RNA–Protein interactions for RNA: ENST00000552610.1

RAB3IP-217, Transcript of RAB3A interacting protein, humanhuman

TSL 2

Gene RAB3IP, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-217ENST00000552610 COX6A1P12074 109 aa1.99□□□□□ -2.09
RAB3IP-217ENST00000552610 KRTAP12-1P59990 96 aa1.99□□□□□ -2.09
RAB3IP-217ENST00000552610 TAF1AQ15573 450 aaPredicted RBP1.99□□□□□ -2.09
RAB3IP-217ENST00000552610 C7orf65Q6ZTY9 151 aa1.99□□□□□ -2.09
RAB3IP-217ENST00000552610 COA5Q86WW8 74 aa1.99□□□□□ -2.09
RAB3IP-217ENST00000552610 CLVS1Q8IUQ0 354 aaPredicted RBP1.99□□□□□ -2.09
RAB3IP-217ENST00000552610 ZNF439Q8NDP4 499 aa1.99□□□□□ -2.09
RAB3IP-217ENST00000552610 WFDC11Q8NEX6 87 aa1.99□□□□□ -2.09
RAB3IP-217ENST00000552610 GPR146Q96CH1 333 aa1.99□□□□□ -2.09
RAB3IP-217ENST00000552610 YIPF3Q9GZM5 350 aa1.99□□□□□ -2.09
RAB3IP-217ENST00000552610 NRAPQ86VF7 1730 aa1.99□□□□□ -2.09
RAB3IP-217ENST00000552610 BCL9O00512 1426 aa1.99□□□□□ -2.09
RAB3IP-217ENST00000552610 RIC1Q4ADV7 1423 aa1.99□□□□□ -2.09
RAB3IP-217ENST00000552610 NUMA1Q14980 2115 aa1.99□□□□□ -2.09
RAB3IP-217ENST00000552610 SBF2Q86WG5 1849 aa1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 AKAP12Q02952 1782 aa1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 NUP188Q5SRE5 1749 aa1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 ABCA3Q99758 1704 aa1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 TNS1Q9HBL0 1735 aaKnown RBP1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 IBA57-AS1B1ANH7 110 aa1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 SMIM17P0DL12 118 aa1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 HSPE1P61604 102 aaKnown RBP1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 ZNF345Q14585 488 aa1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 ARHGAP11BQ3KRB8 267 aa1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 LYRM7Q5U5X0 104 aa1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 DHRS4L2Q6PKH6 230 aa1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 LCN15Q6UWW0 184 aa1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 RPS19BP1Q86WX3 136 aaKnown RBP1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 SLC25A40Q8TBP6 338 aa1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 LHFPL6Q9Y693 200 aa1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 GBF1Q92538 1859 aa1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 CPSF1Q10570 1443 aaKnown RBP1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 SMG6Q86US8 1419 aaKnown RBP1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 RGPD5Q99666 1765 aa1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 NRKQ7Z2Y5 1582 aa1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 ANKRD36BQ8N2N9 1353 aa1.98□□□□□ -2.09
RAB3IP-217ENST00000552610 PDE4DIPQ5VU43 2346 aa1.97□□□□□ -2.09
RAB3IP-217ENST00000552610 PARP4Q9UKK3 1724 aaKnown RBP1.97□□□□□ -2.09
RAB3IP-217ENST00000552610 RREB1Q92766 1687 aa1.97□□□□□ -2.09
RAB3IP-217ENST00000552610 FUOMA2VDF0 154 aa1.97□□□□□ -2.09
RAB3IP-217ENST00000552610 TRAPPC13A5PLN9 417 aa1.97□□□□□ -2.09
RAB3IP-217ENST00000552610 CLPSP04118 112 aa1.97□□□□□ -2.09
RAB3IP-217ENST00000552610 CYBAP13498 195 aa1.97□□□□□ -2.09
RAB3IP-217ENST00000552610 KHDC3LQ587J8 217 aa1.97□□□□□ -2.09
RAB3IP-217ENST00000552610 HACD4Q5VWC8 232 aa1.97□□□□□ -2.09
RAB3IP-217ENST00000552610 GOLT1AQ6ZVE7 132 aa1.97□□□□□ -2.09
RAB3IP-217ENST00000552610 LINC00471Q8N535 108 aa1.97□□□□□ -2.09
RAB3IP-217ENST00000552610 SIGLECL1Q8N7X8 197 aa1.97□□□□□ -2.09
RAB3IP-217ENST00000552610 OR4D11Q8NGI4 311 aa1.97□□□□□ -2.09
RAB3IP-217ENST00000552610 OSTCQ9NRP0 149 aa1.97□□□□□ -2.09
RAB3IP-217ENST00000552610 PHRF1Q9P1Y6 1649 aaKnown RBP1.97□□□□□ -2.09
RAB3IP-217ENST00000552610 NSD3Q9BZ95 1437 aa1.97□□□□□ -2.09
RAB3IP-217ENST00000552610 ADGRB1O14514 1584 aa1.97□□□□□ -2.09
RAB3IP-217ENST00000552610 COL5A3P25940 1745 aaPredicted RBP1.97□□□□□ -2.09
RAB3IP-217ENST00000552610 KIF24Q5T7B8 1368 aa1.97□□□□□ -2.09
RAB3IP-217ENST00000552610 MYOM1P52179 1685 aa1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 RGPD3A6NKT7 1758 aaPredicted RBP1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 RGPD4Q7Z3J3 1758 aa1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 TRBV19A0A075B6N1 114 aa1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 TRGV2A0A075B6R0 118 aa1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 SULT1B1O43704 296 aa1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 GPX2P18283 190 aa1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 Q1T7F1 81 aa1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 LINC01554Q52M75 96 aa1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 FAM173BQ6P4H8 233 aa1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 Q6ZRN7 208 aaPredicted RBP1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 LCA10Q71F78 164 aa1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 TMED4Q7Z7H5 227 aa1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 OR4E2Q8NGC2 313 aa1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 OR5A1Q8NGJ0 315 aa1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 FAM172AQ8WUF8 416 aa1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 NHP2Q9NX24 153 aaKnown RBP1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 ARHGEF28Q8N1W1 1705 aaKnown RBP1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 TONSLQ96HA7 1378 aa1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 LMO7Q8WWI1 1683 aa1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 BTAF1O14981 1849 aa1.96□□□□□ -2.1
RAB3IP-217ENST00000552610 CEP350Q5VT06 3117 aa1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 DOCK3Q8IZD9 2030 aa1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 CRYBG1Q9Y4K1 1723 aa1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 EDC4Q6P2E9 1401 aaKnown RBP1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 GOLGB1Q14789 3259 aaKnown RBP1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 A0A087X0T9 212 aa1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 OR5F1O95221 314 aa1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 RPSAP08865 295 aaKnown RBP1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 S100A5P33763 92 aa1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 RHEBQ15382 184 aa1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 SPANXN5Q5MJ07 72 aa1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 S100A7AQ86SG5 101 aa1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 C9orf163Q8N9P6 203 aa1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 AP3S1Q92572 193 aa1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 PYCARDQ9ULZ3 195 aa1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 EPDR1Q9UM22 224 aa1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 MYH11P35749 1972 aa1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 TOPAZ1Q8N9V7 1692 aa1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 QRICH2Q9H0J4 1663 aa1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 CASZ1Q86V15 1759 aa1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 LRRC37A3O60309 1634 aa1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 TRPM1Q7Z4N2 1603 aa1.95□□□□□ -2.1
RAB3IP-217ENST00000552610 PEAK1Q9H792 1746 aa1.94□□□□□ -2.1
RAB3IP-217ENST00000552610 NHSQ6T4R5 1651 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms