RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 LYNX1G3V0Z9 82 aa10.28□□□□□ -0.76
SHMT2-205ENST00000553474 I3L2K1 104 aa10.28□□□□□ -0.76
SHMT2-205ENST00000553474 SERF1AO75920 110 aa10.28□□□□□ -0.76
SHMT2-205ENST00000553474 NDUFA3O95167 84 aa10.28□□□□□ -0.76
SHMT2-205ENST00000553474 SCGB1D1O95968 90 aa10.28□□□□□ -0.76
SHMT2-205ENST00000553474 TOMM40O96008 361 aa10.28□□□□□ -0.76
SHMT2-205ENST00000553474 LYNX1P0DP58 116 aa10.28□□□□□ -0.76
SHMT2-205ENST00000553474 CNTFRP26992 372 aa10.28□□□□□ -0.76
SHMT2-205ENST00000553474 PLGLAQ15195 96 aa10.28□□□□□ -0.76
SHMT2-205ENST00000553474 C1orf194Q5T5A4 169 aa10.28□□□□□ -0.76
SHMT2-205ENST00000553474 RASL11BQ9BPW5 248 aa10.28□□□□□ -0.76
SHMT2-205ENST00000553474 MLST8Q9BVC4 326 aa10.28□□□□□ -0.76
SHMT2-205ENST00000553474 PRO1933Q9H354 126 aa10.28□□□□□ -0.76
SHMT2-205ENST00000553474 FBXL15Q9H469 300 aa10.28□□□□□ -0.76
SHMT2-205ENST00000553474 ONECUT1Q9UBC0 465 aa10.28□□□□□ -0.76
SHMT2-205ENST00000553474 SOX21Q9Y651 276 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-205ENST00000553474 FASNP49327 2511 aaKnown RBP10.28□□□□□ -0.76
SHMT2-205ENST00000553474 FAM231BA6NCW3 169 aa10.27□□□□□ -0.77
SHMT2-205ENST00000553474 PGPA6NDG6 321 aa10.27□□□□□ -0.77
SHMT2-205ENST00000553474 OOSP1A8MZH6 123 aa10.27□□□□□ -0.77
SHMT2-205ENST00000553474 C19orf84I3L1E1 186 aa10.27□□□□□ -0.77
SHMT2-205ENST00000553474 NBR2O15453 112 aa10.27□□□□□ -0.77
SHMT2-205ENST00000553474 IGHV3-48P01763 117 aa10.27□□□□□ -0.77
SHMT2-205ENST00000553474 COX7A1P24310 79 aa10.27□□□□□ -0.77
SHMT2-205ENST00000553474 GPR6P46095 362 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-205ENST00000553474 NUDT10Q8NFP7 164 aa10.27□□□□□ -0.77
SHMT2-205ENST00000553474 NUDT11Q96G61 164 aa10.27□□□□□ -0.77
SHMT2-205ENST00000553474 C7orf69Q9H7B7 122 aa10.27□□□□□ -0.77
SHMT2-205ENST00000553474 OTORQ9NRC9 128 aa10.27□□□□□ -0.77
SHMT2-205ENST00000553474 MRPL27Q9P0M9 148 aaKnown RBP10.27□□□□□ -0.77
SHMT2-205ENST00000553474 ZNF492Q9P255 531 aa10.27□□□□□ -0.77
SHMT2-205ENST00000553474 UTP20O75691 2785 aaKnown RBP10.27□□□□□ -0.77
SHMT2-205ENST00000553474 TRAV30A0A087WSZ9 112 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 TRBV6-1A0A0K0K1D8 114 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 NUPR1O60356 82 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 LTAP01374 205 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 PRTN3P24158 256 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 LINC00310P59036 64 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 C11orf71Q6IPW1 123 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 CCDC144NLQ6NUI1 221 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 LYPD1Q8N2G4 141 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 KIR3DL3Q8N743 410 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 ZNF48Q96MX3 618 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-205ENST00000553474 SAMD10Q9BYL1 202 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 GFRA4Q9GZZ7 299 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 KIR2DL5BA0A0G2JN68 375 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 KIR2DL5BA0A0G2JPC4 375 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 ODF3BA8MYP8 253 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 TIMM23O14925 209 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 CNIH1O95406 144 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 APCSP02743 223 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 TCRAP04437 139 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 PSG1P11464 419 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 MMDQ15546 238 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 KIR2DL5AQ8N109 375 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 SIGLECL1Q8N7X8 197 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 CFHR4Q92496 578 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 LINC00479Q96M42 142 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 SSBP3Q9BWW4 388 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-205ENST00000553474 WNT10AQ9GZT5 417 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 GNB4Q9HAV0 340 aa10.26□□□□□ -0.77
SHMT2-205ENST00000553474 LOC105371242A0A075B767 164 aa10.25□□□□□ -0.77
SHMT2-205ENST00000553474 A8MWL6 223 aa10.25□□□□□ -0.77
SHMT2-205ENST00000553474 GPX1P07203 203 aa10.25□□□□□ -0.77
SHMT2-205ENST00000553474 MRPL52Q86TS9 123 aaKnown RBP10.25□□□□□ -0.77
SHMT2-205ENST00000553474 NUP35Q8NFH5 326 aa10.25□□□□□ -0.77
SHMT2-205ENST00000553474 BLNKQ8WV28 456 aa10.25□□□□□ -0.77
SHMT2-205ENST00000553474 KCNS1Q96KK3 526 aa10.25□□□□□ -0.77
SHMT2-205ENST00000553474 SLC25A39Q9BZJ4 359 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-205ENST00000553474 PRSS22Q9GZN4 317 aa10.25□□□□□ -0.77
SHMT2-205ENST00000553474 Q9H3A6 140 aa10.25□□□□□ -0.77
SHMT2-205ENST00000553474 ZNF586Q9NXT0 402 aa10.25□□□□□ -0.77
SHMT2-205ENST00000553474 A0A1B0GUS0 222 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 BMPR1BO00238 502 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 ZNF253O75346 499 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 OR2J3O76001 311 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 TCL1AP56279 114 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 FAM162BQ5T6X4 162 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 MRPL54Q6P161 138 aaKnown RBP10.24□□□□□ -0.77
SHMT2-205ENST00000553474 TEX43Q6ZNM6 134 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 Q6ZWC4 215 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 DTX2Q86UW9 622 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 TRAV34A0A0B4J273 112 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 NPIPB5A8MRT5 1133 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 K7EIM0 57 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 LYZP61626 148 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 MINOS1Q5TGZ0 78 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 RUSC1-AS1Q66K80 236 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 BPIFA4PQ86YQ2 179 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 NHLRC2Q8NBF2 726 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 OR4B1Q8NGF8 309 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 HSPB9Q9BQS6 159 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 C2orf88Q9BSF0 95 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 RPP21Q9H633 154 aaKnown RBP10.24□□□□□ -0.77
SHMT2-205ENST00000553474 MINOS1-NBL1R4GNA1 71 aa10.24□□□□□ -0.77
SHMT2-205ENST00000553474 USP9YO00507 2555 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-205ENST00000553474 COL12A1Q99715 3063 aa10.23□□□□□ -0.77
SHMT2-205ENST00000553474 HIGD1CA8MV81 97 aa10.23□□□□□ -0.77
SHMT2-205ENST00000553474 SCGB2A1O75556 95 aa10.23□□□□□ -0.77
SHMT2-205ENST00000553474 IGKV1-17P01599 117 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms