RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 TRGV3P03979 118 aa15.19■□□□□ 0.02
RBFOX1-215ENST00000553186 ATP5G2Q06055 141 aa15.19■□□□□ 0.02
RBFOX1-215ENST00000553186 Q8WTZ3 238 aa15.19■□□□□ 0.02
RBFOX1-215ENST00000553186 EEF1AKMT3Q96AZ1 226 aa15.19■□□□□ 0.02
RBFOX1-215ENST00000553186 PAXXQ9BUH6 204 aa15.19■□□□□ 0.02
RBFOX1-215ENST00000553186 OR51M1Q9H341 326 aa15.19■□□□□ 0.02
RBFOX1-215ENST00000553186 PUS1Q9Y606 427 aaKnown RBP eCLIP15.19■□□□□ 0.02
RBFOX1-215ENST00000553186 PDE6DO43924 150 aa15.18■□□□□ 0.02
RBFOX1-215ENST00000553186 UBE2L3P68036 154 aaKnown RBP15.18■□□□□ 0.02
RBFOX1-215ENST00000553186 USF2Q15853 346 aaPredicted RBP15.18■□□□□ 0.02
RBFOX1-215ENST00000553186 LEMD1Q68G75 181 aa15.18■□□□□ 0.02
RBFOX1-215ENST00000553186 FXYD5Q96DB9 178 aa15.18■□□□□ 0.02
RBFOX1-215ENST00000553186 DNASE2O00115 360 aaPredicted RBP15.18■□□□□ 0.02
RBFOX1-215ENST00000553186 STXBP6Q8NFX7 210 aa15.18■□□□□ 0.02
RBFOX1-215ENST00000553186 KLK15Q9H2R5 256 aa15.18■□□□□ 0.02
RBFOX1-215ENST00000553186 SCGB2A1O75556 95 aa15.17■□□□□ 0.02
RBFOX1-215ENST00000553186 CLEC19AQ6UXS0 136 aa15.17■□□□□ 0.02
RBFOX1-215ENST00000553186 NIPSNAP3BQ9BS92 247 aa15.17■□□□□ 0.02
RBFOX1-215ENST00000553186 YAE1D1Q9NRH1 226 aa15.17■□□□□ 0.02
RBFOX1-215ENST00000553186 GAR1Q9NY12 217 aaKnown RBP15.17■□□□□ 0.02
RBFOX1-215ENST00000553186 GP9P14770 177 aa15.17■□□□□ 0.02
RBFOX1-215ENST00000553186 SRP14P37108 136 aaKnown RBP15.17■□□□□ 0.02
RBFOX1-215ENST00000553186 AWAT1Q58HT5 328 aa15.17■□□□□ 0.02
RBFOX1-215ENST00000553186 ATP6V0BQ99437 205 aa15.17■□□□□ 0.02
RBFOX1-215ENST00000553186 SHANK2-AS3Q9BTD1 123 aa15.17■□□□□ 0.02
RBFOX1-215ENST00000553186 C20orf24Q9BUV8 137 aa15.17■□□□□ 0.02
RBFOX1-215ENST00000553186 TPPP2P59282 170 aa15.16■□□□□ 0.02
RBFOX1-215ENST00000553186 ZNF343Q6P1L6 599 aa15.16■□□□□ 0.02
RBFOX1-215ENST00000553186 RPUSD4Q96CM3 377 aaKnown RBP15.16■□□□□ 0.02
RBFOX1-215ENST00000553186 PARLQ9H300 379 aa15.16■□□□□ 0.02
RBFOX1-215ENST00000553186 OTOGQ6ZRI0 2925 aa15.16■□□□□ 0.02
RBFOX1-215ENST00000553186 A0A1W2PRE2 83 aa15.15■□□□□ 0.02
RBFOX1-215ENST00000553186 F6UZH7 168 aa15.15■□□□□ 0.02
RBFOX1-215ENST00000553186 H3BRN7 92 aa15.15■□□□□ 0.02
RBFOX1-215ENST00000553186 DUX5Q96PT3 197 aa15.15■□□□□ 0.02
RBFOX1-215ENST00000553186 ZNF702PQ9H963 129 aa15.15■□□□□ 0.02
RBFOX1-215ENST00000553186 ZNF727A8MUV8 499 aa15.15■□□□□ 0.02
RBFOX1-215ENST00000553186 GGTLC3B5MD39 225 aa15.15■□□□□ 0.02
RBFOX1-215ENST00000553186 M0R036 132 aa15.15■□□□□ 0.02
RBFOX1-215ENST00000553186 TGOLN2O43493 480 aa15.15■□□□□ 0.02
RBFOX1-215ENST00000553186 ZNF600Q6ZNG1 722 aa15.15■□□□□ 0.02
RBFOX1-215ENST00000553186 USMG5Q96IX5 58 aa15.15■□□□□ 0.02
RBFOX1-215ENST00000553186 PRSS22Q9GZN4 317 aa15.15■□□□□ 0.02
RBFOX1-215ENST00000553186 NPFFR1Q9GZQ6 430 aa15.15■□□□□ 0.02
RBFOX1-215ENST00000553186 IGHV3-35A0A0C4DH35 117 aa15.14■□□□□ 0.01
RBFOX1-215ENST00000553186 FAM74A3Q4VXF1 159 aa15.14■□□□□ 0.01
RBFOX1-215ENST00000553186 SMIM7Q9BQ49 75 aa15.14■□□□□ 0.01
RBFOX1-215ENST00000553186 SCO2A0A1W2PP80 73 aa15.14■□□□□ 0.01
RBFOX1-215ENST00000553186 C7orf77A4D0Y5 90 aa15.14■□□□□ 0.01
RBFOX1-215ENST00000553186 NDUFB4O95168 129 aa15.14■□□□□ 0.01
RBFOX1-215ENST00000553186 PF4V1P10720 104 aa15.14■□□□□ 0.01
RBFOX1-215ENST00000553186 ZNF329Q86UD4 541 aa15.14■□□□□ 0.01
RBFOX1-215ENST00000553186 TMEM86BQ8N661 226 aa15.14■□□□□ 0.01
RBFOX1-215ENST00000553186 TVP23CQ96ET8 276 aa15.14■□□□□ 0.01
RBFOX1-215ENST00000553186 TMEM14CQ9P0S9 112 aa15.14■□□□□ 0.01
RBFOX1-215ENST00000553186 IGHG4P01861 327 aa15.13■□□□□ 0.01
RBFOX1-215ENST00000553186 SNRPCP09234 159 aaKnown RBP15.13■□□□□ 0.01
RBFOX1-215ENST00000553186 RAB9AP51151 201 aa15.13■□□□□ 0.01
RBFOX1-215ENST00000553186 ZNF674Q2M3X9 581 aa15.13■□□□□ 0.01
RBFOX1-215ENST00000553186 LCNL1Q6ZST4 164 aa15.13■□□□□ 0.01
RBFOX1-215ENST00000553186 C11orf52Q96A22 123 aa15.13■□□□□ 0.01
RBFOX1-215ENST00000553186 DERL1Q9BUN8 251 aa15.13■□□□□ 0.01
RBFOX1-215ENST00000553186 ZFAND3Q9H8U3 227 aa15.13■□□□□ 0.01
RBFOX1-215ENST00000553186 TMEM88Q6PEY1 159 aa15.12■□□□□ 0.01
RBFOX1-215ENST00000553186 TOMM20LQ6UXN7 152 aa15.12■□□□□ 0.01
RBFOX1-215ENST00000553186 SDF2L1Q9HCN8 221 aa15.12■□□□□ 0.01
RBFOX1-215ENST00000553186 ANK3Q12955 4377 aaKnown RBP15.12■□□□□ 0.01
RBFOX1-215ENST00000553186 ZNF98A6NK75 572 aa15.12■□□□□ 0.01
RBFOX1-215ENST00000553186 NBEAP1P0C6P0 100 aa15.12■□□□□ 0.01
RBFOX1-215ENST00000553186 PSMB8P28062 276 aa15.12■□□□□ 0.01
RBFOX1-215ENST00000553186 AKR1C3P42330 323 aa15.12■□□□□ 0.01
RBFOX1-215ENST00000553186 SUMO1P63165 101 aaKnown RBP15.12■□□□□ 0.01
RBFOX1-215ENST00000553186 PPP5D1E7EU14 171 aa15.11■□□□□ 0.01
RBFOX1-215ENST00000553186 RHEBQ15382 184 aa15.11■□□□□ 0.01
RBFOX1-215ENST00000553186 Q8N2B8 174 aa15.11■□□□□ 0.01
RBFOX1-215ENST00000553186 GNB4Q9HAV0 340 aa15.11■□□□□ 0.01
RBFOX1-215ENST00000553186 RPS10P5Q9NQ39 176 aa15.11■□□□□ 0.01
RBFOX1-215ENST00000553186 MYCNOSP40205 109 aa15.11■□□□□ 0.01
RBFOX1-215ENST00000553186 C10orf99Q6UWK7 81 aa15.11■□□□□ 0.01
RBFOX1-215ENST00000553186 CBLN2Q8IUK8 224 aa15.11■□□□□ 0.01
RBFOX1-215ENST00000553186 SMR3AQ99954 134 aa15.11■□□□□ 0.01
RBFOX1-215ENST00000553186 NAT8Q9UHE5 227 aa15.11■□□□□ 0.01
RBFOX1-215ENST00000553186 IGHV3OR16-8A0A075B7F1 116 aa15.1■□□□□ 0.01
RBFOX1-215ENST00000553186 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.1■□□□□ 0.01
RBFOX1-215ENST00000553186 MRPS12O15235 138 aaKnown RBP15.1■□□□□ 0.01
RBFOX1-215ENST00000553186 TRBV12-3P01733 135 aa15.1■□□□□ 0.01
RBFOX1-215ENST00000553186 PNRC1Q12796 327 aaPredicted RBP15.1■□□□□ 0.01
RBFOX1-215ENST00000553186 TMEM241Q24JQ0 296 aa15.1■□□□□ 0.01
RBFOX1-215ENST00000553186 S100A7AQ86SG5 101 aa15.1■□□□□ 0.01
RBFOX1-215ENST00000553186 BLNKQ8WV28 456 aa15.1■□□□□ 0.01
RBFOX1-215ENST00000553186 ELOVL1Q9BW60 279 aa15.1■□□□□ 0.01
RBFOX1-215ENST00000553186 BMPR1BO00238 502 aa15.09■□□□□ 0.01
RBFOX1-215ENST00000553186 BPIFA4PQ86YQ2 179 aa15.09■□□□□ 0.01
RBFOX1-215ENST00000553186 ZNF586Q9NXT0 402 aa15.09■□□□□ 0.01
RBFOX1-215ENST00000553186 RABAC1Q9UI14 185 aa15.09■□□□□ 0.01
RBFOX1-215ENST00000553186 A0A0G2JLM5 398 aa15.09■□□□□ 0.01
RBFOX1-215ENST00000553186 CLPSL1A2RUU4 121 aa15.09■□□□□ 0.01
RBFOX1-215ENST00000553186 IGHV3-11P01762 117 aa15.09■□□□□ 0.01
RBFOX1-215ENST00000553186 HIST1H1EP10412 219 aaKnown RBP15.09■□□□□ 0.01
RBFOX1-215ENST00000553186 HNF1AP20823 631 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms