RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 NUPL2O15504 423 aaKnown RBP3.57□□□□□ -1.84
CKAP4-203ENST00000553039 PAX4O43316 350 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 PFDN1O60925 122 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 CRYZL1O95825 349 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 IGLV2-14P01704 120 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 C1QBP02746 253 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 ZNF735P0CB33 412 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 HIST1H1DP16402 221 aaKnown RBP3.57□□□□□ -1.84
CKAP4-203ENST00000553039 TBPP20226 339 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 HOXA5P20719 270 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 RCVRNP35243 200 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 PPT1P50897 306 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 TAS2R19P59542 299 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 GNG2P59768 71 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 MRPS15P82914 257 aaKnown RBP3.57□□□□□ -1.84
CKAP4-203ENST00000553039 KLF9Q13886 244 aaPredicted RBP3.57□□□□□ -1.84
CKAP4-203ENST00000553039 IDO2Q6ZQW0 420 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 MOB1BQ7L9L4 216 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 FAM89BQ8N5H3 189 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 GPX8Q8TED1 209 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 RAB40CQ96S21 281 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 GINS3Q9BRX5 216 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 TM2D1Q9BX74 207 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 LPAR5Q9H1C0 372 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 BANF2Q9H503 90 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 IFT46Q9NQC8 304 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 ZNF586Q9NXT0 402 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 XCL2Q9UBD3 114 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 MTFP1Q9UDX5 166 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 RBMX2Q9Y388 322 aaKnown RBP3.57□□□□□ -1.84
CKAP4-203ENST00000553039 OR2W1Q9Y3N9 320 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 RBM7Q9Y580 266 aaKnown RBP3.57□□□□□ -1.84
CKAP4-203ENST00000553039 TRAV9-2A0A087WT02 112 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 A0A087WTM6 91 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 A0A0A6YYD4 124 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 KNCNA6PVL3 124 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 E5RGE8 158 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 MFNGO00587 321 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 HBE1P02100 147 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 AKAIN1P0CW23 69 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 PTHLHP12272 177 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 C4BPBP20851 252 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 FUSP35637 526 aaKnown RBP eCLIP3.56□□□□□ -1.84
CKAP4-203ENST00000553039 CBX5P45973 191 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 EIF2B2P49770 351 aaKnown RBP3.56□□□□□ -1.84
CKAP4-203ENST00000553039 BCAP31P51572 246 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 ARFRP1Q13795 201 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 CDNFQ49AH0 187 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 IGFL4Q6B9Z1 124 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 ZNF705AQ6ZN79 300 aaPredicted RBP3.56□□□□□ -1.84
CKAP4-203ENST00000553039 TMEM229BQ8NBD8 167 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 PPP1R14BQ96C90 147 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 UPK3BQ9BT76 320 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 FAAP24Q9BTP7 215 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 HRASLSQ9HDD0 168 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 NUDT15Q9NV35 164 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 MCUBQ9NWR8 336 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 SDHAF2Q9NX18 166 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 C21orf62Q9NYP8 219 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 RDH8Q9NYR8 311 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 KLK11Q9UBX7 282 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 NSG2Q9Y328 171 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 PRELID3BQ9Y3B1 194 aa3.56□□□□□ -1.84
CKAP4-203ENST00000553039 NACAE9PAV3 2078 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 IGHV3OR16-12A0A075B7B8 117 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 IGHV3OR16-8A0A075B7F1 116 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 IGLV5-52A0A0A0MRZ9 124 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 IGHV3-49A0A0A0MS15 119 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 TRBV6-6A0A0A6YYG2 114 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 TRAV3A0A0B4J244 114 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 IGLV5-39A0A0G2JS06 123 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 A0A0U1RQV1 116 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 MEIS3P1A6NDR6 274 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 FOXI3A8MTJ6 420 aaPredicted RBP3.55□□□□□ -1.84
CKAP4-203ENST00000553039 ZNF705FA8MVS1 300 aaPredicted RBP3.55□□□□□ -1.84
CKAP4-203ENST00000553039 DISC1C4P0D8 188 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 INMT-MINDY4F8WBC2 141 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 SOCS1O15524 211 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 RAB3DO95716 219 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 HRASP01112 189 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 TCRBP04435 133 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 ZNF705DP0CH99 300 aaPredicted RBP3.55□□□□□ -1.84
CKAP4-203ENST00000553039 ZNF705BP0CI00 300 aaPredicted RBP3.55□□□□□ -1.84
CKAP4-203ENST00000553039 SAA1P0DJI8 122 aaPredicted RBP3.55□□□□□ -1.84
CKAP4-203ENST00000553039 BTCP35070 178 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 CCR6P51684 374 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 AP2S1P53680 142 aaPredicted RBP3.55□□□□□ -1.84
CKAP4-203ENST00000553039 LINC00315P59091 139 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 TAS2R46P59540 309 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 RPL8P62917 257 aaKnown RBP3.55□□□□□ -1.84
CKAP4-203ENST00000553039 RRN3P1Q2M238 152 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 Q56UQ5 140 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 RNASE10Q5GAN6 216 aaKnown RBP3.55□□□□□ -1.84
CKAP4-203ENST00000553039 C10orf55Q5SWW7 151 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 STEAP1BQ6NZ63 245 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 ZNF880Q6PDB4 577 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 ERASQ7Z444 233 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 C6orf201Q7Z4U5 140 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 HSD17B13Q7Z5P4 300 aaPredicted RBP3.55□□□□□ -1.84
CKAP4-203ENST00000553039 AKAP14Q86UN6 197 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms