RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 RAB11AP62491 216 aa9.43□□□□□ -0.9
NPAS3-209ENST00000551008 SPANXN5Q5MJ07 72 aa9.43□□□□□ -0.9
NPAS3-209ENST00000551008 MORN3Q6PF18 240 aaPredicted RBP9.43□□□□□ -0.9
NPAS3-209ENST00000551008 ACOT7LQ6ZUV0 252 aa9.43□□□□□ -0.9
NPAS3-209ENST00000551008 CIB3Q96Q77 187 aaPredicted RBP9.43□□□□□ -0.9
NPAS3-209ENST00000551008 PAIP2BQ9ULR5 123 aaKnown RBP9.43□□□□□ -0.9
NPAS3-209ENST00000551008 DNAH10Q8IVF4 4471 aa9.43□□□□□ -0.9
NPAS3-209ENST00000551008 ELOA3CA0A087WX78 387 aaPredicted RBP9.42□□□□□ -0.9
NPAS3-209ENST00000551008 HLA-DRB4P13762 266 aa9.42□□□□□ -0.9
NPAS3-209ENST00000551008 TMEM217Q8N7C4 229 aa9.42□□□□□ -0.9
NPAS3-209ENST00000551008 C7orf50Q9BRJ6 194 aaKnown RBP9.42□□□□□ -0.9
NPAS3-209ENST00000551008 RCL1Q9Y2P8 373 aaKnown RBP9.42□□□□□ -0.9
NPAS3-209ENST00000551008 HLA-DRB4X5D2U9 266 aa9.42□□□□□ -0.9
NPAS3-209ENST00000551008 NKX2-1P43699 371 aaPredicted RBP9.41□□□□□ -0.9
NPAS3-209ENST00000551008 INPP1P49441 399 aa9.41□□□□□ -0.9
NPAS3-209ENST00000551008 C1orf194Q5T5A4 169 aa9.41□□□□□ -0.9
NPAS3-209ENST00000551008 TMEM14EPQ6UXP3 125 aa9.41□□□□□ -0.9
NPAS3-209ENST00000551008 C11orf45Q8TAV5 145 aa9.41□□□□□ -0.9
NPAS3-209ENST00000551008 MITD1Q8WV92 249 aa9.41□□□□□ -0.9
NPAS3-209ENST00000551008 C20orf173Q96LM9 149 aa9.41□□□□□ -0.9
NPAS3-209ENST00000551008 C20orf85Q9H1P6 137 aa9.41□□□□□ -0.9
NPAS3-209ENST00000551008 SLC25A32Q9H2D1 315 aa9.41□□□□□ -0.9
NPAS3-209ENST00000551008 STRAPQ9Y3F4 350 aaKnown RBP9.41□□□□□ -0.9
NPAS3-209ENST00000551008 SNRPGP15A8MWD9 76 aa9.4□□□□□ -0.9
NPAS3-209ENST00000551008 SSSCA1O60232 199 aa9.4□□□□□ -0.9
NPAS3-209ENST00000551008 NUP62P37198 522 aaPredicted RBP9.4□□□□□ -0.9
NPAS3-209ENST00000551008 SNRPD3P62318 126 aaKnown RBP9.4□□□□□ -0.9
NPAS3-209ENST00000551008 ARL16Q0P5N6 197 aa9.4□□□□□ -0.9
NPAS3-209ENST00000551008 TMEM144Q7Z5S9 345 aa9.4□□□□□ -0.9
NPAS3-209ENST00000551008 ZBTB8BQ8NAP8 495 aaPredicted RBP9.4□□□□□ -0.9
NPAS3-209ENST00000551008 COQ8AQ8NI60 647 aa9.4□□□□□ -0.9
NPAS3-209ENST00000551008 SMIM8Q96KF7 97 aa9.4□□□□□ -0.9
NPAS3-209ENST00000551008 PSENENQ9NZ42 101 aa9.4□□□□□ -0.9
NPAS3-209ENST00000551008 CELA1Q9UNI1 258 aa9.4□□□□□ -0.9
NPAS3-209ENST00000551008 ZNF98A6NK75 572 aa9.39□□□□□ -0.91
NPAS3-209ENST00000551008 F6UB75 175 aa9.39□□□□□ -0.91
NPAS3-209ENST00000551008 CCSO14618 274 aa9.39□□□□□ -0.91
NPAS3-209ENST00000551008 LYRM1O43325 122 aa9.39□□□□□ -0.91
NPAS3-209ENST00000551008 LY6G6CO95867 125 aa9.39□□□□□ -0.91
NPAS3-209ENST00000551008 PSMB3P49720 205 aa9.39□□□□□ -0.91
NPAS3-209ENST00000551008 IAH1Q2TAA2 248 aaPredicted RBP9.39□□□□□ -0.91
NPAS3-209ENST00000551008 C4orf46Q504U0 113 aa9.39□□□□□ -0.91
NPAS3-209ENST00000551008 TMEM41BQ5BJD5 291 aa9.39□□□□□ -0.91
NPAS3-209ENST00000551008 ZNF709Q8N972 641 aa9.39□□□□□ -0.91
NPAS3-209ENST00000551008 SCRT1Q9BWW7 348 aa9.39□□□□□ -0.91
NPAS3-209ENST00000551008 SAV1Q9H4B6 383 aaPredicted RBP9.39□□□□□ -0.91
NPAS3-209ENST00000551008 C11orf1Q9H5F2 150 aa9.39□□□□□ -0.91
NPAS3-209ENST00000551008 XCL2Q9UBD3 114 aa9.39□□□□□ -0.91
NPAS3-209ENST00000551008 FBXL17Q9UF56 701 aa9.39□□□□□ -0.91
NPAS3-209ENST00000551008 A8MTW9 85 aa9.38□□□□□ -0.91
NPAS3-209ENST00000551008 H3BRN7 92 aa9.38□□□□□ -0.91
NPAS3-209ENST00000551008 MBPP02686 304 aaPredicted RBP9.38□□□□□ -0.91
NPAS3-209ENST00000551008 TCRBP04435 133 aa9.38□□□□□ -0.91
NPAS3-209ENST00000551008 FABP1P07148 127 aa9.38□□□□□ -0.91
NPAS3-209ENST00000551008 METTL15P1P0C7V9 234 aa9.38□□□□□ -0.91
NPAS3-209ENST00000551008 MIFP14174 115 aa9.38□□□□□ -0.91
NPAS3-209ENST00000551008 RPP30P78346 268 aaKnown RBP9.38□□□□□ -0.91
NPAS3-209ENST00000551008 AKR1C1Q04828 323 aa9.38□□□□□ -0.91
NPAS3-209ENST00000551008 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.38□□□□□ -0.91
NPAS3-209ENST00000551008 ZNF705AQ6ZN79 300 aaPredicted RBP9.38□□□□□ -0.91
NPAS3-209ENST00000551008 CYP2G1PQ6ZSU1 146 aa9.38□□□□□ -0.91
NPAS3-209ENST00000551008 SEC22CQ9BRL7 303 aa9.38□□□□□ -0.91
NPAS3-209ENST00000551008 HRH4Q9H3N8 390 aa9.38□□□□□ -0.91
NPAS3-209ENST00000551008 NDUFA13Q9P0J0 144 aa9.38□□□□□ -0.91
NPAS3-209ENST00000551008 TBC1D24Q9ULP9 559 aa9.38□□□□□ -0.91
NPAS3-209ENST00000551008 SLC45A2Q9UMX9 530 aa9.38□□□□□ -0.91
NPAS3-209ENST00000551008 KLK5Q9Y337 293 aaPredicted RBP9.38□□□□□ -0.91
NPAS3-209ENST00000551008 TRAV8-2A0A0B4J237 113 aa9.37□□□□□ -0.91
NPAS3-209ENST00000551008 CENPXA8MT69 81 aa9.37□□□□□ -0.91
NPAS3-209ENST00000551008 ZNF705FA8MVS1 300 aaPredicted RBP9.37□□□□□ -0.91
NPAS3-209ENST00000551008 ISLRO14498 428 aa9.37□□□□□ -0.91
NPAS3-209ENST00000551008 IFNA21P01568 189 aa9.37□□□□□ -0.91
NPAS3-209ENST00000551008 IGKV3-20P01619 116 aa9.37□□□□□ -0.91
NPAS3-209ENST00000551008 ZNF705DP0CH99 300 aaPredicted RBP9.37□□□□□ -0.91
NPAS3-209ENST00000551008 ZNF705BP0CI00 300 aaPredicted RBP9.37□□□□□ -0.91
NPAS3-209ENST00000551008 ORM2P19652 201 aa9.37□□□□□ -0.91
NPAS3-209ENST00000551008 FXYD7P58549 80 aa9.37□□□□□ -0.91
NPAS3-209ENST00000551008 PLP1P60201 277 aa9.37□□□□□ -0.91
NPAS3-209ENST00000551008 RRAS2P62070 204 aaPredicted RBP9.37□□□□□ -0.91
NPAS3-209ENST00000551008 DLK1P80370 383 aa9.37□□□□□ -0.91
NPAS3-209ENST00000551008 FOXI2Q6ZQN5 318 aa9.37□□□□□ -0.91
NPAS3-209ENST00000551008 OR8I2Q8N0Y5 310 aa9.37□□□□□ -0.91
NPAS3-209ENST00000551008 RPP25LQ8N5L8 163 aaKnown RBP9.37□□□□□ -0.91
NPAS3-209ENST00000551008 LINC00052Q96N35 136 aa9.37□□□□□ -0.91
NPAS3-209ENST00000551008 CLUHP3Q96NS8 147 aa9.37□□□□□ -0.91
NPAS3-209ENST00000551008 MFFQ9GZY8 342 aa9.37□□□□□ -0.91
NPAS3-209ENST00000551008 SLC35B3Q9H1N7 401 aa9.37□□□□□ -0.91
NPAS3-209ENST00000551008 SLC25A22Q9H936 323 aa9.37□□□□□ -0.91
NPAS3-209ENST00000551008 TRAV6A0A075B6T7 132 aa9.36□□□□□ -0.91
NPAS3-209ENST00000551008 A0A0J9YX75 114 aa9.36□□□□□ -0.91
NPAS3-209ENST00000551008 C7orf66A4D0T2 115 aa9.36□□□□□ -0.91
NPAS3-209ENST00000551008 K7EPK0 472 aa9.36□□□□□ -0.91
NPAS3-209ENST00000551008 TSC22D2O75157 780 aa9.36□□□□□ -0.91
NPAS3-209ENST00000551008 DEDDO75618 318 aa9.36□□□□□ -0.91
NPAS3-209ENST00000551008 SCGB1D2O95969 90 aa9.36□□□□□ -0.91
NPAS3-209ENST00000551008 CFDP00746 253 aaPredicted RBP9.36□□□□□ -0.91
NPAS3-209ENST00000551008 HLA-DMBP28068 263 aa9.36□□□□□ -0.91
NPAS3-209ENST00000551008 TAS2R30P59541 319 aa9.36□□□□□ -0.91
NPAS3-209ENST00000551008 IGFL4Q6B9Z1 124 aa9.36□□□□□ -0.91
NPAS3-209ENST00000551008 AMTNQ6UX39 209 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms