENST00000553989 KCNIP2Q9NS61 270 aa6.71□□□□□ -1.34
TDP1-208ENST00000553989 IZUMO1RA6ND01 250 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 ZFP92A6NM28 416 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 F6UZH7 168 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 H3BP45 60 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 PPP1R2P9O14990 202 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 PDE6DO43924 150 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 PROP1O75360 226 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 ACTL6BO94805 426 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 KBTBD11O94819 623 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 IGLV2-23P01705 113 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 CSN3P07498 182 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 MEF2BQ02080 365 aaPredicted RBP6.7□□□□□ -1.34
TDP1-208ENST00000553989 RAB31Q13636 194 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 BSXQ3C1V8 233 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 VMA21Q3ZAQ7 101 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 ZNF343Q6P1L6 599 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 CYP2G1PQ6ZSU1 146 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 RPP25LQ8N5L8 163 aaKnown RBP6.7□□□□□ -1.34
TDP1-208ENST00000553989 OR4A16Q8NH70 328 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 Q8WTZ3 238 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 ADTRPQ96IZ2 230 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 IMMP2LQ96T52 175 aa6.7□□□□□ -1.34
TDP1-208ENST00000553989 RSG1Q9BU20 258 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms