RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 INPP1P49441 399 aa9.2□□□□□ -0.94
LINC00643-202ENST00000553426 MEOX2P50222 304 aa9.2□□□□□ -0.94
LINC00643-202ENST00000553426 EBLN2Q6P2I7 272 aa9.2□□□□□ -0.94
LINC00643-202ENST00000553426 OR4B1Q8NGF8 309 aa9.2□□□□□ -0.94
LINC00643-202ENST00000553426 TRIM63Q969Q1 353 aa9.2□□□□□ -0.94
LINC00643-202ENST00000553426 WDR12Q9GZL7 423 aaKnown RBP9.2□□□□□ -0.94
LINC00643-202ENST00000553426 SAV1Q9H4B6 383 aaPredicted RBP9.2□□□□□ -0.94
LINC00643-202ENST00000553426 IGHV3OR16-12A0A075B7B8 117 aa9.19□□□□□ -0.94
LINC00643-202ENST00000553426 WRBO00258 174 aa9.19□□□□□ -0.94
LINC00643-202ENST00000553426 ISLRO14498 428 aa9.19□□□□□ -0.94
LINC00643-202ENST00000553426 SFT2D2O95562 160 aa9.19□□□□□ -0.94
LINC00643-202ENST00000553426 HOXB5P09067 269 aa9.19□□□□□ -0.94
LINC00643-202ENST00000553426 AKR1C1Q04828 323 aa9.19□□□□□ -0.94
LINC00643-202ENST00000553426 PPP1R1AQ13522 171 aa9.19□□□□□ -0.94
LINC00643-202ENST00000553426 C12orf74Q32Q52 190 aa9.19□□□□□ -0.94
LINC00643-202ENST00000553426 SPANXN2Q5MJ10 180 aa9.19□□□□□ -0.94
LINC00643-202ENST00000553426 BPIFCQ8NFQ6 507 aa9.19□□□□□ -0.94
LINC00643-202ENST00000553426 NEU1Q99519 415 aa9.19□□□□□ -0.94
LINC00643-202ENST00000553426 RPRMQ9NS64 109 aa9.19□□□□□ -0.94
LINC00643-202ENST00000553426 SLC45A2Q9UMX9 530 aa9.19□□□□□ -0.94
LINC00643-202ENST00000553426 V9GYH0 126 aa9.19□□□□□ -0.94
LINC00643-202ENST00000553426 ABCA13Q86UQ4 5058 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 TEX48A0A1B0GUV7 120 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 SPART-AS1P0CW21 52 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 EMP1P54849 157 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 UBE2MP61081 183 aaKnown RBP9.18□□□□□ -0.94
LINC00643-202ENST00000553426 PRR20EP86478 221 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 PRR20CP86479 221 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 PRR20DP86480 221 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 PRR20BP86481 221 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 PRR20AP86496 221 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 PSG9Q00887 426 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 SPANXN5Q5MJ07 72 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 GDF5OSQ5U4N7 250 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 ZNF705AQ6ZN79 300 aaPredicted RBP9.18□□□□□ -0.94
LINC00643-202ENST00000553426 THAP8Q8NA92 274 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 C16orf92Q96LL3 132 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 CLUHP3Q96NS8 147 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 GPR82Q96P67 336 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 C7orf50Q9BRJ6 194 aaKnown RBP9.18□□□□□ -0.94
LINC00643-202ENST00000553426 NDUFAF3Q9BU61 184 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 MAGT1Q9H0U3 335 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 SLC25A22Q9H936 323 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 CELA1Q9UNI1 258 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 GOLT1BQ9Y3E0 138 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 STRAPQ9Y3F4 350 aaKnown RBP9.18□□□□□ -0.94
LINC00643-202ENST00000553426 RFNGQ9Y644 331 aa9.18□□□□□ -0.94
LINC00643-202ENST00000553426 ZNF705FA8MVS1 300 aaPredicted RBP9.17□□□□□ -0.94
LINC00643-202ENST00000553426 AMBPP02760 352 aa9.17□□□□□ -0.94
LINC00643-202ENST00000553426 ZNF705DP0CH99 300 aaPredicted RBP9.17□□□□□ -0.94
LINC00643-202ENST00000553426 ZNF705BP0CI00 300 aaPredicted RBP9.17□□□□□ -0.94
LINC00643-202ENST00000553426 P0DMU3 169 aa9.17□□□□□ -0.94
LINC00643-202ENST00000553426 FAM231AP0DMU4 169 aa9.17□□□□□ -0.94
LINC00643-202ENST00000553426 FAM231CP0DMU5 169 aa9.17□□□□□ -0.94
LINC00643-202ENST00000553426 ORM2P19652 201 aa9.17□□□□□ -0.94
LINC00643-202ENST00000553426 PAX9P55771 341 aa9.17□□□□□ -0.94
LINC00643-202ENST00000553426 FXYD7P58549 80 aa9.17□□□□□ -0.94
LINC00643-202ENST00000553426 ZNF767PQ75MW2 155 aa9.17□□□□□ -0.94
LINC00643-202ENST00000553426 OR1B1Q8NGR6 318 aa9.17□□□□□ -0.94
LINC00643-202ENST00000553426 TMEM147Q9BVK8 224 aa9.17□□□□□ -0.94
LINC00643-202ENST00000553426 IGKV1OR2-108A0A075B7D4 117 aa9.16□□□□□ -0.94
LINC00643-202ENST00000553426 SMCO3A2RU48 225 aa9.16□□□□□ -0.94
LINC00643-202ENST00000553426 NAP1L6A6NFF2 107 aa9.16□□□□□ -0.94
LINC00643-202ENST00000553426 ZNF98A6NK75 572 aa9.16□□□□□ -0.94
LINC00643-202ENST00000553426 SOCS3O14543 225 aa9.16□□□□□ -0.94
LINC00643-202ENST00000553426 IFNA21P01568 189 aa9.16□□□□□ -0.94
LINC00643-202ENST00000553426 HBE1P02100 147 aa9.16□□□□□ -0.94
LINC00643-202ENST00000553426 DEFB1P60022 68 aa9.16□□□□□ -0.94
LINC00643-202ENST00000553426 ZNF79Q15937 498 aa9.16□□□□□ -0.94
LINC00643-202ENST00000553426 FAM78BQ5VT40 261 aa9.16□□□□□ -0.94
LINC00643-202ENST00000553426 TRIQKQ629K1 86 aa9.16□□□□□ -0.94
LINC00643-202ENST00000553426 S100A7AQ86SG5 101 aa9.16□□□□□ -0.94
LINC00643-202ENST00000553426 CCDC190Q86UF4 302 aa9.16□□□□□ -0.94
LINC00643-202ENST00000553426 OR4D5Q8NGN0 318 aa9.16□□□□□ -0.94
LINC00643-202ENST00000553426 RSG1Q9BU20 258 aa9.16□□□□□ -0.94
LINC00643-202ENST00000553426 A0A0J9YX75 114 aa9.15□□□□□ -0.94
LINC00643-202ENST00000553426 H3BP45 60 aa9.15□□□□□ -0.94
LINC00643-202ENST00000553426 RAP2BP61225 183 aa9.15□□□□□ -0.94
LINC00643-202ENST00000553426 ACOT7LQ6ZUV0 252 aa9.15□□□□□ -0.94
LINC00643-202ENST00000553426 ZNF709Q8N972 641 aa9.15□□□□□ -0.94
LINC00643-202ENST00000553426 TMEM208Q9BTX3 173 aa9.15□□□□□ -0.94
LINC00643-202ENST00000553426 SLC35B3Q9H1N7 401 aa9.15□□□□□ -0.94
LINC00643-202ENST00000553426 SLC25A32Q9H2D1 315 aa9.15□□□□□ -0.94
LINC00643-202ENST00000553426 DOK5Q9P104 306 aa9.15□□□□□ -0.94
LINC00643-202ENST00000553426 DNAH6Q9C0G6 4158 aa9.15□□□□□ -0.95
LINC00643-202ENST00000553426 CENPXA8MT69 81 aa9.14□□□□□ -0.95
LINC00643-202ENST00000553426 PRSS46E5RG02 174 aa9.14□□□□□ -0.95
LINC00643-202ENST00000553426 F6UB75 175 aa9.14□□□□□ -0.95
LINC00643-202ENST00000553426 DUSP14O95147 198 aaKnown RBP9.14□□□□□ -0.95
LINC00643-202ENST00000553426 IL5P05113 134 aa9.14□□□□□ -0.95
LINC00643-202ENST00000553426 RRN3P1Q2M238 152 aa9.14□□□□□ -0.95
LINC00643-202ENST00000553426 TMEM144Q7Z5S9 345 aa9.14□□□□□ -0.95
LINC00643-202ENST00000553426 POM121L12Q8N7R1 296 aa9.14□□□□□ -0.95
LINC00643-202ENST00000553426 FAM210BQ96KR6 192 aa9.14□□□□□ -0.95
LINC00643-202ENST00000553426 PSENENQ9NZ42 101 aa9.14□□□□□ -0.95
LINC00643-202ENST00000553426 C9orf170A2RU37 121 aa9.13□□□□□ -0.95
LINC00643-202ENST00000553426 ZNF701M0R085 212 aaPredicted RBP9.13□□□□□ -0.95
LINC00643-202ENST00000553426 RPL7P18124 248 aaKnown RBP9.13□□□□□ -0.95
LINC00643-202ENST00000553426 GATA2P23769 480 aaPredicted RBP9.13□□□□□ -0.95
LINC00643-202ENST00000553426 POLR2GP62487 172 aaKnown RBP eCLIP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms