RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 TMEM14BQ9NUH8 114 aa9.89□□□□□ -0.83
SHMT2-207ENST00000553837 FNDC10F2Z333 226 aa9.88□□□□□ -0.83
SHMT2-207ENST00000553837 C16orf97H3BN30 126 aa9.88□□□□□ -0.83
SHMT2-207ENST00000553837 IGFBP2P18065 325 aa9.88□□□□□ -0.83
SHMT2-207ENST00000553837 ATP5L2Q7Z4Y8 100 aa9.88□□□□□ -0.83
SHMT2-207ENST00000553837 OR5A1Q8NGJ0 315 aa9.88□□□□□ -0.83
SHMT2-207ENST00000553837 ZNF355PQ9NSJ1 428 aa9.88□□□□□ -0.83
SHMT2-207ENST00000553837 TP73-AS1Q9UF72 201 aa9.88□□□□□ -0.83
SHMT2-207ENST00000553837 FOXA2Q9Y261 457 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-207ENST00000553837 LEPROTL1O95214 131 aa9.88□□□□□ -0.83
SHMT2-207ENST00000553837 GPR183P32249 361 aa9.88□□□□□ -0.83
SHMT2-207ENST00000553837 SEC11AP67812 179 aa9.88□□□□□ -0.83
SHMT2-207ENST00000553837 FAM120AOSQ5T036 256 aa9.88□□□□□ -0.83
SHMT2-207ENST00000553837 SLC25A48Q6ZT89 311 aaKnown RBP9.88□□□□□ -0.83
SHMT2-207ENST00000553837 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-207ENST00000553837 PMCHL2Q9BQD1 86 aa9.88□□□□□ -0.83
SHMT2-207ENST00000553837 RPUSD1Q9UJJ7 312 aaKnown RBP9.88□□□□□ -0.83
SHMT2-207ENST00000553837 TNCP24821 2201 aa9.88□□□□□ -0.83
SHMT2-207ENST00000553837 C7orf71A4D174 169 aa9.87□□□□□ -0.83
SHMT2-207ENST00000553837 C17orf100A8MU93 164 aa9.87□□□□□ -0.83
SHMT2-207ENST00000553837 CRYGCP07315 174 aa9.87□□□□□ -0.83
SHMT2-207ENST00000553837 OR5AL1P0C617 328 aa9.87□□□□□ -0.83
SHMT2-207ENST00000553837 CAMPP49913 170 aa9.87□□□□□ -0.83
SHMT2-207ENST00000553837 HSPE1P61604 102 aaKnown RBP9.87□□□□□ -0.83
SHMT2-207ENST00000553837 SMAGPQ0VAQ4 97 aa9.87□□□□□ -0.83
SHMT2-207ENST00000553837 ZNF503Q96F45 646 aa9.87□□□□□ -0.83
SHMT2-207ENST00000553837 URB1-AS1Q96HZ7 61 aa9.87□□□□□ -0.83
SHMT2-207ENST00000553837 AP1S3Q96PC3 154 aa9.87□□□□□ -0.83
SHMT2-207ENST00000553837 ENY2Q9NPA8 101 aa9.87□□□□□ -0.83
SHMT2-207ENST00000553837 K7EP34 96 aa9.87□□□□□ -0.83
SHMT2-207ENST00000553837 PRRG2O14669 202 aa9.87□□□□□ -0.83
SHMT2-207ENST00000553837 CCL3L1P16619 93 aa9.87□□□□□ -0.83
SHMT2-207ENST00000553837 PLP1P60201 277 aa9.87□□□□□ -0.83
SHMT2-207ENST00000553837 NHLRC2Q8NBF2 726 aa9.87□□□□□ -0.83
SHMT2-207ENST00000553837 RND1Q92730 232 aa9.87□□□□□ -0.83
SHMT2-207ENST00000553837 MRAP2Q96G30 205 aa9.87□□□□□ -0.83
SHMT2-207ENST00000553837 MAP1LC3CQ9BXW4 147 aa9.87□□□□□ -0.83
SHMT2-207ENST00000553837 JKAMPQ9P055 326 aa9.87□□□□□ -0.83
SHMT2-207ENST00000553837 A0A087X0K7 114 aa9.86□□□□□ -0.83
SHMT2-207ENST00000553837 IGHV1-24A0A0C4DH33 117 aa9.86□□□□□ -0.83
SHMT2-207ENST00000553837 HSD52Q0P140 79 aa9.86□□□□□ -0.83
SHMT2-207ENST00000553837 POU2AF1Q16633 256 aa9.86□□□□□ -0.83
SHMT2-207ENST00000553837 MOB3BQ86TA1 216 aa9.86□□□□□ -0.83
SHMT2-207ENST00000553837 HINT2Q9BX68 163 aa9.86□□□□□ -0.83
SHMT2-207ENST00000553837 HIST1H1EP10412 219 aaKnown RBP9.85□□□□□ -0.83
SHMT2-207ENST00000553837 LYPD2Q6UXB3 125 aa9.85□□□□□ -0.83
SHMT2-207ENST00000553837 GFRALQ6UXV0 394 aa9.85□□□□□ -0.83
SHMT2-207ENST00000553837 GTSF1LQ9H1H1 148 aa9.85□□□□□ -0.83
SHMT2-207ENST00000553837 SSUH2Q9Y2M2 353 aa9.85□□□□□ -0.83
SHMT2-207ENST00000553837 ZNF835Q9Y2P0 537 aa9.85□□□□□ -0.83
SHMT2-207ENST00000553837 PKDREJQ9NTG1 2253 aa9.85□□□□□ -0.83
SHMT2-207ENST00000553837 CEP295Q9C0D2 2601 aa9.85□□□□□ -0.83
SHMT2-207ENST00000553837 A0A1B0GXF2 115 aa9.85□□□□□ -0.83
SHMT2-207ENST00000553837 TMEM189A5PLL7 270 aa9.85□□□□□ -0.83
SHMT2-207ENST00000553837 FAM231BA6NCW3 169 aa9.85□□□□□ -0.83
SHMT2-207ENST00000553837 HIGD1CA8MV81 97 aa9.85□□□□□ -0.83
SHMT2-207ENST00000553837 LIPFP07098 398 aa9.85□□□□□ -0.83
SHMT2-207ENST00000553837 C8orf88P0DMB2 117 aa9.85□□□□□ -0.83
SHMT2-207ENST00000553837 CD300EQ496F6 205 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-207ENST00000553837 ZNF841Q6ZN19 808 aa9.85□□□□□ -0.83
SHMT2-207ENST00000553837 PGPEP1Q9NXJ5 209 aa9.85□□□□□ -0.83
SHMT2-207ENST00000553837 LINC00312Q9Y6C7 94 aa9.85□□□□□ -0.83
SHMT2-207ENST00000553837 PTPRZ1P23471 2315 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-207ENST00000553837 hADV38S2A0JD32 116 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 SH2D7A6NKC9 451 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-207ENST00000553837 OR11H12B2RN74 326 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 UPK2O00526 184 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 DIAPH2-AS1Q14236 149 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 TMEM200BQ69YZ2 307 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 SSX8Q7RTT4 187 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 BPIFA4PQ86YQ2 179 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 OR11H1Q8NG94 326 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 OR11H2Q8NH07 326 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 ADTRPQ96IZ2 230 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 MRPL20Q9BYC9 149 aaKnown RBP9.84□□□□□ -0.83
SHMT2-207ENST00000553837 NPFFR1Q9GZQ6 430 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 RAB9BQ9NP90 201 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 AMMECR1Q9Y4X0 333 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-207ENST00000553837 ARFGEF3Q5TH69 2177 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 TEX50A0A1B0GTY4 177 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 TMEM178BH3BS89 294 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 J3QR89 54 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 TNFRSF13BO14836 293 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-207ENST00000553837 TSPAN13O95857 204 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 COX8AP10176 69 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 HTR1DP28221 377 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 HBBP68871 147 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 MLANAQ16655 118 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 TMEM97Q5BJF2 176 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 ZNF833PQ6ZTB9 187 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 LINC00173Q6ZV60 143 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 SLC25A33Q9BSK2 321 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 HSPB8Q9UJY1 196 aa9.84□□□□□ -0.83
SHMT2-207ENST00000553837 IGKV1OR2-108A0A075B7D4 117 aa9.83□□□□□ -0.84
SHMT2-207ENST00000553837 PSMB11A5LHX3 300 aa9.83□□□□□ -0.84
SHMT2-207ENST00000553837 C9orf118A6NHY6 69 aa9.83□□□□□ -0.84
SHMT2-207ENST00000553837 VSTM5A8MXK1 200 aa9.83□□□□□ -0.84
SHMT2-207ENST00000553837 H3BRM9 83 aa9.83□□□□□ -0.84
SHMT2-207ENST00000553837 SAA1P0DJI8 122 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-207ENST00000553837 TNFRSF1AP19438 455 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms