RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 FXYD3Q14802 87 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 ADIPOQQ15848 244 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 PMCHL1Q16048 86 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 RPRMLQ8N4K4 120 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 FAM110DQ8TAY7 271 aaPredicted RBP4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 RND1Q92730 232 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 GPR82Q96P67 336 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 RNF5Q99942 180 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 GFRA4Q9GZZ7 299 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 FNDC4Q9H6D8 234 aaPredicted RBP4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 TNFRSF19Q9NS68 423 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 ZNF492Q9P255 531 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 UQCR10Q9UDW1 63 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 EPDR1Q9UM22 224 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 TBL2Q9Y4P3 447 aaKnown RBP4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 PRR14LQ5THK1 2151 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 CFAP54Q96N23 3096 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 TRBV6-1A0A0K0K1D8 114 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 PGPA6NDG6 321 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 A8MWL6 223 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 E7EUB6 86 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 SPINK4O60575 86 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 HYPMO75409 117 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 TOMM40O96008 361 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 CRYGBP07316 175 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 NBEAP1P0C6P0 100 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 FRMD6-AS1P0C7T7 363 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 SRIP30626 198 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 CTRLP40313 264 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 RPL27AP46776 148 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 MFAP2P55001 183 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 TCL1AP56279 114 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 KRTDAPP60985 99 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 UBE2G1P62253 170 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 MMDQ15546 238 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 MAJINQ3KP22 176 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 KIAA1644Q3SXP7 199 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 TMEM155Q4W5P6 130 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 IGFL4Q6B9Z1 124 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 MRPL54Q6P161 138 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 LINC00305Q7Z4B0 112 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 Q8N976 141 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 C5orf17Q8NAS9 161 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 TMEM116Q8NCL8 245 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 NUP35Q8NFH5 326 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 C8orf46Q8TAG6 207 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 H1FXQ92522 213 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 SNRNP40Q96DI7 357 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 FMC1Q96HJ9 113 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 TMEM68Q96MH6 324 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 SRSF8Q9BRL6 282 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 ATG101Q9BSB4 218 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 FAM103A1Q9BTL3 118 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 PRSS22Q9GZN4 317 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 TMEM14CQ9P0S9 112 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 PEMTQ9UBM1 199 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 RNF24Q9Y225 148 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 PAM16Q9Y3D7 125 aa4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 TNRC18O15417 2968 aaPredicted RBP4.77□□□□□ -1.65
CHMP4A-210ENST00000552620 A0A1B0GXF2 115 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 A0A1W2PPI3 338 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 IGLC7A0M8Q6 106 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 F2Z2F3 143 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 ENSAO43768 121 aaKnown RBP4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 SLC25A17O43808 307 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 HSBP1O75506 76 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 SLC25A5P05141 298 aaKnown RBP4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 C3orf79P0CE67 100 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 IGHV1-8P0DP01 117 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 PYYP10082 97 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 PMCHP20382 165 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 LOXP28300 417 aaPredicted RBP4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 CDKN1AP38936 164 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 REG1BP48304 166 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 MRGPRG-AS1Q2M3A8 158 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 TDRG1Q3Y452 100 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 SPATA45Q537H7 98 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 COL5A1-AS1Q5SY13 56 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 MORN5Q5VZ52 161 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 S100A7AQ86SG5 101 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 NIT1Q86X76 327 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 NHLRC2Q8NBF2 726 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 OR1B1Q8NGR6 318 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 C18orf32Q8TCD1 76 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 CCL17Q92583 94 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 RNASE6Q93091 150 aaKnown RBP4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 CHCHD1Q96BP2 118 aaKnown RBP4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 RITA1Q96K30 269 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 LINC00479Q96M42 142 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 ALKBH7Q9BT30 221 aaPredicted RBP4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 TMEM133Q9H2Q1 129 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 RPP21Q9H633 154 aaKnown RBP4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 OTORQ9NRC9 128 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 C1RLQ9NZP8 487 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 ZNRD1Q9P1U0 126 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 RALYQ9UKM9 306 aaKnown RBP4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 ZNF835Q9Y2P0 537 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 YLPM1P49750 1951 aaKnown RBP4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 GPR179Q6PRD1 2367 aa4.76□□□□□ -1.65
CHMP4A-210ENST00000552620 URB1O60287 2271 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms