RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 PRSS46E5RG02 174 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 G3V3Q6 166 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 I3L2K1 104 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 L7N2F9 121 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 IFNA10P01566 189 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 PRH1P02810 166 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 FRMD6-AS1P0C7T7 363 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 FCGR2BP31994 310 aaPredicted RBP4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 P2RY1P47900 373 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 TPPP2P59282 170 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 RAB11AP62491 216 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 VAMP2P63027 116 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 RUNX1Q01196 453 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 LRRC37A5PQ49AS3 106 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 SPANXN5Q5MJ07 72 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 KRTAP5-11Q6L8G4 156 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 SLC25A24Q6NUK1 477 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 TMEM14EPQ6UXP3 125 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 C19orf35Q6ZS72 473 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 OR2T35Q8NGX2 323 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 SVIPQ8NHG7 77 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 VN1R17PQ8TDU5 208 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 CXorf58Q96LI9 332 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 MS4A10Q96PG2 267 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 OR4C12Q96R67 309 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 LYRM2Q9NU23 88 aaPredicted RBP4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 OR5AC2Q9NZP5 309 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 STRAPQ9Y3F4 350 aaKnown RBP4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 TSSC4Q9Y5U2 329 aaPredicted RBP4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 SMAD5-AS1Q9Y6J3 95 aa4.87□□□□□ -1.63
DEPDC4-210ENST00000551642 VPS13BQ7Z7G8 4022 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 TRAV14DV4A0A0A6YYC5 116 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 TRBV7-1A0A0A6YYK4 115 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 TCRBV4S1A1TA0A5B7 111 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 IFITM10A6NMD0 228 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 PMS2P5A8MQ11 134 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 FNDC10F2Z333 226 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 H3BP45 60 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 K7EIM0 57 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 OR2J3O76001 311 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 MT-CO2P00403 227 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 IFNA4P05014 189 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 OR8U8P0C7N1 319 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 SLC25A4P12235 298 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 GPX4P36969 197 aaPredicted RBP4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 AMTP48728 403 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 ATP5G2Q06055 141 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 C15orf32Q32M92 178 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 DGAT2L7PQ6IED9 249 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 ETFRF1Q6IPR1 90 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 ZNF343Q6P1L6 599 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 TCTE3Q8IZS6 198 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 TMEM252Q8N6L7 170 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 TMEM116Q8NCL8 245 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 THAP6Q8TBB0 222 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 ZNF502Q8TBZ5 544 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 C4orf3Q8WVX3 66 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 CACNG8Q8WXS5 425 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 ST6GAL2Q96JF0 529 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 TXN2Q99757 166 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 GGACTQ9BVM4 153 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 SLC25A31Q9H0C2 315 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 RANGRFQ9HD47 186 aaPredicted RBP4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 MBD2Q9UBB5 411 aa4.86□□□□□ -1.63
DEPDC4-210ENST00000551642 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 IGSF23A1L1A6 192 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 MFSD2BA6NFX1 497 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 FAM24AA6NFZ4 105 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 I3L521 148 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 CCNKO75909 580 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 LGALS1P09382 135 aaKnown RBP4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 METTL15P1P0C7V9 234 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 S100A11P31949 105 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 OPRK1P41145 380 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 SULT1A1P50225 295 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 CAV2P51636 162 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 MFAP4P55083 255 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 EWSR1Q01844 656 aaKnown RBP eCLIP4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 BAXQ07812 192 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 Q5BKY6 102 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 ZNF546Q86UE3 836 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 AKAP14Q86UN6 197 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 HAPLN4Q86UW8 402 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 STX12Q86Y82 276 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 OR10P1Q8NGE3 313 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 EEF1AKMT3Q96AZ1 226 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 PINX1Q96BK5 328 aaKnown RBP4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 AQP10Q96PS8 301 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 FNDC4Q9H6D8 234 aaPredicted RBP4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 GNB4Q9HAV0 340 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 C21orf62Q9NYP8 219 aa4.85□□□□□ -1.63
DEPDC4-210ENST00000551642 TRAV30A0A087WSZ9 112 aa4.84□□□□□ -1.63
DEPDC4-210ENST00000551642 HMSDA8MTL9 139 aa4.84□□□□□ -1.63
DEPDC4-210ENST00000551642 CST7O76096 145 aa4.84□□□□□ -1.63
DEPDC4-210ENST00000551642 IGHV3-11P01762 117 aa4.84□□□□□ -1.63
DEPDC4-210ENST00000551642 C1QBP02746 253 aa4.84□□□□□ -1.63
DEPDC4-210ENST00000551642 HSPB1P04792 205 aaKnown RBP4.84□□□□□ -1.63
DEPDC4-210ENST00000551642 RPL12P30050 165 aaKnown RBP4.84□□□□□ -1.63
DEPDC4-210ENST00000551642 HBG1P69891 147 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms